RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 UBE2D4Q9Y2X8 147 aa12.63□□□□□ -0.39
CCDC9-205ENST00000600117 ORMDL2Q53FV1 153 aa12.62□□□□□ -0.39
CCDC9-205ENST00000600117 ENHOQ6UWT2 76 aa12.62□□□□□ -0.39
CCDC9-205ENST00000600117 Q6ZRN7 208 aaPredicted RBP12.62□□□□□ -0.39
CCDC9-205ENST00000600117 TIMM21Q9BVV7 248 aa12.62□□□□□ -0.39
CCDC9-205ENST00000600117 PRR34Q9NV39 138 aa12.62□□□□□ -0.39
CCDC9-205ENST00000600117 CDK2AP2O75956 126 aa12.61□□□□□ -0.39
CCDC9-205ENST00000600117 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
CCDC9-205ENST00000600117 MAPKAPK5-AS1Q8N8E1 139 aa12.61□□□□□ -0.39
CCDC9-205ENST00000600117 UBE2WQ96B02 151 aa12.61□□□□□ -0.39
CCDC9-205ENST00000600117 TMEM18Q96B42 140 aa12.61□□□□□ -0.39
CCDC9-205ENST00000600117 Q9HAA7 133 aa12.61□□□□□ -0.39
CCDC9-205ENST00000600117 FA2HQ7L5A8 372 aa12.6□□□□□ -0.39
CCDC9-205ENST00000600117 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
CCDC9-205ENST00000600117 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
CCDC9-205ENST00000600117 CLPSL2Q6UWE3 100 aa12.59□□□□□ -0.39
CCDC9-205ENST00000600117 C2orf66Q6UXQ4 117 aa12.59□□□□□ -0.39
CCDC9-205ENST00000600117 OR5A1Q8NGJ0 315 aa12.59□□□□□ -0.39
CCDC9-205ENST00000600117 FAM104AQ969W3 186 aa12.59□□□□□ -0.39
CCDC9-205ENST00000600117 TMEM101Q96IK0 257 aa12.59□□□□□ -0.39
CCDC9-205ENST00000600117 REG3AQ06141 175 aa12.58□□□□□ -0.4
CCDC9-205ENST00000600117 NFE4Q86UQ8 179 aa12.58□□□□□ -0.4
CCDC9-205ENST00000600117 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
CCDC9-205ENST00000600117 SPANXA1Q9NS26 97 aa12.58□□□□□ -0.4
CCDC9-205ENST00000600117 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
CCDC9-205ENST00000600117 CRPP02741 224 aa12.57□□□□□ -0.4
CCDC9-205ENST00000600117 LINC00614P0C842 121 aa12.57□□□□□ -0.4
CCDC9-205ENST00000600117 SMAGPQ0VAQ4 97 aa12.57□□□□□ -0.4
CCDC9-205ENST00000600117 Q0VG73 95 aa12.57□□□□□ -0.4
CCDC9-205ENST00000600117 AP5S1Q9NUS5 200 aa12.57□□□□□ -0.4
CCDC9-205ENST00000600117 DGAT2L7PQ6IED9 249 aa12.56□□□□□ -0.4
CCDC9-205ENST00000600117 Q6ZUT4 128 aa12.56□□□□□ -0.4
CCDC9-205ENST00000600117 ZNF664Q8N3J9 261 aa12.56□□□□□ -0.4
CCDC9-205ENST00000600117 PYGO1Q9Y3Y4 419 aa12.56□□□□□ -0.4
CCDC9-205ENST00000600117 RAB5BP61020 215 aa12.55□□□□□ -0.4
CCDC9-205ENST00000600117 MRPS36P82909 103 aaKnown RBP12.55□□□□□ -0.4
CCDC9-205ENST00000600117 MIAQ16674 131 aa12.55□□□□□ -0.4
CCDC9-205ENST00000600117 TOMM6Q96B49 74 aa12.55□□□□□ -0.4
CCDC9-205ENST00000600117 OPRPNQ99935 248 aaPredicted RBP12.55□□□□□ -0.4
CCDC9-205ENST00000600117 A0A096LNJ9 63 aa12.54□□□□□ -0.4
CCDC9-205ENST00000600117 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
CCDC9-205ENST00000600117 G0S2P27469 103 aa12.54□□□□□ -0.4
CCDC9-205ENST00000600117 Q8N1X5 172 aa12.54□□□□□ -0.4
CCDC9-205ENST00000600117 IGIPA6NJ69 53 aa12.53□□□□□ -0.4
CCDC9-205ENST00000600117 LINC00310P59036 64 aa12.53□□□□□ -0.4
CCDC9-205ENST00000600117 RNASE13Q5GAN3 156 aaKnown RBP12.53□□□□□ -0.4
CCDC9-205ENST00000600117 KRTAP26-1Q6PEX3 210 aa12.53□□□□□ -0.4
CCDC9-205ENST00000600117 RMI2Q96E14 147 aa12.53□□□□□ -0.4
CCDC9-205ENST00000600117 IGLV4-3A0A075B6K6 122 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 IGKV2D-24A0A075B6R9 120 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST1H2BKO60814 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST1H2BJP06899 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST1H2BOP23527 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST1H2BBP33778 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST1H2BDP58876 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST1H2BCP62807 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST2H2BEQ16778 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.52□□□□□ -0.41
CCDC9-205ENST00000600117 BAGE3Q86Y29 109 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST1H2BHQ93079 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 CHCHD1Q96BP2 118 aaKnown RBP12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST1H2BNQ99877 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 HIST1H2BMQ99879 126 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 TM2D2Q9BX73 214 aa12.52□□□□□ -0.41
CCDC9-205ENST00000600117 TRAV8-4A0A0B4J246 113 aa12.51□□□□□ -0.41
CCDC9-205ENST00000600117 IGKV3OR2-268A0A0C4DH90 116 aa12.51□□□□□ -0.41
CCDC9-205ENST00000600117 TNP2Q05952 138 aa12.51□□□□□ -0.41
CCDC9-205ENST00000600117 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
CCDC9-205ENST00000600117 C1orf43Q9BWL3 253 aa12.51□□□□□ -0.41
CCDC9-205ENST00000600117 IGLV10-54A0A075B6I4 117 aa12.5□□□□□ -0.41
CCDC9-205ENST00000600117 NPSP0C0P6 89 aa12.5□□□□□ -0.41
CCDC9-205ENST00000600117 TIMM17AQ99595 171 aa12.5□□□□□ -0.41
CCDC9-205ENST00000600117 SRRM2Q9UQ35 2752 aaKnown RBP12.5□□□□□ -0.41
CCDC9-205ENST00000600117 LINC00959A0A1B0GUT2 108 aa12.49□□□□□ -0.41
CCDC9-205ENST00000600117 LINC01549A6NIU2 74 aa12.49□□□□□ -0.41
CCDC9-205ENST00000600117 SERF1AO75920 110 aa12.49□□□□□ -0.41
CCDC9-205ENST00000600117 ERASQ7Z444 233 aa12.49□□□□□ -0.41
CCDC9-205ENST00000600117 TMEM141Q96I45 108 aa12.49□□□□□ -0.41
CCDC9-205ENST00000600117 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
CCDC9-205ENST00000600117 HBDP02042 147 aa12.48□□□□□ -0.41
CCDC9-205ENST00000600117 PDZD11Q5EBL8 140 aa12.48□□□□□ -0.41
CCDC9-205ENST00000600117 LINC00173Q6ZV60 143 aa12.48□□□□□ -0.41
CCDC9-205ENST00000600117 SCGB3A1Q96QR1 104 aa12.48□□□□□ -0.41
CCDC9-205ENST00000600117 PSCAO43653 123 aa12.47□□□□□ -0.41
CCDC9-205ENST00000600117 NUPR1O60356 82 aa12.47□□□□□ -0.41
CCDC9-205ENST00000600117 ZC2HC1BQ5TFG8 222 aa12.47□□□□□ -0.41
CCDC9-205ENST00000600117 AMELXQ99217 191 aa12.47□□□□□ -0.41
CCDC9-205ENST00000600117 LRCOL1A6NCL2 159 aa12.46□□□□□ -0.41
CCDC9-205ENST00000600117 C1orf196B1AJZ1 125 aa12.46□□□□□ -0.41
CCDC9-205ENST00000600117 CHCHD10Q8WYQ3 142 aaPredicted RBP12.46□□□□□ -0.41
CCDC9-205ENST00000600117 TRAV13-1A0A0B4J241 112 aa12.45□□□□□ -0.42
CCDC9-205ENST00000600117 HSBP1O75506 76 aa12.45□□□□□ -0.42
CCDC9-205ENST00000600117 VPS13BQ7Z7G8 4022 aa12.45□□□□□ -0.42
CCDC9-205ENST00000600117 MYCBP2O75592 4640 aa12.44□□□□□ -0.42
CCDC9-205ENST00000600117 A0A087WTM6 91 aa12.44□□□□□ -0.42
CCDC9-205ENST00000600117 GAGE12HA6NDE8 117 aa12.44□□□□□ -0.42
CCDC9-205ENST00000600117 IFITM10A6NMD0 228 aa12.44□□□□□ -0.42
CCDC9-205ENST00000600117 CCL25O15444 150 aa12.44□□□□□ -0.42
CCDC9-205ENST00000600117 WFDC2Q14508 124 aa12.44□□□□□ -0.42
CCDC9-205ENST00000600117 SS18Q15532 418 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms