RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 TRAV40A0A0B4J280 105 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 PNMA8CA0A1B0GUJ8 204 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 C3orf84H3BNL1 204 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 GEMIN2O14893 280 aaKnown RBP2.39□□□□□ -2.03
NF1-220ENST00000581113 CD3DP04234 171 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 CTSDP07339 412 aaPredicted RBP2.39□□□□□ -2.03
NF1-220ENST00000581113 CRYGAP11844 174 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 IFITM1P13164 125 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 RPS27P42677 84 aaKnown RBP2.39□□□□□ -2.03
NF1-220ENST00000581113 RPL28P46779 137 aaKnown RBP2.39□□□□□ -2.03
NF1-220ENST00000581113 GNGT1P63211 74 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 SS18Q15532 418 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 C9orf153Q5TBE3 101 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 ZNF660Q6AZW8 331 aaPredicted RBP2.39□□□□□ -2.03
NF1-220ENST00000581113 SDIM1Q6ZPB5 146 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 DEFB107AQ8IZN7 70 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 TTC9CQ8N5M4 171 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 DIRC1Q969H9 104 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 AGPAT4-IT1Q9H0P7 198 aa2.39□□□□□ -2.03
NF1-220ENST00000581113 TANC2Q9HCD6 1990 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 TENM1Q9UKZ4 2725 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 TRGV10A0A0A0MS01 117 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 MUC21A0A0G2JKD1 596 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 OOSP1A8MZH6 123 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 GYPAP02724 150 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 GYPBP06028 91 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 FUSP35637 526 aaKnown RBP eCLIP2.38□□□□□ -2.03
NF1-220ENST00000581113 HIST1H4AP62805 103 aaKnown RBP2.38□□□□□ -2.03
NF1-220ENST00000581113 DEFB112Q30KQ8 113 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 BRD3OSQ6XYD6 125 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 ZNF826PQ6ZT77 177 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 Q6ZUT4 128 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 AQP3Q92482 292 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 CMC2Q9NRP2 79 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 RPRMQ9NS64 109 aa2.38□□□□□ -2.03
NF1-220ENST00000581113 MGAM2Q2M2H8 2515 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 WNK2Q9Y3S1 2297 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 TRRAPQ9Y4A5 3859 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 ARHGAP32A7KAX9 2087 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 TRAV12-2A0A075B6T6 113 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 IGHV3-73A0A0B4J1V6 119 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 TRAV3A0A0B4J244 114 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 C17orf98A8MV24 154 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 LHBP01229 141 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 SLC25A4P12235 298 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 BLCAPP62952 87 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 ZNF90Q03938 601 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 KLRD1Q13241 179 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 KHDC3LQ587J8 217 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 LINC01590Q5TEZ4 76 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 SVBPQ8N300 66 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 AMELYQ99218 206 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 XAGE1AQ9HD64 81 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 KAAG1Q9UBP8 84 aa2.37□□□□□ -2.03
NF1-220ENST00000581113 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.36□□□□□ -2.03
NF1-220ENST00000581113 CLPSL1A2RUU4 121 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 GNGT2O14610 69 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 TIMM17BO60830 172 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 ZNF737O75373 536 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 ZNF22P17026 224 aaPredicted RBP2.36□□□□□ -2.03
NF1-220ENST00000581113 AKR1C1Q04828 323 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 CIRBPQ14011 172 aaKnown RBP2.36□□□□□ -2.03
NF1-220ENST00000581113 MIAQ16674 131 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 FOXI2Q6ZQN5 318 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 VMO1Q7Z5L0 202 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 ATOH7Q8N100 152 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 FAM216BQ8N7L0 139 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 OTOSQ8NHW6 89 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 CLEC2BQ92478 149 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 CHCHD1Q96BP2 118 aaKnown RBP2.36□□□□□ -2.03
NF1-220ENST00000581113 GAFA1Q96PS6 74 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 SLC35B3Q9H1N7 401 aa2.36□□□□□ -2.03
NF1-220ENST00000581113 MEGF8Q7Z7M0 2845 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 TRBV20-1A0A075B6N2 111 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 M0R1W7 72 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 MRPS14O60783 128 aaKnown RBP2.35□□□□□ -2.03
NF1-220ENST00000581113 TFF1P04155 84 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 XCL1P47992 114 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 CAV3P56539 151 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 LYZL1Q6UWQ5 148 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 LYZL2Q7Z4W2 148 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 Q8N2B8 174 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 RNF5Q99942 180 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 NAA60Q9H7X0 242 aa2.35□□□□□ -2.03
NF1-220ENST00000581113 TCRBV3S1A0A5B6 114 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 GRIFINA4D1Z8 144 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 MCRIP1C9JLW8 97 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 NPYP01303 97 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 PMP2P02689 132 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 MT-ATP8P03928 68 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 ZNF705BP0CI00 300 aaPredicted RBP2.34□□□□□ -2.03
NF1-220ENST00000581113 TPT1P13693 172 aaKnown RBP2.34□□□□□ -2.03
NF1-220ENST00000581113 FABP4P15090 132 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 PRB3Q04118 309 aaPredicted RBP2.34□□□□□ -2.03
NF1-220ENST00000581113 ZNF846Q147U1 533 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 Q56UQ5 140 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 Q6AWC8 147 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 HCP5Q6MZN7 132 aa2.34□□□□□ -2.03
NF1-220ENST00000581113 Q8NDZ9 215 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms