RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 MGAM2Q2M2H8 2515 aa10.66□□□□□ -0.7
HIF3A-218ENST00000600383 PAX4O43316 350 aa10.65□□□□□ -0.7
HIF3A-218ENST00000600383 MRPS16Q9Y3D3 137 aaKnown RBP10.65□□□□□ -0.7
HIF3A-218ENST00000600383 A0A0J9YXV3 536 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 F5H768 121 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 UBE2L6O14933 153 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 ATP5G1P05496 136 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 FGF6P10767 208 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 Q6ZUT4 128 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 BOD1L2Q8IYS8 172 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 GTSF1LQ9H1H1 148 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 TRBV25-1A0A075B6N4 114 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 HINT1P49773 126 aaPredicted RBP10.64□□□□□ -0.71
HIF3A-218ENST00000600383 DEFB121Q5J5C9 76 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 AMELXQ99217 191 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 CHAC1Q9BUX1 264 aa10.64□□□□□ -0.71
HIF3A-218ENST00000600383 ATP6V0E2Q8NHE4 81 aa10.63□□□□□ -0.71
HIF3A-218ENST00000600383 TMEM243Q9BU79 118 aa10.63□□□□□ -0.71
HIF3A-218ENST00000600383 AMMECR1LQ6DCA0 310 aa10.63□□□□□ -0.71
HIF3A-218ENST00000600383 TRAV26-1A0A087WT03 109 aa10.62□□□□□ -0.71
HIF3A-218ENST00000600383 ORAOV1Q8WV07 137 aa10.62□□□□□ -0.71
HIF3A-218ENST00000600383 TRBV6-8A0A0A6YYG3 113 aa10.61□□□□□ -0.71
HIF3A-218ENST00000600383 SBSPONQ8IVN8 264 aa10.61□□□□□ -0.71
HIF3A-218ENST00000600383 VSIG2Q96IQ7 327 aa10.61□□□□□ -0.71
HIF3A-218ENST00000600383 GAGE6Q13070 117 aa10.61□□□□□ -0.71
HIF3A-218ENST00000600383 MPV17L2Q567V2 206 aa10.61□□□□□ -0.71
HIF3A-218ENST00000600383 C2orf91Q6ZV80 131 aa10.61□□□□□ -0.71
HIF3A-218ENST00000600383 MAPKAPK5-AS1Q8N8E1 139 aa10.61□□□□□ -0.71
HIF3A-218ENST00000600383 MRAPQ8TCY5 172 aa10.61□□□□□ -0.71
HIF3A-218ENST00000600383 CHCHD5Q9BSY4 110 aa10.61□□□□□ -0.71
HIF3A-218ENST00000600383 TMEM97Q5BJF2 176 aa10.6□□□□□ -0.71
HIF3A-218ENST00000600383 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
HIF3A-218ENST00000600383 TIMM21Q9BVV7 248 aa10.6□□□□□ -0.71
HIF3A-218ENST00000600383 OR5A1Q8NGJ0 315 aa10.6□□□□□ -0.71
HIF3A-218ENST00000600383 IGHV3-64A0A075B6Q5 118 aa10.59□□□□□ -0.71
HIF3A-218ENST00000600383 E9PLD3 99 aa10.59□□□□□ -0.71
HIF3A-218ENST00000600383 HERVK_113P61574 105 aa10.59□□□□□ -0.71
HIF3A-218ENST00000600383 C12orf74Q32Q52 190 aa10.59□□□□□ -0.71
HIF3A-218ENST00000600383 TMEM101Q96IK0 257 aa10.59□□□□□ -0.71
HIF3A-218ENST00000600383 MRPS36P82909 103 aaKnown RBP10.58□□□□□ -0.72
HIF3A-218ENST00000600383 TENM3Q9P273 2699 aa10.58□□□□□ -0.72
HIF3A-218ENST00000600383 K7EIL1 84 aa10.58□□□□□ -0.72
HIF3A-218ENST00000600383 ZNF22P17026 224 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-218ENST00000600383 TRAV13-1A0A0B4J241 112 aa10.57□□□□□ -0.72
HIF3A-218ENST00000600383 A0A0J9YWU9 116 aa10.57□□□□□ -0.72
HIF3A-218ENST00000600383 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
HIF3A-218ENST00000600383 CDC42SE2Q9NRR3 84 aa10.57□□□□□ -0.72
HIF3A-218ENST00000600383 CSDC2Q9Y534 153 aaKnown RBP10.57□□□□□ -0.72
HIF3A-218ENST00000600383 TEX48A0A1B0GUV7 120 aa10.57□□□□□ -0.72
HIF3A-218ENST00000600383 TMEM262E9PQX1 116 aa10.57□□□□□ -0.72
HIF3A-218ENST00000600383 GEMIN7Q9H840 131 aaKnown RBP10.57□□□□□ -0.72
HIF3A-218ENST00000600383 UBE2D1P51668 147 aa10.56□□□□□ -0.72
HIF3A-218ENST00000600383 IGKV3OR2-268A0A0C4DH90 116 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 TMEM223A0PJW6 202 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 H7C423 109 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 SIVA1O15304 175 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 CCL25O15444 150 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 COX11Q9Y6N1 276 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 MYMXA0A1B0GTQ4 84 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 TINCRA0A1B0GVN0 87 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 UBE2V1Q13404 147 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 DNAH3Q8TD57 4116 aa10.55□□□□□ -0.72
HIF3A-218ENST00000600383 IGLV4-60A0A075B6I1 120 aa10.54□□□□□ -0.72
HIF3A-218ENST00000600383 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
HIF3A-218ENST00000600383 PCP4P48539 62 aa10.54□□□□□ -0.72
HIF3A-218ENST00000600383 PTTG1IPP53801 180 aa10.54□□□□□ -0.72
HIF3A-218ENST00000600383 Q6ZTC4 211 aa10.54□□□□□ -0.72
HIF3A-218ENST00000600383 MRPL23Q16540 153 aaKnown RBP10.54□□□□□ -0.72
HIF3A-218ENST00000600383 K7EP13 123 aa10.53□□□□□ -0.72
HIF3A-218ENST00000600383 COX6A2Q02221 97 aa10.53□□□□□ -0.72
HIF3A-218ENST00000600383 BVES-AS1Q5T3Y7 98 aa10.53□□□□□ -0.72
HIF3A-218ENST00000600383 C11orf68Q9H3H3 251 aaKnown RBP10.53□□□□□ -0.72
HIF3A-218ENST00000600383 TRAV8-3A0A0A6YYJ7 113 aa10.52□□□□□ -0.72
HIF3A-218ENST00000600383 J3QQQ9 107 aa10.52□□□□□ -0.72
HIF3A-218ENST00000600383 TSPEAR-AS2P59090 65 aa10.52□□□□□ -0.72
HIF3A-218ENST00000600383 NANOS2P60321 138 aaKnown RBP10.52□□□□□ -0.72
HIF3A-218ENST00000600383 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.72
HIF3A-218ENST00000600383 CDKN2A-AS1Q9UH64 79 aa10.52□□□□□ -0.72
HIF3A-218ENST00000600383 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
HIF3A-218ENST00000600383 LGALS3P17931 250 aaKnown RBP10.52□□□□□ -0.73
HIF3A-218ENST00000600383 SCGB1D4Q6XE38 83 aa10.52□□□□□ -0.73
HIF3A-218ENST00000600383 C11orf45Q8TAV5 145 aa10.52□□□□□ -0.73
HIF3A-218ENST00000600383 SPATA25Q9BR10 227 aa10.52□□□□□ -0.73
HIF3A-218ENST00000600383 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.73
HIF3A-218ENST00000600383 RBX1P62877 108 aa10.51□□□□□ -0.73
HIF3A-218ENST00000600383 LEPROTO15243 131 aa10.51□□□□□ -0.73
HIF3A-218ENST00000600383 KPRPQ5T749 579 aaPredicted RBP10.51□□□□□ -0.73
HIF3A-218ENST00000600383 HIGD1BQ9P298 99 aa10.51□□□□□ -0.73
HIF3A-218ENST00000600383 TIRAPP58753 221 aa10.5□□□□□ -0.73
HIF3A-218ENST00000600383 IGHV3-30-3P0DP02 117 aa10.49□□□□□ -0.73
HIF3A-218ENST00000600383 HERVK_113P63121 156 aa10.49□□□□□ -0.73
HIF3A-218ENST00000600383 HSD52Q0P140 79 aa10.49□□□□□ -0.73
HIF3A-218ENST00000600383 PLEKHB2Q96CS7 222 aa10.49□□□□□ -0.73
HIF3A-218ENST00000600383 SEC11AP67812 179 aa10.49□□□□□ -0.73
HIF3A-218ENST00000600383 TM2D3Q9BRN9 247 aa10.49□□□□□ -0.73
HIF3A-218ENST00000600383 H3BRM9 83 aa10.48□□□□□ -0.73
HIF3A-218ENST00000600383 GCSHP23434 173 aa10.48□□□□□ -0.73
HIF3A-218ENST00000600383 C21orf62-AS1Q17RA5 79 aa10.48□□□□□ -0.73
HIF3A-218ENST00000600383 IGHV1-58A0A0C4DH39 117 aa10.48□□□□□ -0.73
HIF3A-218ENST00000600383 Q6ZVH6 145 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 315 ms