RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PCNX1Q96RV3 2341 aa10.87□□□□□ -0.67
SMARCA4-214ENST00000589677 C4orf3Q8WVX3 66 aa10.86□□□□□ -0.67
SMARCA4-214ENST00000589677 CUL9Q8IWT3 2517 aa10.86□□□□□ -0.67
SMARCA4-214ENST00000589677 LYRM9A8MSI8 78 aa10.86□□□□□ -0.67
SMARCA4-214ENST00000589677 SMIM11BQ8TCY0 68 aa10.86□□□□□ -0.67
SMARCA4-214ENST00000589677 LINC01548A6NM66 108 aa10.85□□□□□ -0.67
SMARCA4-214ENST00000589677 NRGNQ92686 78 aa10.85□□□□□ -0.67
SMARCA4-214ENST00000589677 UBE2D4Q9Y2X8 147 aa10.85□□□□□ -0.67
SMARCA4-214ENST00000589677 PIEZO1Q92508 2521 aa10.85□□□□□ -0.67
SMARCA4-214ENST00000589677 CCKP06307 115 aa10.85□□□□□ -0.67
SMARCA4-214ENST00000589677 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
SMARCA4-214ENST00000589677 DEFB121Q5J5C9 76 aa10.85□□□□□ -0.67
SMARCA4-214ENST00000589677 IGLV4-69A0A075B6H9 119 aa10.84□□□□□ -0.67
SMARCA4-214ENST00000589677 PRR9Q5T870 116 aa10.84□□□□□ -0.67
SMARCA4-214ENST00000589677 Q6ZTI0 123 aa10.84□□□□□ -0.67
SMARCA4-214ENST00000589677 POM121L12Q8N7R1 296 aa10.84□□□□□ -0.67
SMARCA4-214ENST00000589677 KLK12Q9UKR0 248 aa10.84□□□□□ -0.67
SMARCA4-214ENST00000589677 ABCA4P78363 2273 aa10.84□□□□□ -0.67
SMARCA4-214ENST00000589677 COX8CQ7Z4L0 72 aa10.84□□□□□ -0.67
SMARCA4-214ENST00000589677 MIFP14174 115 aa10.83□□□□□ -0.68
SMARCA4-214ENST00000589677 BRCA2P51587 3418 aa10.83□□□□□ -0.68
SMARCA4-214ENST00000589677 PLCE1Q9P212 2302 aa10.83□□□□□ -0.68
SMARCA4-214ENST00000589677 KLLNB2CW77 178 aa10.83□□□□□ -0.68
SMARCA4-214ENST00000589677 C9orf85Q96MD7 179 aa10.83□□□□□ -0.68
SMARCA4-214ENST00000589677 PSMG3-AS1Q96PY0 264 aa10.83□□□□□ -0.68
SMARCA4-214ENST00000589677 IGHV4-30-2A0A087WSY4 118 aa10.82□□□□□ -0.68
SMARCA4-214ENST00000589677 MED12LQ86YW9 2145 aa10.82□□□□□ -0.68
SMARCA4-214ENST00000589677 NUP210LQ5VU65 1888 aa10.82□□□□□ -0.68
SMARCA4-214ENST00000589677 TNCP24821 2201 aa10.82□□□□□ -0.68
SMARCA4-214ENST00000589677 TRBV7-7A0A0K0K1E9 115 aa10.82□□□□□ -0.68
SMARCA4-214ENST00000589677 CRYGDP07320 174 aa10.82□□□□□ -0.68
SMARCA4-214ENST00000589677 REG3AQ06141 175 aa10.82□□□□□ -0.68
SMARCA4-214ENST00000589677 FBXL19-AS1Q494R0 122 aa10.82□□□□□ -0.68
SMARCA4-214ENST00000589677 C9orf66Q5T8R8 295 aa10.81□□□□□ -0.68
SMARCA4-214ENST00000589677 CHCHD10Q8WYQ3 142 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-214ENST00000589677 LINC00269Q8N2A0 174 aa10.81□□□□□ -0.68
SMARCA4-214ENST00000589677 H0Y9J4 135 aa10.8□□□□□ -0.68
SMARCA4-214ENST00000589677 ATG2AQ2TAZ0 1938 aa10.8□□□□□ -0.68
SMARCA4-214ENST00000589677 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.79□□□□□ -0.688e-7■■■■□ 21.9
SMARCA4-214ENST00000589677 RPL28P46779 137 aaKnown RBP10.79□□□□□ -0.68
SMARCA4-214ENST00000589677 PROK1P58294 105 aa10.79□□□□□ -0.68
SMARCA4-214ENST00000589677 TRBV6-8A0A0A6YYG3 113 aa10.79□□□□□ -0.68
SMARCA4-214ENST00000589677 WISP2O76076 250 aa10.79□□□□□ -0.68
SMARCA4-214ENST00000589677 TRBV6-4A0A1B0GX49 114 aa10.79□□□□□ -0.68
SMARCA4-214ENST00000589677 TSPEAR-AS2P59090 65 aa10.79□□□□□ -0.68
SMARCA4-214ENST00000589677 ESM1Q9NQ30 184 aa10.79□□□□□ -0.68
SMARCA4-214ENST00000589677 IGLV2-18A0A075B6J9 118 aa10.78□□□□□ -0.68
SMARCA4-214ENST00000589677 PPDPFQ9H3Y8 114 aa10.78□□□□□ -0.68
SMARCA4-214ENST00000589677 SHISA2Q6UWI4 295 aa10.78□□□□□ -0.68
SMARCA4-214ENST00000589677 Q6ZQY7 126 aa10.77□□□□□ -0.68
SMARCA4-214ENST00000589677 Q8N6K4 173 aa10.77□□□□□ -0.69
SMARCA4-214ENST00000589677 A0A087WVE0 104 aa10.76□□□□□ -0.69
SMARCA4-214ENST00000589677 LOC107984640A0A0U1RRK4 108 aa10.76□□□□□ -0.69
SMARCA4-214ENST00000589677 TNFRSF13BO14836 293 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-214ENST00000589677 UBE2AP49459 152 aa10.76□□□□□ -0.69
SMARCA4-214ENST00000589677 KIAA1549Q9HCM3 1950 aa10.76□□□□□ -0.69
SMARCA4-214ENST00000589677 ADORA2A-AS1P86434 159 aa10.76□□□□□ -0.69
SMARCA4-214ENST00000589677 KLK5Q9Y337 293 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-214ENST00000589677 SEC61GP60059 68 aa10.75□□□□□ -0.69
SMARCA4-214ENST00000589677 LMO4P61968 165 aa10.75□□□□□ -0.69
SMARCA4-214ENST00000589677 MED13LQ71F56 2210 aa10.75□□□□□ -0.69
SMARCA4-214ENST00000589677 A6NED7 52 aa10.75□□□□□ -0.69
SMARCA4-214ENST00000589677 COX17Q14061 63 aa10.75□□□□□ -0.69
SMARCA4-214ENST00000589677 MUC7Q8TAX7 377 aa10.74□□□□□ -0.69
SMARCA4-214ENST00000589677 CCL18P55774 89 aa10.74□□□□□ -0.69
SMARCA4-214ENST00000589677 IGKV4-1P06312 121 aa10.74□□□□□ -0.69
SMARCA4-214ENST00000589677 NTM-AS1Q6ZSK4 140 aa10.74□□□□□ -0.69
SMARCA4-214ENST00000589677 PCDH15Q96QU1 1955 aa10.74□□□□□ -0.69
SMARCA4-214ENST00000589677 MUC22E2RYF6 1773 aaPredicted RBP10.74□□□□□ -0.69
SMARCA4-214ENST00000589677 HCFC1P51610 2035 aa10.73□□□□□ -0.69
SMARCA4-214ENST00000589677 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.73□□□□□ -0.69
SMARCA4-214ENST00000589677 LINC01546A6NGU7 62 aa10.73□□□□□ -0.69
SMARCA4-214ENST00000589677 RPS28P62857 69 aaKnown RBP10.72□□□□□ -0.69
SMARCA4-214ENST00000589677 DEFB114Q30KQ6 69 aa10.72□□□□□ -0.69
SMARCA4-214ENST00000589677 PRO0461Q9UI25 63 aa10.72□□□□□ -0.69
SMARCA4-214ENST00000589677 PRO0628Q9UI54 55 aa10.71□□□□□ -0.69
SMARCA4-214ENST00000589677 PLXNB1O43157 2135 aa10.71□□□□□ -0.69
SMARCA4-214ENST00000589677 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
SMARCA4-214ENST00000589677 ADAMTSL4-AS1Q5T5F5 129 aa10.71□□□□□ -0.69
SMARCA4-214ENST00000589677 C10orf142B7Z368 130 aa10.71□□□□□ -0.69
SMARCA4-214ENST00000589677 LINC00242Q5T6M2 205 aa10.71□□□□□ -0.69
SMARCA4-214ENST00000589677 CD164L2Q6UWJ8 174 aa10.71□□□□□ -0.69
SMARCA4-214ENST00000589677 PRR15LQ9BU68 103 aa10.71□□□□□ -0.69
SMARCA4-214ENST00000589677 C1orf158Q8N1D5 194 aa10.71□□□□□ -0.7
SMARCA4-214ENST00000589677 C22orf34Q6ZV56 151 aa10.7□□□□□ -0.7
SMARCA4-214ENST00000589677 CDC42SE2Q9NRR3 84 aa10.7□□□□□ -0.7
SMARCA4-214ENST00000589677 CRYGAP11844 174 aa10.7□□□□□ -0.7
SMARCA4-214ENST00000589677 Q6ZSV7 163 aa10.7□□□□□ -0.7
SMARCA4-214ENST00000589677 AMELXQ99217 191 aa10.7□□□□□ -0.7
SMARCA4-214ENST00000589677 Q8N814 137 aa10.7□□□□□ -0.7
SMARCA4-214ENST00000589677 PRORYQ9H606 182 aa10.7□□□□□ -0.7
SMARCA4-214ENST00000589677 FAM208BQ5VWN6 2430 aa10.7□□□□□ -0.7
SMARCA4-214ENST00000589677 PTPRQQ9UMZ3 2332 aa10.7□□□□□ -0.7
SMARCA4-214ENST00000589677 MKI67P46013 3256 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-214ENST00000589677 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-214ENST00000589677 MRGPRG-AS1Q2M3A8 158 aa10.69□□□□□ -0.7
SMARCA4-214ENST00000589677 DEFB135Q30KP9 77 aa10.69□□□□□ -0.7
SMARCA4-214ENST00000589677 LINC00959A0A1B0GUT2 108 aa10.69□□□□□ -0.7
SMARCA4-214ENST00000589677 SMIM1B2RUZ4 78 aa10.69□□□□□ -0.7
SMARCA4-214ENST00000589677 WFDC10BQ8IUB3 73 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms