RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 Q9H8V8 135 aa11.2□□□□□ -0.62
FGFR2-222ENST00000604236 ERG28Q9UKR5 140 aa11.2□□□□□ -0.62
FGFR2-222ENST00000604236 IGLV4-69A0A075B6H9 119 aa11.2□□□□□ -0.62
FGFR2-222ENST00000604236 XCL1P47992 114 aa11.19□□□□□ -0.62
FGFR2-222ENST00000604236 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
FGFR2-222ENST00000604236 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
FGFR2-222ENST00000604236 PRB2P02812 416 aaPredicted RBP11.19□□□□□ -0.62
FGFR2-222ENST00000604236 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
FGFR2-222ENST00000604236 RHODO00212 210 aa11.18□□□□□ -0.62
FGFR2-222ENST00000604236 SIVA1O15304 175 aa11.18□□□□□ -0.62
FGFR2-222ENST00000604236 LINC00158P58513 81 aa11.18□□□□□ -0.62
FGFR2-222ENST00000604236 SLC25A29Q8N8R3 303 aa11.18□□□□□ -0.62
FGFR2-222ENST00000604236 KMT2BQ9UMN6 2715 aaPredicted RBP11.17□□□□□ -0.62
FGFR2-222ENST00000604236 TSPAN13O95857 204 aa11.17□□□□□ -0.62
FGFR2-222ENST00000604236 SPATA3Q8NHX4 192 aa11.17□□□□□ -0.62
FGFR2-222ENST00000604236 J3QR89 54 aa11.17□□□□□ -0.62
FGFR2-222ENST00000604236 A8MWV9 139 aa11.16□□□□□ -0.62
FGFR2-222ENST00000604236 ZMAT4Q9H898 229 aa11.16□□□□□ -0.62
FGFR2-222ENST00000604236 COX6A2Q02221 97 aa11.16□□□□□ -0.62
FGFR2-222ENST00000604236 PIK3CD-AS1Q5SR53 167 aa11.16□□□□□ -0.62
FGFR2-222ENST00000604236 EIF4EBP3O60516 100 aaPredicted RBP11.15□□□□□ -0.62
FGFR2-222ENST00000604236 TCL1BO95988 128 aa11.15□□□□□ -0.62
FGFR2-222ENST00000604236 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
FGFR2-222ENST00000604236 PRO1854Q9UHT4 67 aa11.15□□□□□ -0.62
FGFR2-222ENST00000604236 LINC01546A6NGU7 62 aa11.15□□□□□ -0.62
FGFR2-222ENST00000604236 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
FGFR2-222ENST00000604236 CFC1P0CG37 223 aa11.15□□□□□ -0.62
FGFR2-222ENST00000604236 ADAMTSL4-AS1Q5T5F5 129 aa11.15□□□□□ -0.62
FGFR2-222ENST00000604236 C1orf158Q8N1D5 194 aa11.15□□□□□ -0.62
FGFR2-222ENST00000604236 TRBV27A0A0K0K1C4 114 aa11.14□□□□□ -0.63
FGFR2-222ENST00000604236 NFE4Q86UQ8 179 aa11.14□□□□□ -0.63
FGFR2-222ENST00000604236 POM121L12Q8N7R1 296 aa11.14□□□□□ -0.63
FGFR2-222ENST00000604236 C4orf3Q8WVX3 66 aa11.14□□□□□ -0.63
FGFR2-222ENST00000604236 C10orf126Q8N4M7 172 aa11.13□□□□□ -0.63
FGFR2-222ENST00000604236 FAM110AQ9BQ89 295 aa11.13□□□□□ -0.63
FGFR2-222ENST00000604236 LGALS9O00182 355 aa11.13□□□□□ -0.63
FGFR2-222ENST00000604236 TRBV7-3A0A075B6L6 115 aa11.12□□□□□ -0.63
FGFR2-222ENST00000604236 TRAV12-1A0A0B4J245 112 aa11.12□□□□□ -0.63
FGFR2-222ENST00000604236 PAPPA-AS1Q5QFB9 102 aa11.12□□□□□ -0.63
FGFR2-222ENST00000604236 NDUFA11Q86Y39 141 aa11.12□□□□□ -0.63
FGFR2-222ENST00000604236 NTN5Q8WTR8 489 aaPredicted RBP11.12□□□□□ -0.63
FGFR2-222ENST00000604236 F5H768 121 aa11.12□□□□□ -0.63
FGFR2-222ENST00000604236 TMEM101Q96IK0 257 aa11.12□□□□□ -0.63
FGFR2-222ENST00000604236 A0A096LNT2 108 aa11.12□□□□□ -0.63
FGFR2-222ENST00000604236 Q8N3U1 123 aa11.12□□□□□ -0.63
FGFR2-222ENST00000604236 FAM19A4Q96LR4 140 aa11.12□□□□□ -0.63
FGFR2-222ENST00000604236 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
FGFR2-222ENST00000604236 SAMD13Q5VXD3 122 aa11.11□□□□□ -0.63
FGFR2-222ENST00000604236 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
FGFR2-222ENST00000604236 RPL13AP40429 203 aaKnown RBP11.11□□□□□ -0.63
FGFR2-222ENST00000604236 TM2D2Q9BX73 214 aa11.11□□□□□ -0.63
FGFR2-222ENST00000604236 PRSS47A8MTI9 375 aa11.1□□□□□ -0.63
FGFR2-222ENST00000604236 GYPEP15421 78 aa11.1□□□□□ -0.63
FGFR2-222ENST00000604236 HIGD1BQ9P298 99 aa11.1□□□□□ -0.63
FGFR2-222ENST00000604236 PAX4O43316 350 aa11.1□□□□□ -0.63
FGFR2-222ENST00000604236 MED14OSP0DP75 135 aa11.1□□□□□ -0.63
FGFR2-222ENST00000604236 TMEM238C9JI98 176 aa11.09□□□□□ -0.63
FGFR2-222ENST00000604236 BRI3O95415 125 aa11.09□□□□□ -0.63
FGFR2-222ENST00000604236 LY6G6DO95868 133 aa11.09□□□□□ -0.63
FGFR2-222ENST00000604236 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
FGFR2-222ENST00000604236 MRAPQ8TCY5 172 aa11.09□□□□□ -0.63
FGFR2-222ENST00000604236 TIMM17AQ99595 171 aa11.09□□□□□ -0.63
FGFR2-222ENST00000604236 GAGE12HA6NDE8 117 aa11.08□□□□□ -0.64
FGFR2-222ENST00000604236 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.08□□□□□ -0.64
FGFR2-222ENST00000604236 C3orf56Q8N813 242 aa11.08□□□□□ -0.64
FGFR2-222ENST00000604236 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
FGFR2-222ENST00000604236 UFSP1Q6NVU6 142 aa11.08□□□□□ -0.64
FGFR2-222ENST00000604236 TRBV7-9A0A0J9YWB2 115 aa11.08□□□□□ -0.64
FGFR2-222ENST00000604236 C6orf226Q5I0X4 101 aa11.07□□□□□ -0.64
FGFR2-222ENST00000604236 Q9HAA7 133 aa11.07□□□□□ -0.64
FGFR2-222ENST00000604236 TENM3Q9P273 2699 aa11.07□□□□□ -0.64
FGFR2-222ENST00000604236 TMEM223A0PJW6 202 aa11.06□□□□□ -0.64
FGFR2-222ENST00000604236 SIGMAR1Q99720 223 aa11.06□□□□□ -0.64
FGFR2-222ENST00000604236 TEX49A0A1B0GTD5 131 aa11.06□□□□□ -0.64
FGFR2-222ENST00000604236 SLC25A20O43772 301 aa11.06□□□□□ -0.64
FGFR2-222ENST00000604236 IGHV3-30P01768 117 aa11.06□□□□□ -0.64
FGFR2-222ENST00000604236 IGHV3-30-5P0DP03 117 aa11.06□□□□□ -0.64
FGFR2-222ENST00000604236 C2orf82Q6UX34 121 aa11.06□□□□□ -0.64
FGFR2-222ENST00000604236 TMEM243Q9BU79 118 aa11.06□□□□□ -0.64
FGFR2-222ENST00000604236 K7EQD1 137 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 ANKRD29Q8N6D5 301 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 ATP5G1P05496 136 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 IGLV4-60A0A075B6I1 120 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 G3V4G9 280 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 LEPROTO15243 131 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 ANGP03950 147 aaKnown RBP11.05□□□□□ -0.64
FGFR2-222ENST00000604236 COX6CP09669 75 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 RHOHQ15669 191 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 OXLD1Q5BKU9 147 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 DNAJC30Q96LL9 226 aa11.05□□□□□ -0.64
FGFR2-222ENST00000604236 PRR3P79522 188 aaKnown RBP11.04□□□□□ -0.64
FGFR2-222ENST00000604236 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
FGFR2-222ENST00000604236 TRBV20-1A0A075B6N2 111 aa11.04□□□□□ -0.64
FGFR2-222ENST00000604236 CHCHD7Q9BUK0 85 aa11.04□□□□□ -0.64
FGFR2-222ENST00000604236 SPANXB1Q9NS25 103 aaPredicted RBP11.03□□□□□ -0.64
FGFR2-222ENST00000604236 VSIG2Q96IQ7 327 aa11.03□□□□□ -0.64
FGFR2-222ENST00000604236 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.64
FGFR2-222ENST00000604236 NTM-AS1Q6ZSK4 140 aa11.02□□□□□ -0.65
FGFR2-222ENST00000604236 TENM2Q9NT68 2774 aa11.02□□□□□ -0.65
FGFR2-222ENST00000604236 TRIAP1O43715 76 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms