RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 INAFM1C9JVW0 142 aa11.77□□□□□ -0.52
RTN1-209ENST00000611068 H3BT86 120 aa11.77□□□□□ -0.52
RTN1-209ENST00000611068 JMJD1CQ15652 2540 aa11.77□□□□□ -0.53
RTN1-209ENST00000611068 J3QQQ9 107 aa11.77□□□□□ -0.53
RTN1-209ENST00000611068 AGPAT4-IT1Q9H0P7 198 aa11.77□□□□□ -0.53
RTN1-209ENST00000611068 TMEM223A0PJW6 202 aa11.76□□□□□ -0.53
RTN1-209ENST00000611068 SUMO2P61956 95 aaKnown RBP11.76□□□□□ -0.53
RTN1-209ENST00000611068 NSUN5P1Q3KNT7 163 aa11.76□□□□□ -0.53
RTN1-209ENST00000611068 UBE2E2Q96LR5 201 aa11.76□□□□□ -0.53
RTN1-209ENST00000611068 Q8N2B8 174 aa11.76□□□□□ -0.53
RTN1-209ENST00000611068 LINC00477Q96M19 166 aa11.76□□□□□ -0.53
RTN1-209ENST00000611068 ZNF580Q9UK33 172 aa11.76□□□□□ -0.53
RTN1-209ENST00000611068 CD28P10747 220 aa11.75□□□□□ -0.53
RTN1-209ENST00000611068 FAM19A4Q96LR4 140 aa11.75□□□□□ -0.53
RTN1-209ENST00000611068 SLC50A1Q9BRV3 221 aa11.75□□□□□ -0.53
RTN1-209ENST00000611068 NSD1Q96L73 2696 aaPredicted RBP11.75□□□□□ -0.53
RTN1-209ENST00000611068 TRACP01848 142 aa11.74□□□□□ -0.53
RTN1-209ENST00000611068 LGALS3P17931 250 aaKnown RBP11.74□□□□□ -0.53
RTN1-209ENST00000611068 RNF152Q8N8N0 203 aa11.74□□□□□ -0.53
RTN1-209ENST00000611068 SPANXN1Q5VSR9 72 aa11.74□□□□□ -0.53
RTN1-209ENST00000611068 MRAPQ8TCY5 172 aa11.74□□□□□ -0.53
RTN1-209ENST00000611068 ICOSQ9Y6W8 199 aa11.74□□□□□ -0.53
RTN1-209ENST00000611068 IGHV3-64A0A075B6Q5 118 aa11.73□□□□□ -0.53
RTN1-209ENST00000611068 IGKV3-20P01619 116 aa11.73□□□□□ -0.53
RTN1-209ENST00000611068 TMEM86BQ8N661 226 aa11.73□□□□□ -0.53
RTN1-209ENST00000611068 LINC01006Q8NI28 216 aa11.73□□□□□ -0.53
RTN1-209ENST00000611068 TRAV8-3A0A0A6YYJ7 113 aa11.72□□□□□ -0.53
RTN1-209ENST00000611068 TMEM89A2RUT3 159 aa11.72□□□□□ -0.53
RTN1-209ENST00000611068 LINC00643Q86TS7 51 aa11.72□□□□□ -0.53
RTN1-209ENST00000611068 SOCS3O14543 225 aa11.72□□□□□ -0.53
RTN1-209ENST00000611068 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.71□□□□□ -0.53
RTN1-209ENST00000611068 ATP5G1P05496 136 aa11.71□□□□□ -0.54
RTN1-209ENST00000611068 C5orf38Q86SI9 138 aa11.71□□□□□ -0.54
RTN1-209ENST00000611068 JPT2Q9H910 190 aa11.71□□□□□ -0.54
RTN1-209ENST00000611068 TEP1Q99973 2627 aaKnown RBP11.7□□□□□ -0.54
RTN1-209ENST00000611068 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
RTN1-209ENST00000611068 RHOHQ15669 191 aa11.7□□□□□ -0.54
RTN1-209ENST00000611068 PRR9Q5T870 116 aa11.7□□□□□ -0.54
RTN1-209ENST00000611068 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
RTN1-209ENST00000611068 K7EMT4 169 aa11.7□□□□□ -0.54
RTN1-209ENST00000611068 TP53TG1Q9Y2A0 90 aa11.7□□□□□ -0.54
RTN1-209ENST00000611068 LST1O00453 97 aa11.69□□□□□ -0.54
RTN1-209ENST00000611068 PYGO1Q9Y3Y4 419 aa11.69□□□□□ -0.54
RTN1-209ENST00000611068 F8P00451 2351 aa11.69□□□□□ -0.54
RTN1-209ENST00000611068 RNASE1P07998 156 aaKnown RBP11.69□□□□□ -0.54
RTN1-209ENST00000611068 TMEM258P61165 79 aa11.69□□□□□ -0.54
RTN1-209ENST00000611068 DCANP1Q8TF63 244 aa11.69□□□□□ -0.54
RTN1-209ENST00000611068 ADARB2-AS1A8MUL3 147 aa11.68□□□□□ -0.54
RTN1-209ENST00000611068 IGIPA6NJ69 53 aa11.68□□□□□ -0.54
RTN1-209ENST00000611068 RS1O15537 224 aa11.68□□□□□ -0.54
RTN1-209ENST00000611068 HILS1P60008 231 aa11.68□□□□□ -0.54
RTN1-209ENST00000611068 PAPPA-AS1Q5QFB9 102 aa11.68□□□□□ -0.54
RTN1-209ENST00000611068 C4orf3Q8WVX3 66 aa11.68□□□□□ -0.54
RTN1-209ENST00000611068 TENM1Q9UKZ4 2725 aa11.67□□□□□ -0.54
RTN1-209ENST00000611068 F8WDY8 70 aa11.67□□□□□ -0.54
RTN1-209ENST00000611068 ACYP1P07311 99 aa11.67□□□□□ -0.54
RTN1-209ENST00000611068 M0R381 172 aa11.67□□□□□ -0.54
RTN1-209ENST00000611068 I3L3M4 83 aa11.66□□□□□ -0.54
RTN1-209ENST00000611068 HIST1H4AP62805 103 aaKnown RBP11.66□□□□□ -0.54
RTN1-209ENST00000611068 SPANXCQ9NY87 97 aa11.66□□□□□ -0.54
RTN1-209ENST00000611068 PRSS2P07478 247 aa11.66□□□□□ -0.54
RTN1-209ENST00000611068 MGPP08493 103 aa11.66□□□□□ -0.54
RTN1-209ENST00000611068 RNASE4P34096 147 aaKnown RBP11.66□□□□□ -0.54
RTN1-209ENST00000611068 NPC2P61916 151 aa11.66□□□□□ -0.54
RTN1-209ENST00000611068 IGHV4-4A0A075B6R2 117 aa11.65□□□□□ -0.54
RTN1-209ENST00000611068 C9orf47Q6ZRZ4 202 aa11.65□□□□□ -0.54
RTN1-209ENST00000611068 COX6CP09669 75 aa11.65□□□□□ -0.54
RTN1-209ENST00000611068 SPANXDQ9BXN6 97 aa11.65□□□□□ -0.54
RTN1-209ENST00000611068 VWFP04275 2813 aa11.64□□□□□ -0.55
RTN1-209ENST00000611068 TRAV13-1A0A0B4J241 112 aa11.64□□□□□ -0.55
RTN1-209ENST00000611068 ATOX1O00244 68 aa11.64□□□□□ -0.55
RTN1-209ENST00000611068 UPK3BQ9BT76 320 aa11.64□□□□□ -0.55
RTN1-209ENST00000611068 BAHCC1Q9P281 2608 aa11.64□□□□□ -0.55
RTN1-209ENST00000611068 NOTCH3Q9UM47 2321 aa11.64□□□□□ -0.55
RTN1-209ENST00000611068 SDIM1Q6ZPB5 146 aa11.64□□□□□ -0.55
RTN1-209ENST00000611068 LINC00336Q6ZUF6 198 aa11.64□□□□□ -0.55
RTN1-209ENST00000611068 OPRPNQ99935 248 aaPredicted RBP11.64□□□□□ -0.55
RTN1-209ENST00000611068 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
RTN1-209ENST00000611068 A0A0J9YXY3 114 aa11.63□□□□□ -0.55
RTN1-209ENST00000611068 CCL24O00175 119 aa11.63□□□□□ -0.55
RTN1-209ENST00000611068 LEPROTO15243 131 aa11.63□□□□□ -0.55
RTN1-209ENST00000611068 CXCL5P42830 114 aa11.63□□□□□ -0.55
RTN1-209ENST00000611068 ZNF876PQ49A33 203 aa11.63□□□□□ -0.55
RTN1-209ENST00000611068 TMEM61Q8N0U2 210 aa11.63□□□□□ -0.55
RTN1-209ENST00000611068 C1orf43Q9BWL3 253 aa11.63□□□□□ -0.55
RTN1-209ENST00000611068 TRAV12-3A0A0B4J271 114 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 ADAMTSL4-AS1Q5T5F5 129 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 DYNLRB2Q8TF09 96 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 MRPL53Q96EL3 112 aaKnown RBP11.62□□□□□ -0.55
RTN1-209ENST00000611068 LITAFQ99732 161 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 DPH3P1Q9H4G8 78 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 ATRQ13535 2644 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 KNCNA6PVL3 124 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 RPL35AP18077 110 aaKnown RBP11.62□□□□□ -0.55
RTN1-209ENST00000611068 ZFAND2AQ8N6M9 145 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 TIMM21Q9BVV7 248 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 PKIGQ9Y2B9 76 aa11.62□□□□□ -0.55
RTN1-209ENST00000611068 MALP21145 153 aa11.61□□□□□ -0.55
RTN1-209ENST00000611068 K7EQG2 157 aa11.61□□□□□ -0.55
RTN1-209ENST00000611068 KRTAP10-3P60369 221 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms