RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 C1orf158Q8N1D5 194 aa9.36□□□□□ -0.91
SRGAP2-209ENST00000604247 GCN1Q92616 2671 aaKnown RBP9.35□□□□□ -0.91
SRGAP2-209ENST00000604247 NPC2P61916 151 aa9.35□□□□□ -0.91
SRGAP2-209ENST00000604247 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
SRGAP2-209ENST00000604247 TEN1Q86WV5 123 aa9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 STHQ8IWL8 128 aa9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 FHL3Q13643 280 aa9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 CDKN2A-AS1Q9UH64 79 aa9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 FASNP49327 2511 aaKnown RBP9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 SETXQ7Z333 2677 aaKnown RBP9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 HECTD1Q9ULT8 2610 aa9.34□□□□□ -0.91
SRGAP2-209ENST00000604247 TRGV1A0A0A0MS02 117 aa9.33□□□□□ -0.92
SRGAP2-209ENST00000604247 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.33□□□□□ -0.92
SRGAP2-209ENST00000604247 DNAJC9-AS1A6NH13 148 aa9.33□□□□□ -0.92
SRGAP2-209ENST00000604247 Q1RN00 199 aa9.33□□□□□ -0.92
SRGAP2-209ENST00000604247 C9JAW5 83 aa9.33□□□□□ -0.92
SRGAP2-209ENST00000604247 ESM1Q9NQ30 184 aa9.33□□□□□ -0.92
SRGAP2-209ENST00000604247 COX6A2Q02221 97 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 KRTAP1-1Q07627 177 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 DGAT2L7PQ6IED9 249 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 ANKRD29Q8N6D5 301 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 PPDPFLQ8WWR9 84 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 CDIP1Q9H305 208 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 JMJD1CQ15652 2540 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 C2CD3Q4AC94 2353 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 CCL24O00175 119 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 LINC00694P0DN24 101 aa9.32□□□□□ -0.92
SRGAP2-209ENST00000604247 SLC25A20O43772 301 aa9.31□□□□□ -0.92
SRGAP2-209ENST00000604247 NDUFA7O95182 113 aa9.31□□□□□ -0.92
SRGAP2-209ENST00000604247 Q6ZTI0 123 aa9.31□□□□□ -0.92
SRGAP2-209ENST00000604247 DAND5Q8N907 189 aa9.31□□□□□ -0.92
SRGAP2-209ENST00000604247 CLUHP3Q96NS8 147 aa9.31□□□□□ -0.92
SRGAP2-209ENST00000604247 ZFAND6Q6FIF0 208 aa9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 TMEM86BQ8N661 226 aa9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 TMEM101Q96IK0 257 aa9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 SPANXDQ9BXN6 97 aa9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 SPANXCQ9NY87 97 aa9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 TRAV25A0A0B4J276 109 aa9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 TRIAP1O43715 76 aa9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 MIAQ16674 131 aa9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 IL17DQ8TAD2 202 aa9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 CITED2Q99967 270 aaPredicted RBP9.3□□□□□ -0.92
SRGAP2-209ENST00000604247 SCGB1A1P11684 91 aa9.29□□□□□ -0.92
SRGAP2-209ENST00000604247 TIRAPP58753 221 aa9.29□□□□□ -0.92
SRGAP2-209ENST00000604247 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
SRGAP2-209ENST00000604247 NOTCH2Q04721 2471 aa9.29□□□□□ -0.92
SRGAP2-209ENST00000604247 TRBV30A0A0K0K1B3 111 aa9.28□□□□□ -0.92
SRGAP2-209ENST00000604247 LINC00242Q5T6M2 205 aa9.28□□□□□ -0.92
SRGAP2-209ENST00000604247 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
SRGAP2-209ENST00000604247 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
SRGAP2-209ENST00000604247 ZNF625Q96I27 306 aaPredicted RBP9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 NOP10Q9NPE3 64 aaKnown RBP9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 GAGE12JA6NER3 117 aa9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 PLA2G2AP14555 144 aa9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 RPL36AP83881 106 aaKnown RBP9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 GAGE4Q13068 117 aa9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 GAGE5Q13069 117 aa9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 ATXN8Q156A1 80 aa9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 LINC01620Q4KN68 170 aa9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 RPL36ALQ969Q0 106 aaKnown RBP9.27□□□□□ -0.93
SRGAP2-209ENST00000604247 TRAV13-1A0A0B4J241 112 aa9.26□□□□□ -0.93
SRGAP2-209ENST00000604247 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
SRGAP2-209ENST00000604247 K7EQD1 137 aa9.26□□□□□ -0.93
SRGAP2-209ENST00000604247 MT-ATP8P03928 68 aa9.26□□□□□ -0.93
SRGAP2-209ENST00000604247 GIG44P09565 113 aaPredicted RBP9.26□□□□□ -0.93
SRGAP2-209ENST00000604247 XGP55808 180 aa9.26□□□□□ -0.93
SRGAP2-209ENST00000604247 ICOSQ9Y6W8 199 aa9.26□□□□□ -0.93
SRGAP2-209ENST00000604247 NDUFA1O15239 70 aa9.26□□□□□ -0.93
SRGAP2-209ENST00000604247 Q9H8V8 135 aa9.25□□□□□ -0.93
SRGAP2-209ENST00000604247 OTOGQ6ZRI0 2925 aa9.25□□□□□ -0.93
SRGAP2-209ENST00000604247 HERVK_113P63121 156 aa9.25□□□□□ -0.93
SRGAP2-209ENST00000604247 LINC01006Q8NI28 216 aa9.25□□□□□ -0.93
SRGAP2-209ENST00000604247 TRAV4A0A0B4J268 109 aa9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 NTN5Q8WTR8 489 aaPredicted RBP9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 IGLV5-39A0A0G2JS06 123 aa9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 TRBV10-1A0A0K0K1A3 114 aa9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 TIMM17BO60830 172 aa9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 RPL35AP18077 110 aaKnown RBP9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 DAZ2Q13117 558 aaKnown RBP9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 CLEC2BQ92478 149 aa9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 YAE1D1Q9NRH1 226 aa9.24□□□□□ -0.93
SRGAP2-209ENST00000604247 SMIM1B2RUZ4 78 aa9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 CDC42SE2Q9NRR3 84 aa9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 LOC100131303A0A0U1RQF7 123 aa9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 PLAC8L1A1L4L8 177 aa9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 M0QXV9 152 aa9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 GAGE7O76087 117 aa9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 GAGE12FP0CL80 117 aa9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 GAGE12GP0CL81 117 aa9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 GAGE12IP0CL82 117 aa9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 CSDC2Q9Y534 153 aaKnown RBP9.23□□□□□ -0.93
SRGAP2-209ENST00000604247 IFITM1P13164 125 aa9.22□□□□□ -0.93
SRGAP2-209ENST00000604247 RPL13AP40429 203 aaKnown RBP9.22□□□□□ -0.93
SRGAP2-209ENST00000604247 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
SRGAP2-209ENST00000604247 VWFP04275 2813 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms