RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 LINC00336Q6ZUF6 198 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 ZNF575Q86XF7 245 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 PRIMA1Q86XR5 153 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 AKAP9Q99996 3911 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.13□□□□□ -1.27
LINC01539-201ENST00000587904 EPM2AB3EWF7 344 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 MED14OSP0DP75 135 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 KHDC1LQ5JSQ8 128 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 KLHL30-AS1Q8NEE0 82 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 DSCR8Q96T75 97 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 UPK3BQ9BT76 320 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 C11orf21Q9P2W6 132 aa7.13□□□□□ -1.27
LINC01539-201ENST00000587904 IGHV4-4A0A075B6R2 117 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 KLLNB2CW77 178 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 H7C423 109 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 SLURP1P55000 103 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 HILS1P60008 231 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 PRR9Q5T870 116 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 C1orf195Q5TG92 126 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 SERP2Q8N6R1 65 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 DEFB136Q30KP8 78 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 PAPPA-AS1Q5QFB9 102 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 NEXN-AS1Q8NBZ9 246 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 DPH3P1Q9H4G8 78 aa7.12□□□□□ -1.27
LINC01539-201ENST00000587904 SONP18583 2426 aaKnown RBP7.11□□□□□ -1.27
LINC01539-201ENST00000587904 A0A0J9YX75 114 aa7.11□□□□□ -1.27
LINC01539-201ENST00000587904 F6UB75 175 aa7.11□□□□□ -1.27
LINC01539-201ENST00000587904 ZNF22P17026 224 aaPredicted RBP7.11□□□□□ -1.27
LINC01539-201ENST00000587904 C18orf65Q6ZTR6 163 aa7.11□□□□□ -1.27
LINC01539-201ENST00000587904 PKIGQ9Y2B9 76 aa7.11□□□□□ -1.27
LINC01539-201ENST00000587904 RPL18AQ02543 176 aaKnown RBP7.1□□□□□ -1.27
LINC01539-201ENST00000587904 OXLD1Q5BKU9 147 aa7.1□□□□□ -1.27
LINC01539-201ENST00000587904 NDUFC2O95298 119 aa7.1□□□□□ -1.27
LINC01539-201ENST00000587904 RNASE4P34096 147 aaKnown RBP7.1□□□□□ -1.27
LINC01539-201ENST00000587904 DEFB1P60022 68 aa7.09□□□□□ -1.27
LINC01539-201ENST00000587904 C6orf226Q5I0X4 101 aa7.09□□□□□ -1.27
LINC01539-201ENST00000587904 LINC01006Q8NI28 216 aa7.09□□□□□ -1.27
LINC01539-201ENST00000587904 DYNLRB2Q8TF09 96 aa7.09□□□□□ -1.27
LINC01539-201ENST00000587904 ANK3Q12955 4377 aaKnown RBP7.09□□□□□ -1.28
LINC01539-201ENST00000587904 TEP1Q99973 2627 aaKnown RBP7.09□□□□□ -1.28
LINC01539-201ENST00000587904 TRAV12-2A0A075B6T6 113 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 COX6CP09669 75 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 S100A4P26447 101 aaKnown RBP7.08□□□□□ -1.28
LINC01539-201ENST00000587904 SPANXN1Q5VSR9 72 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 CYSTM1Q9H1C7 97 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 Q1RN00 199 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 ORMDL2Q53FV1 153 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 SMCR5Q8TEV8 140 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 TOMM6Q96B49 74 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 TP53TG1Q9Y2A0 90 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 ACANP16112 2415 aa7.08□□□□□ -1.28
LINC01539-201ENST00000587904 A8MTW9 85 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 CD28P10747 220 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 NPC2P61916 151 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 SCGB3A1Q96QR1 104 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 MSRB1Q9NZV6 116 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 SERP1Q9Y6X1 66 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 FAM236DA0A1B0GTK5 79 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 TMEM223A0PJW6 202 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 CCL24O00175 119 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 TRIAP1O43715 76 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
LINC01539-201ENST00000587904 NXPH4O95158 308 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 LY6G6DO95868 133 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 FAM236CP0DP71 79 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 DEFB114Q30KQ6 69 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 TMEM61Q8N0U2 210 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 PHLDA3Q9Y5J5 127 aa7.07□□□□□ -1.28
LINC01539-201ENST00000587904 LST1O00453 97 aa7.06□□□□□ -1.28
LINC01539-201ENST00000587904 HIVEP2P31629 2446 aa7.06□□□□□ -1.28
LINC01539-201ENST00000587904 DAND5Q8N907 189 aa7.05□□□□□ -1.28
LINC01539-201ENST00000587904 NRACQ8N912 160 aa7.05□□□□□ -1.28
LINC01539-201ENST00000587904 MTORP42345 2549 aa7.05□□□□□ -1.28
LINC01539-201ENST00000587904 GAS8-AS1O95177 125 aa7.05□□□□□ -1.28
LINC01539-201ENST00000587904 RNASE3P12724 160 aaKnown RBP7.05□□□□□ -1.28
LINC01539-201ENST00000587904 NF1P21359 2839 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 TRAV12-3A0A0B4J271 114 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 PROK1P58294 105 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 DEFB131AP59861 70 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 SMR3AQ99954 134 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 ICOSQ9Y6W8 199 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 IGHV1OR15-1A0A075B7D0 117 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 A0A1W2PRX2 142 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 C11orf86A6NJI1 115 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 M0R381 172 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 MAP6D1Q9H9H5 199 aa7.04□□□□□ -1.28
LINC01539-201ENST00000587904 HIVEP1P15822 2718 aa7.03□□□□□ -1.28
LINC01539-201ENST00000587904 H7C2G1 150 aa7.03□□□□□ -1.28
LINC01539-201ENST00000587904 GNRH2O43555 120 aa7.03□□□□□ -1.28
LINC01539-201ENST00000587904 PPP1R17O96001 155 aa7.03□□□□□ -1.28
LINC01539-201ENST00000587904 SPINK13Q1W4C9 94 aa7.03□□□□□ -1.28
LINC01539-201ENST00000587904 AMELXQ99217 191 aa7.03□□□□□ -1.28
LINC01539-201ENST00000587904 SMIM2Q9BVW6 85 aa7.03□□□□□ -1.28
LINC01539-201ENST00000587904 IGKV3-20P01619 116 aa7.02□□□□□ -1.29
LINC01539-201ENST00000587904 GATA1P15976 413 aaPredicted RBP7.02□□□□□ -1.29
LINC01539-201ENST00000587904 CMC4P56277 68 aaPredicted RBP7.02□□□□□ -1.29
LINC01539-201ENST00000587904 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
LINC01539-201ENST00000587904 C11orf44Q8N8P7 122 aa7.02□□□□□ -1.29
LINC01539-201ENST00000587904 IGHV3-16A0A0C4DH30 117 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms