RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 OR8J3Q8NGG0 315 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 OR51A4Q8NGJ6 313 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 CLEC2BQ92478 149 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 OR4C12Q96R67 309 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 DYNLRB1Q9NP97 96 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 CBLN4Q9NTU7 201 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 FKBP11Q9NYL4 201 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 TNFSF18Q9UNG2 199 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 TPRKBQ9Y3C4 175 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 ZNF469Q96JG9 3925 aaPredicted RBP0.71□□□□□ -2.3
TARDBP-214ENST00000613177 NOTCH1P46531 2555 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 UBR5O95071 2799 aaPredicted RBP0.71□□□□□ -2.3
TARDBP-214ENST00000613177 ZNF462Q96JM2 2506 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 NBPF19A0A087WUL8 3843 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 TACC2O95359 2948 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 ZFHX3Q15911 3703 aa0.71□□□□□ -2.3
TARDBP-214ENST00000613177 APCP25054 2843 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 NAV3Q8IVL0 2385 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 DNHD1Q96M86 4753 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 ZFYVE26Q68DK2 2539 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 GCN1Q92616 2671 aaKnown RBP0.7□□□□□ -2.3
TARDBP-214ENST00000613177 LOC107984640A0A0U1RRK4 108 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 IQCF6A8MYZ5 107 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 JMJD7-PLA2G4BH0Y9G9 81 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 J3QLW9 94 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 M0QZK8 103 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 M0R135 149 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 GNGT2O14610 69 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 PIPP12273 146 aaPredicted RBP0.7□□□□□ -2.3
TARDBP-214ENST00000613177 DEFA5Q01523 94 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 DEFB112Q30KQ8 113 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 TMEM128Q5BJH2 165 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 C10orf128Q5T292 105 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 C12orf73Q69YU5 71 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 LINC00305Q7Z4B0 112 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 LINC00269Q8N2A0 174 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 OTOSQ8NHW6 89 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 ZNF431Q8TF32 576 aaPredicted RBP0.7□□□□□ -2.3
TARDBP-214ENST00000613177 MAFIPQ8WZ33 124 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 LZICQ8WZA0 190 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 LEAP2Q969E1 77 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 PRELID3AQ96N28 172 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 GAFA1Q96PS6 74 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 BANF2Q9H503 90 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 CMC2Q9NRP2 79 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 C19orf12Q9NSK7 152 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 LAMTOR2Q9Y2Q5 125 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 AP4S1Q9Y587 144 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 CFAP46Q8IYW2 2715 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 CHD6Q8TD26 2715 aa0.7□□□□□ -2.3
TARDBP-214ENST00000613177 ANK3Q12955 4377 aaKnown RBP0.7□□□□□ -2.3
TARDBP-214ENST00000613177 ABCA1O95477 2261 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 SPTBN1Q01082 2364 aaKnown RBP0.69□□□□□ -2.3
TARDBP-214ENST00000613177 FASNP49327 2511 aaKnown RBP0.69□□□□□ -2.3
TARDBP-214ENST00000613177 ROS1P08922 2347 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.69□□□□□ -2.3
TARDBP-214ENST00000613177 LOC100130705A0A1B0GUX0 176 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 LOC107986453A0A1B0GWG9 222 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 PIN1P1O15428 100 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 PFDN1O60925 122 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 IGLV3-1P01715 115 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
TARDBP-214ENST00000613177 CAV3P56539 151 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 EDDM3BP56851 147 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 RPS25P62851 125 aaKnown RBP0.69□□□□□ -2.3
TARDBP-214ENST00000613177 UBA52P62987 128 aaKnown RBP0.69□□□□□ -2.3
TARDBP-214ENST00000613177 PSPHP78330 225 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 OR8B8Q15620 311 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 PIGYQ3MUY2 71 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 TMEM91Q6ZNR0 172 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 VMO1Q7Z5L0 202 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 OR4S1Q8NGB4 309 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 OR4B1Q8NGF8 309 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 BRK1Q8WUW1 75 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 TMEM203Q969S6 136 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 CST11Q9H112 138 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 GNG8Q9UK08 70 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 HILPDAQ9Y5L2 63 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 V9GYS6 101 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 VPS13CQ709C8 3753 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 SPTA1P02549 2419 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 USP9XQ93008 2570 aaPredicted RBP0.69□□□□□ -2.3
TARDBP-214ENST00000613177 ZANQ9Y493 2812 aa0.69□□□□□ -2.3
TARDBP-214ENST00000613177 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.69□□□□□ -2.31e-41■■■■■ 46.1
TARDBP-214ENST00000613177 HIVEP1P15822 2718 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 TLN1Q9Y490 2541 aaKnown RBP0.68□□□□□ -2.3
TARDBP-214ENST00000613177 TRAV13-1A0A0B4J241 112 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 C3orf85A0A1B0GTC6 90 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 ZNF670-ZNF695F2Z2N8 137 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 H3BUX3 64 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 NPFFO15130 113 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 OR2H2O95918 312 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 IGF2P01344 180 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 HMGN1P05114 100 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 APELAP0DMC3 54 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 GUCA1AP43080 201 aaPredicted RBP0.68□□□□□ -2.3
TARDBP-214ENST00000613177 SRP9P49458 86 aaKnown RBP0.68□□□□□ -2.3
TARDBP-214ENST00000613177 NDUFA6P56556 154 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 SMIM11AP58511 58 aa0.68□□□□□ -2.3
TARDBP-214ENST00000613177 PCBD1P61457 104 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms