RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 C12orf74Q32Q52 190 aa12.52□□□□□ -0.41
TMCO1-207ENST00000580248 SAMD5Q5TGI4 173 aa12.52□□□□□ -0.41
TMCO1-207ENST00000580248 ANK2Q01484 3957 aa12.52□□□□□ -0.41
TMCO1-207ENST00000580248 IGHV3-38A0A0C4DH36 116 aa12.51□□□□□ -0.41
TMCO1-207ENST00000580248 K7EP34 96 aa12.51□□□□□ -0.41
TMCO1-207ENST00000580248 FABP2P12104 132 aa12.51□□□□□ -0.41
TMCO1-207ENST00000580248 SRSF9Q13242 221 aaKnown RBP eCLIP12.51□□□□□ -0.41
TMCO1-207ENST00000580248 OR5A1Q8NGJ0 315 aa12.51□□□□□ -0.41
TMCO1-207ENST00000580248 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.51□□□□□ -0.41
TMCO1-207ENST00000580248 TRBV6-4A0A1B0GX49 114 aa12.51□□□□□ -0.41
TMCO1-207ENST00000580248 IGKV2-29A2NJV5 120 aaPredicted RBP12.51□□□□□ -0.41
TMCO1-207ENST00000580248 UBE2D3P61077 147 aa12.51□□□□□ -0.41
TMCO1-207ENST00000580248 UBE2D2P62837 147 aa12.51□□□□□ -0.41
TMCO1-207ENST00000580248 CSDC2Q9Y534 153 aaKnown RBP12.51□□□□□ -0.41
TMCO1-207ENST00000580248 TRGV2A0A075B6R0 118 aa12.5□□□□□ -0.41
TMCO1-207ENST00000580248 TSPEAR-AS2P59090 65 aa12.5□□□□□ -0.41
TMCO1-207ENST00000580248 SLC25A29Q8N8R3 303 aa12.5□□□□□ -0.41
TMCO1-207ENST00000580248 DGAT2L7PQ6IED9 249 aa12.49□□□□□ -0.41
TMCO1-207ENST00000580248 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
TMCO1-207ENST00000580248 GTSF1LQ9H1H1 148 aa12.49□□□□□ -0.41
TMCO1-207ENST00000580248 GAGE12BA1L429 117 aa12.48□□□□□ -0.41
TMCO1-207ENST00000580248 GAGE7O76087 117 aa12.48□□□□□ -0.41
TMCO1-207ENST00000580248 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
TMCO1-207ENST00000580248 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
TMCO1-207ENST00000580248 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
TMCO1-207ENST00000580248 OXLD1Q5BKU9 147 aa12.48□□□□□ -0.41
TMCO1-207ENST00000580248 TIRAPP58753 221 aa12.48□□□□□ -0.41
TMCO1-207ENST00000580248 SMIM9A6NGZ8 99 aa12.47□□□□□ -0.41
TMCO1-207ENST00000580248 IGLL5B9A064 214 aa12.47□□□□□ -0.41
TMCO1-207ENST00000580248 K7ERJ3 54 aa12.47□□□□□ -0.41
TMCO1-207ENST00000580248 Q6ZUT4 128 aa12.47□□□□□ -0.41
TMCO1-207ENST00000580248 SPCS1Q9Y6A9 102 aa12.47□□□□□ -0.41
TMCO1-207ENST00000580248 KIR2DL5BQ8NHK3 375 aa12.46□□□□□ -0.41
TMCO1-207ENST00000580248 NOTCH3Q9UM47 2321 aa12.46□□□□□ -0.42
TMCO1-207ENST00000580248 IGHV1-58A0A0C4DH39 117 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 H7C423 109 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 UBE2D1P51668 147 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 GAGE4Q13068 117 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 GAGE5Q13069 117 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 GAGE13Q4V321 117 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 FAM19A3Q7Z5A8 133 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 SBSPONQ8IVN8 264 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 TRGV4A0A0C4DH28 118 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 IGHV3-30-3P0DP02 117 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 NAA38Q9BRA0 125 aaKnown RBP12.45□□□□□ -0.42
TMCO1-207ENST00000580248 GEMIN7Q9H840 131 aaKnown RBP12.45□□□□□ -0.42
TMCO1-207ENST00000580248 PKD1L1Q8TDX9 2849 aa12.45□□□□□ -0.42
TMCO1-207ENST00000580248 IGLV5-45A0A087WSX0 123 aa12.43□□□□□ -0.42
TMCO1-207ENST00000580248 IGHV3-30P01768 117 aa12.43□□□□□ -0.42
TMCO1-207ENST00000580248 IGHV3-30-5P0DP03 117 aa12.43□□□□□ -0.42
TMCO1-207ENST00000580248 EGFEM1PQ0D2K5 195 aa12.43□□□□□ -0.42
TMCO1-207ENST00000580248 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
TMCO1-207ENST00000580248 NTM-AS1Q6ZSK4 140 aa12.43□□□□□ -0.42
TMCO1-207ENST00000580248 LINC00612Q8N6U2 182 aa12.43□□□□□ -0.42
TMCO1-207ENST00000580248 TMEM238C9JI98 176 aa12.42□□□□□ -0.42
TMCO1-207ENST00000580248 VSIG2Q96IQ7 327 aa12.42□□□□□ -0.42
TMCO1-207ENST00000580248 HERVK_113P63121 156 aa12.42□□□□□ -0.42
TMCO1-207ENST00000580248 FHL2Q14192 279 aa12.42□□□□□ -0.42
TMCO1-207ENST00000580248 TMEM243Q9BU79 118 aa12.42□□□□□ -0.42
TMCO1-207ENST00000580248 G3V4G9 280 aa12.41□□□□□ -0.42
TMCO1-207ENST00000580248 IGHV3-64A0A075B6Q5 118 aa12.4□□□□□ -0.42
TMCO1-207ENST00000580248 UBE2L6O14933 153 aa12.4□□□□□ -0.42
TMCO1-207ENST00000580248 KRTAP10-11P60412 298 aa12.4□□□□□ -0.42
TMCO1-207ENST00000580248 TMEM101Q96IK0 257 aa12.4□□□□□ -0.43
TMCO1-207ENST00000580248 CMYA5Q8N3K9 4069 aa12.39□□□□□ -0.43
TMCO1-207ENST00000580248 A0A0J9YXY3 114 aa12.39□□□□□ -0.43
TMCO1-207ENST00000580248 LINC00694P0DN24 101 aa12.39□□□□□ -0.43
TMCO1-207ENST00000580248 CDC42SE2Q9NRR3 84 aa12.39□□□□□ -0.43
TMCO1-207ENST00000580248 X6R8D5 127 aa12.39□□□□□ -0.43
TMCO1-207ENST00000580248 APOC4P55056 127 aa12.38□□□□□ -0.43
TMCO1-207ENST00000580248 RPL24P83731 157 aaKnown RBP12.38□□□□□ -0.43
TMCO1-207ENST00000580248 C10orf126Q8N4M7 172 aa12.38□□□□□ -0.43
TMCO1-207ENST00000580248 TRAV8-3A0A0A6YYJ7 113 aa12.37□□□□□ -0.43
TMCO1-207ENST00000580248 ZFAND6Q6FIF0 208 aa12.37□□□□□ -0.43
TMCO1-207ENST00000580248 NDUFA12Q9UI09 145 aa12.37□□□□□ -0.43
TMCO1-207ENST00000580248 LINC00242Q5T6M2 205 aa12.37□□□□□ -0.43
TMCO1-207ENST00000580248 PGPEP1Q9NXJ5 209 aa12.37□□□□□ -0.43
TMCO1-207ENST00000580248 CDKN2A-AS1Q9UH64 79 aa12.37□□□□□ -0.43
TMCO1-207ENST00000580248 LYRM9A8MSI8 78 aa12.36□□□□□ -0.43
TMCO1-207ENST00000580248 SPINK8P0C7L1 97 aa12.36□□□□□ -0.43
TMCO1-207ENST00000580248 LOC100131303A0A0U1RQF7 123 aa12.35□□□□□ -0.43
TMCO1-207ENST00000580248 TIMM17BO60830 172 aa12.35□□□□□ -0.43
TMCO1-207ENST00000580248 LYRM7Q5U5X0 104 aa12.35□□□□□ -0.43
TMCO1-207ENST00000580248 SPANXDQ9BXN6 97 aa12.35□□□□□ -0.43
TMCO1-207ENST00000580248 SPANXCQ9NY87 97 aa12.35□□□□□ -0.43
TMCO1-207ENST00000580248 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.34□□□□□ -0.43
TMCO1-207ENST00000580248 TRBV6-8A0A0A6YYG3 113 aa12.34□□□□□ -0.43
TMCO1-207ENST00000580248 APOMO95445 188 aa12.34□□□□□ -0.43
TMCO1-207ENST00000580248 CFC1BP0CG36 223 aa12.34□□□□□ -0.43
TMCO1-207ENST00000580248 CFC1P0CG37 223 aa12.34□□□□□ -0.43
TMCO1-207ENST00000580248 IGLV5-39A0A0G2JS06 123 aa12.33□□□□□ -0.44
TMCO1-207ENST00000580248 DEFB130BP0DP73 79 aa12.33□□□□□ -0.44
TMCO1-207ENST00000580248 DEFB130AP0DP74 79 aa12.33□□□□□ -0.44
TMCO1-207ENST00000580248 OCIAD2Q56VL3 154 aa12.33□□□□□ -0.44
TMCO1-207ENST00000580248 A0A0B4J2C4 111 aa12.32□□□□□ -0.44
TMCO1-207ENST00000580248 F8W1H4 67 aa12.32□□□□□ -0.44
TMCO1-207ENST00000580248 NDUFA1O15239 70 aa12.32□□□□□ -0.44
TMCO1-207ENST00000580248 COX6A2Q02221 97 aa12.32□□□□□ -0.44
TMCO1-207ENST00000580248 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms