RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 Q8N3U1 123 aa11.45□□□□□ -0.58
LTBP4-209ENST00000594116 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
LTBP4-209ENST00000594116 CHCHD1Q96BP2 118 aaKnown RBP11.45□□□□□ -0.58
LTBP4-209ENST00000594116 APOBP04114 4563 aaKnown RBP11.45□□□□□ -0.58
LTBP4-209ENST00000594116 A0A087WX48 190 aa11.44□□□□□ -0.58
LTBP4-209ENST00000594116 K7EP13 123 aa11.44□□□□□ -0.58
LTBP4-209ENST00000594116 FGF6P10767 208 aa11.44□□□□□ -0.58
LTBP4-209ENST00000594116 ZNF25P17030 456 aaPredicted RBP11.44□□□□□ -0.58
LTBP4-209ENST00000594116 LINC00310P59036 64 aa11.44□□□□□ -0.58
LTBP4-209ENST00000594116 RBX1P62877 108 aa11.44□□□□□ -0.58
LTBP4-209ENST00000594116 RNASEKQ6P5S7 137 aaKnown RBP11.44□□□□□ -0.58
LTBP4-209ENST00000594116 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
LTBP4-209ENST00000594116 TIMM21Q9BVV7 248 aa11.44□□□□□ -0.58
LTBP4-209ENST00000594116 TMEM262E9PQX1 116 aa11.43□□□□□ -0.58
LTBP4-209ENST00000594116 IGHV3-30P01768 117 aa11.43□□□□□ -0.58
LTBP4-209ENST00000594116 IGHV3-33P01772 117 aa11.43□□□□□ -0.58
LTBP4-209ENST00000594116 IGHV3-30-3P0DP02 117 aa11.43□□□□□ -0.58
LTBP4-209ENST00000594116 IGHV3-30-5P0DP03 117 aa11.43□□□□□ -0.58
LTBP4-209ENST00000594116 G0S2P27469 103 aa11.43□□□□□ -0.58
LTBP4-209ENST00000594116 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
LTBP4-209ENST00000594116 C2orf66Q6UXQ4 117 aa11.43□□□□□ -0.58
LTBP4-209ENST00000594116 UBE2D4Q9Y2X8 147 aa11.43□□□□□ -0.58
LTBP4-209ENST00000594116 DNAH5Q8TE73 4624 aa11.42□□□□□ -0.58
LTBP4-209ENST00000594116 A0A096LNJ9 63 aa11.42□□□□□ -0.58
LTBP4-209ENST00000594116 SMAGPQ0VAQ4 97 aa11.42□□□□□ -0.58
LTBP4-209ENST00000594116 Q8N1X5 172 aa11.42□□□□□ -0.58
LTBP4-209ENST00000594116 Q8N976 141 aa11.42□□□□□ -0.58
LTBP4-209ENST00000594116 CYSLTR1Q9Y271 337 aa11.42□□□□□ -0.58
LTBP4-209ENST00000594116 CSDC2Q9Y534 153 aaKnown RBP11.42□□□□□ -0.58
LTBP4-209ENST00000594116 IGLV4-60A0A075B6I1 120 aa11.41□□□□□ -0.58
LTBP4-209ENST00000594116 SERF1AO75920 110 aa11.41□□□□□ -0.58
LTBP4-209ENST00000594116 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
LTBP4-209ENST00000594116 C10orf126Q8N4M7 172 aa11.41□□□□□ -0.58
LTBP4-209ENST00000594116 TOMM6Q96B49 74 aa11.41□□□□□ -0.58
LTBP4-209ENST00000594116 SPANXA1Q9NS26 97 aa11.41□□□□□ -0.58
LTBP4-209ENST00000594116 LINC01549A6NIU2 74 aa11.4□□□□□ -0.58
LTBP4-209ENST00000594116 COA6Q5JTJ3 125 aaKnown RBP11.4□□□□□ -0.58
LTBP4-209ENST00000594116 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
LTBP4-209ENST00000594116 TRAV9-2A0A087WT02 112 aa11.39□□□□□ -0.59
LTBP4-209ENST00000594116 HBDP02042 147 aa11.39□□□□□ -0.59
LTBP4-209ENST00000594116 TMEM101Q96IK0 257 aa11.39□□□□□ -0.59
LTBP4-209ENST00000594116 IGIPA6NJ69 53 aa11.38□□□□□ -0.59
LTBP4-209ENST00000594116 IBA57-AS1B1ANH7 110 aa11.38□□□□□ -0.59
LTBP4-209ENST00000594116 NUPR1O60356 82 aa11.38□□□□□ -0.59
LTBP4-209ENST00000594116 HSBP1O75506 76 aa11.38□□□□□ -0.59
LTBP4-209ENST00000594116 ANGP03950 147 aaKnown RBP11.38□□□□□ -0.59
LTBP4-209ENST00000594116 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
LTBP4-209ENST00000594116 FAM104AQ969W3 186 aa11.38□□□□□ -0.59
LTBP4-209ENST00000594116 CDC42SE2Q9NRR3 84 aa11.38□□□□□ -0.59
LTBP4-209ENST00000594116 PRR34Q9NV39 138 aa11.38□□□□□ -0.59
LTBP4-209ENST00000594116 KLK12Q9UKR0 248 aa11.38□□□□□ -0.59
LTBP4-209ENST00000594116 NPSP0C0P6 89 aa11.37□□□□□ -0.59
LTBP4-209ENST00000594116 MRPS36P82909 103 aaKnown RBP11.37□□□□□ -0.59
LTBP4-209ENST00000594116 PMCHL1Q16048 86 aa11.37□□□□□ -0.59
LTBP4-209ENST00000594116 NFE4Q86UQ8 179 aa11.37□□□□□ -0.59
LTBP4-209ENST00000594116 TIMM17AQ99595 171 aa11.37□□□□□ -0.59
LTBP4-209ENST00000594116 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
LTBP4-209ENST00000594116 EREGO14944 169 aa11.36□□□□□ -0.59
LTBP4-209ENST00000594116 PDZD11Q5EBL8 140 aa11.36□□□□□ -0.59
LTBP4-209ENST00000594116 DGAT2L7PQ6IED9 249 aa11.36□□□□□ -0.59
LTBP4-209ENST00000594116 CDPF1Q6NVV7 123 aa11.36□□□□□ -0.59
LTBP4-209ENST00000594116 Q6ZUT4 128 aa11.36□□□□□ -0.59
LTBP4-209ENST00000594116 IGLV4-3A0A075B6K6 122 aa11.35□□□□□ -0.59
LTBP4-209ENST00000594116 NDUFA6P56556 154 aa11.35□□□□□ -0.59
LTBP4-209ENST00000594116 ENHOQ6UWT2 76 aa11.35□□□□□ -0.59
LTBP4-209ENST00000594116 ERASQ7Z444 233 aa11.35□□□□□ -0.59
LTBP4-209ENST00000594116 LINC00269Q8N2A0 174 aa11.35□□□□□ -0.59
LTBP4-209ENST00000594116 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
LTBP4-209ENST00000594116 FAM19A2Q8N3H0 131 aa11.34□□□□□ -0.59
LTBP4-209ENST00000594116 TMEM141Q96I45 108 aa11.34□□□□□ -0.59
LTBP4-209ENST00000594116 SCGB3A1Q96QR1 104 aa11.34□□□□□ -0.59
LTBP4-209ENST00000594116 REG3AQ06141 175 aa11.33□□□□□ -0.6
LTBP4-209ENST00000594116 OPRPNQ99935 248 aaPredicted RBP11.33□□□□□ -0.6
LTBP4-209ENST00000594116 TRAV8-3A0A0A6YYJ7 113 aa11.32□□□□□ -0.6
LTBP4-209ENST00000594116 CRPP02741 224 aa11.32□□□□□ -0.6
LTBP4-209ENST00000594116 CLPSL2Q6UWE3 100 aa11.32□□□□□ -0.6
LTBP4-209ENST00000594116 UBE2WQ96B02 151 aa11.32□□□□□ -0.6
LTBP4-209ENST00000594116 AMELXQ99217 191 aa11.32□□□□□ -0.6
LTBP4-209ENST00000594116 A0A087WTM6 91 aa11.31□□□□□ -0.6
LTBP4-209ENST00000594116 MIAQ16674 131 aa11.31□□□□□ -0.6
LTBP4-209ENST00000594116 RNASE13Q5GAN3 156 aaKnown RBP11.31□□□□□ -0.6
LTBP4-209ENST00000594116 ATP5LO75964 103 aa11.3□□□□□ -0.6
LTBP4-209ENST00000594116 PAPPA-AS1Q5QFB9 102 aa11.3□□□□□ -0.6
LTBP4-209ENST00000594116 Q6ZN92 141 aa11.3□□□□□ -0.6
LTBP4-209ENST00000594116 LINC00173Q6ZV60 143 aa11.3□□□□□ -0.6
LTBP4-209ENST00000594116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.29□□□□□ -0.6
LTBP4-209ENST00000594116 TEX43Q6ZNM6 134 aa11.29□□□□□ -0.6
LTBP4-209ENST00000594116 Q9HAA7 133 aa11.29□□□□□ -0.6
LTBP4-209ENST00000594116 TRAV8-4A0A0B4J246 113 aa11.28□□□□□ -0.6
LTBP4-209ENST00000594116 LINC00959A0A1B0GUT2 108 aa11.28□□□□□ -0.6
LTBP4-209ENST00000594116 LEPROTL1O95214 131 aa11.28□□□□□ -0.6
LTBP4-209ENST00000594116 FUSP35637 526 aaKnown RBP eCLIP11.28□□□□□ -0.6
LTBP4-209ENST00000594116 BAALCQ8WXS3 180 aa11.28□□□□□ -0.6
LTBP4-209ENST00000594116 PACRGQ96M98 296 aaPredicted RBP11.28□□□□□ -0.6
LTBP4-209ENST00000594116 VCX2Q9H322 139 aa11.28□□□□□ -0.6
LTBP4-209ENST00000594116 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.61
LTBP4-209ENST00000594116 S100A6P06703 90 aa11.27□□□□□ -0.61
LTBP4-209ENST00000594116 IFI27L1Q96BM0 104 aa11.27□□□□□ -0.61
LTBP4-209ENST00000594116 RMI2Q96E14 147 aa11.27□□□□□ -0.61
LTBP4-209ENST00000594116 IFITM10A6NMD0 228 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms