RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 GEMIN7Q9H840 131 aaKnown RBP7.36□□□□□ -1.23
VPS25-206ENST00000591584 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
VPS25-206ENST00000591584 PRO0255Q9UI72 69 aa7.36□□□□□ -1.23
VPS25-206ENST00000591584 C2CD3Q4AC94 2353 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 IGLV5-45A0A087WSX0 123 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 C9orf118A6NHY6 69 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 EMP1P54849 157 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 KRTAP24-1Q3LI83 254 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 NTM-AS1Q6ZSK4 140 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 OR5A1Q8NGJ0 315 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 RNF183Q96D59 192 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 NACAE9PAV3 2078 aa7.35□□□□□ -1.23
VPS25-206ENST00000591584 TRBV6-8A0A0A6YYG3 113 aa7.34□□□□□ -1.23
VPS25-206ENST00000591584 DEFB130BP0DP73 79 aa7.34□□□□□ -1.23
VPS25-206ENST00000591584 DEFB130AP0DP74 79 aa7.34□□□□□ -1.23
VPS25-206ENST00000591584 EGFEM1PQ0D2K5 195 aa7.34□□□□□ -1.23
VPS25-206ENST00000591584 SRSF9Q13242 221 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS25-206ENST00000591584 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
VPS25-206ENST00000591584 SPATA3Q8NHX4 192 aa7.34□□□□□ -1.23
VPS25-206ENST00000591584 CDC42SE2Q9NRR3 84 aa7.34□□□□□ -1.23
VPS25-206ENST00000591584 A0A0J9YY99 117 aa7.33□□□□□ -1.24
VPS25-206ENST00000591584 SPART-AS1P0CW21 52 aa7.33□□□□□ -1.24
VPS25-206ENST00000591584 IGHV4-30-4P0DP06 118 aa7.33□□□□□ -1.24
VPS25-206ENST00000591584 VAMP3Q15836 100 aa7.33□□□□□ -1.24
VPS25-206ENST00000591584 FAM222AQ5U5X8 452 aa7.33□□□□□ -1.24
VPS25-206ENST00000591584 CEMP1Q6PRD7 247 aaPredicted RBP7.33□□□□□ -1.24
VPS25-206ENST00000591584 Q6ZUT4 128 aa7.33□□□□□ -1.24
VPS25-206ENST00000591584 Q6ZVH6 145 aa7.33□□□□□ -1.24
VPS25-206ENST00000591584 SH2D6Q7Z4S9 175 aa7.33□□□□□ -1.24
VPS25-206ENST00000591584 ATP6V0E2Q8NHE4 81 aa7.33□□□□□ -1.24
VPS25-206ENST00000591584 OTOGQ6ZRI0 2925 aa7.32□□□□□ -1.24
VPS25-206ENST00000591584 A0A1B0GWB2 263 aa7.32□□□□□ -1.24
VPS25-206ENST00000591584 FXYD2P54710 66 aa7.32□□□□□ -1.24
VPS25-206ENST00000591584 DAD1P61803 113 aa7.32□□□□□ -1.24
VPS25-206ENST00000591584 DEFB135Q30KP9 77 aa7.32□□□□□ -1.24
VPS25-206ENST00000591584 GTF2H5Q6ZYL4 71 aa7.32□□□□□ -1.24
VPS25-206ENST00000591584 VSIG2Q96IQ7 327 aa7.32□□□□□ -1.24
VPS25-206ENST00000591584 CUBNO60494 3623 aa7.32□□□□□ -1.24
VPS25-206ENST00000591584 TRAV26-1A0A087WT03 109 aa7.31□□□□□ -1.24
VPS25-206ENST00000591584 IGHV4-28A0A0C4DH34 117 aa7.31□□□□□ -1.24
VPS25-206ENST00000591584 TMEM238C9JI98 176 aa7.31□□□□□ -1.24
VPS25-206ENST00000591584 CCL25O15444 150 aa7.31□□□□□ -1.24
VPS25-206ENST00000591584 ATP5G1P05496 136 aa7.31□□□□□ -1.24
VPS25-206ENST00000591584 IGHV3-30-3P0DP02 117 aa7.31□□□□□ -1.24
VPS25-206ENST00000591584 Q8NAQ8 132 aa7.31□□□□□ -1.24
VPS25-206ENST00000591584 SETXQ7Z333 2677 aaKnown RBP7.3□□□□□ -1.24
VPS25-206ENST00000591584 A0A1B0GUV1 79 aa7.3□□□□□ -1.24
VPS25-206ENST00000591584 PAX4O43316 350 aa7.3□□□□□ -1.24
VPS25-206ENST00000591584 GYPEP15421 78 aa7.3□□□□□ -1.24
VPS25-206ENST00000591584 C12orf74Q32Q52 190 aa7.3□□□□□ -1.24
VPS25-206ENST00000591584 LINC00242Q5T6M2 205 aa7.3□□□□□ -1.24
VPS25-206ENST00000591584 NSD1Q96L73 2696 aaPredicted RBP7.3□□□□□ -1.24
VPS25-206ENST00000591584 LOC100131303A0A0U1RQF7 123 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 GAGE10A6NGK3 116 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 TIMM17BO60830 172 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 FABP2P12104 132 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 TSPEAR-AS2P59090 65 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 RPL24P83731 157 aaKnown RBP7.29□□□□□ -1.24
VPS25-206ENST00000591584 SAMD5Q5TGI4 173 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 ZFAND6Q6FIF0 208 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 CHCHD5Q9BSY4 110 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 NHP2Q9NX24 153 aaKnown RBP7.29□□□□□ -1.24
VPS25-206ENST00000591584 NF1P21359 2839 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 HIVEP1P15822 2718 aa7.29□□□□□ -1.24
VPS25-206ENST00000591584 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.28□□□□□ -1.24
VPS25-206ENST00000591584 IGLV5-39A0A0G2JS06 123 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 A0A0J9YXY3 114 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 A0A1W2PPM0 123 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 H3BUT2 72 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 IGHV3-30P01768 117 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 IGHV3-30-5P0DP03 117 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 CIRBPQ14011 172 aaKnown RBP7.28□□□□□ -1.24
VPS25-206ENST00000591584 RNASE13Q5GAN3 156 aaKnown RBP7.28□□□□□ -1.24
VPS25-206ENST00000591584 SVIPQ8NHG7 77 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 COPS9Q8WXC6 57 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 CDKN2A-AS1Q9UH64 79 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
VPS25-206ENST00000591584 SETD2Q9BYW2 2564 aaPredicted RBP7.27□□□□□ -1.25
VPS25-206ENST00000591584 NDUFA1O15239 70 aa7.27□□□□□ -1.25
VPS25-206ENST00000591584 GAGE6Q13070 117 aa7.27□□□□□ -1.25
VPS25-206ENST00000591584 MRPL23Q16540 153 aaKnown RBP7.27□□□□□ -1.25
VPS25-206ENST00000591584 TRAV13-1A0A0B4J241 112 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 IGLL5B9A064 214 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 H3BNG1 76 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 K7EP34 96 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 SPINK8P0C7L1 97 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 IFITM1P13164 125 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 HERV-K104P63124 156 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 LYRM7Q5U5X0 104 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 SFTA2Q6UW10 78 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 LINC01561Q8N1V8 128 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 C10orf126Q8N4M7 172 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 RAB37Q96AX2 223 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 SPANXDQ9BXN6 97 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 SPANXCQ9NY87 97 aa7.26□□□□□ -1.25
VPS25-206ENST00000591584 IGHV3-64A0A075B6Q5 118 aa7.25□□□□□ -1.25
VPS25-206ENST00000591584 TRAV8-3A0A0A6YYJ7 113 aa7.25□□□□□ -1.25
VPS25-206ENST00000591584 KRTAP10-11P60412 298 aa7.25□□□□□ -1.25
VPS25-206ENST00000591584 C11orf68Q9H3H3 251 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms