RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 UBE2D2P62837 147 aa5.34□□□□□ -1.55
ZNF540-206ENST00000589117 CIRBPQ14011 172 aaKnown RBP5.34□□□□□ -1.55
ZNF540-206ENST00000589117 ZANQ9Y493 2812 aa5.34□□□□□ -1.55
ZNF540-206ENST00000589117 TEX15Q9BXT5 2789 aa5.34□□□□□ -1.55
ZNF540-206ENST00000589117 TRAV4A0A0B4J268 109 aa5.34□□□□□ -1.56
ZNF540-206ENST00000589117 USP17L23D6RBM5 183 aa5.34□□□□□ -1.56
ZNF540-206ENST00000589117 PRM2P04554 102 aa5.34□□□□□ -1.56
ZNF540-206ENST00000589117 ETDBQ3ZM63 59 aa5.34□□□□□ -1.56
ZNF540-206ENST00000589117 COPS9Q8WXC6 57 aa5.34□□□□□ -1.56
ZNF540-206ENST00000589117 VSIG2Q96IQ7 327 aa5.34□□□□□ -1.56
ZNF540-206ENST00000589117 NDUFA12Q9UI09 145 aa5.34□□□□□ -1.56
ZNF540-206ENST00000589117 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.33□□□□□ -1.56
ZNF540-206ENST00000589117 A0A0J9YXY3 114 aa5.33□□□□□ -1.56
ZNF540-206ENST00000589117 IGKV2-29A2NJV5 120 aaPredicted RBP5.33□□□□□ -1.56
ZNF540-206ENST00000589117 HERVK_113P63121 156 aa5.33□□□□□ -1.56
ZNF540-206ENST00000589117 MUSTN1Q8IVN3 82 aa5.33□□□□□ -1.56
ZNF540-206ENST00000589117 C1orf158Q8N1D5 194 aa5.33□□□□□ -1.56
ZNF540-206ENST00000589117 ATP6V0E2Q8NHE4 81 aa5.33□□□□□ -1.56
ZNF540-206ENST00000589117 LINC01006Q8NI28 216 aa5.33□□□□□ -1.56
ZNF540-206ENST00000589117 C16orf74Q96GX8 76 aa5.33□□□□□ -1.56
ZNF540-206ENST00000589117 CSDC2Q9Y534 153 aaKnown RBP5.33□□□□□ -1.56
ZNF540-206ENST00000589117 ZFYVE26Q68DK2 2539 aa5.33□□□□□ -1.56
ZNF540-206ENST00000589117 GAGE12HA6NDE8 117 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 K7EQD1 137 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 CEMP1Q6PRD7 247 aaPredicted RBP5.32□□□□□ -1.56
ZNF540-206ENST00000589117 ESM1Q9NQ30 184 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 IGHV3-38A0A0C4DH36 116 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 TIMM17BO60830 172 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 COX6CP09669 75 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 IFITM1P13164 125 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 Q1RN00 199 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 RNF183Q96D59 192 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 TMEM101Q96IK0 257 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 PRO0461Q9UI25 63 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 MYO9AB2RTY4 2548 aa5.32□□□□□ -1.56
ZNF540-206ENST00000589117 TRGV2A0A075B6R0 118 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 UBE2L6O14933 153 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 ZFAND6Q6FIF0 208 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 SFTA2Q6UW10 78 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 Q6ZUT4 128 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 SH2D6Q7Z4S9 175 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 ABCA12Q86UK0 2595 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 IL17DQ8TAD2 202 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 SIGMAR1Q99720 223 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 SPANXDQ9BXN6 97 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 SPANXCQ9NY87 97 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 J3QKU1 62 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 IGHV3-33P01772 117 aa5.31□□□□□ -1.56
ZNF540-206ENST00000589117 RNASE13Q5GAN3 156 aaKnown RBP5.31□□□□□ -1.56
ZNF540-206ENST00000589117 IGLV5-45A0A087WSX0 123 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 TRAV8-3A0A0A6YYJ7 113 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 H7C423 109 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 IGLV1-51P01701 117 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 SPINK8P0C7L1 97 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 MIAQ16674 131 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 Q6ZTI0 123 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 FAM104AQ969W3 186 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 GTSF1LQ9H1H1 148 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 NOP10Q9NPE3 64 aaKnown RBP5.3□□□□□ -1.56
ZNF540-206ENST00000589117 Q9UF83 564 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 TRBV6-4A0A1B0GX49 114 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 NDUFA7O95182 113 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 TCL1BO95988 128 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 HILS1P60008 231 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 FOXI1Q12951 378 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 ATXN8Q156A1 80 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 CDKN2A-AS1Q9UH64 79 aa5.3□□□□□ -1.56
ZNF540-206ENST00000589117 TRGV4A0A0C4DH28 118 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 H7C2G1 150 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 NDUFA1O15239 70 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 FAM19A3Q7Z5A8 133 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 TEN1Q86WV5 123 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 PPDPFLQ8WWR9 84 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 TMEM243Q9BU79 118 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 APCP25054 2843 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 TRBV30A0A0K0K1B3 111 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 GAGE12JA6NER3 117 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 M0QXV9 152 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 GAGE4Q13068 117 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 GAGE5Q13069 117 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 MTURNQ8N3F0 131 aa5.29□□□□□ -1.56
ZNF540-206ENST00000589117 SCGB1A1P11684 91 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 OVOL2Q9BRP0 275 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 TRAV13-1A0A0B4J241 112 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 TMEM262E9PQX1 116 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 GAGE7O76087 117 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 GAGE12FP0CL80 117 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 GAGE12GP0CL81 117 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 GAGE12IP0CL82 117 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 RPL35AP18077 110 aaKnown RBP5.28□□□□□ -1.56
ZNF540-206ENST00000589117 HERV-K104P63124 156 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 LINC00242Q5T6M2 205 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 LITAFQ99732 161 aa5.28□□□□□ -1.56
ZNF540-206ENST00000589117 SLC25A20O43772 301 aa5.27□□□□□ -1.57
ZNF540-206ENST00000589117 PLA2G2AP14555 144 aa5.27□□□□□ -1.57
ZNF540-206ENST00000589117 KRTAP1-1Q07627 177 aa5.27□□□□□ -1.57
ZNF540-206ENST00000589117 SBSPONQ8IVN8 264 aa5.27□□□□□ -1.57
ZNF540-206ENST00000589117 CDC42SE2Q9NRR3 84 aa5.27□□□□□ -1.57
ZNF540-206ENST00000589117 IGLV5-39A0A0G2JS06 123 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms