RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 RHODO00212 210 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 INSL3P51460 131 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 SLC25A29Q8N8R3 303 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 MAP6D1Q9H9H5 199 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 HIVEP2P31629 2446 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 TRGV1A0A0A0MS02 117 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 LEPROTO15243 131 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 INSP01308 110 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 Q75L30 129 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 PRO1854Q9UHT4 67 aa3.89□□□□□ -1.79
VAPA-203ENST00000577539 TMEM223A0PJW6 202 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 IGHV3-30P01768 117 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 SPINK8P0C7L1 97 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 CFC1BP0CG36 223 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 CFC1P0CG37 223 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 IGHV3-30-5P0DP03 117 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 UBE2D1P51668 147 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 MUSTN1Q8IVN3 82 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 NFE4Q86UQ8 179 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 C10orf126Q8N4M7 172 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 SIGMAR1Q99720 223 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 ERG28Q9UKR5 140 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 IGHV3-30-3P0DP02 117 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 AZU1P20160 251 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 DEFB114Q30KQ6 69 aa3.88□□□□□ -1.79
VAPA-203ENST00000577539 FLNAP21333 2647 aaKnown RBP3.88□□□□□ -1.79
VAPA-203ENST00000577539 TCL1BO95988 128 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 CFAP126Q5VTH2 177 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 Q6ZUT4 128 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 ZNF843Q8N446 348 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 ZNF625Q96I27 306 aaPredicted RBP3.87□□□□□ -1.79
VAPA-203ENST00000577539 NDUFA12Q9UI09 145 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 CHD6Q8TD26 2715 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 Q6ZSV7 163 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 WFDC11Q8NEX6 87 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 C4orf3Q8WVX3 66 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 LINC00467Q9BRT7 94 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 MXRA5Q9NR99 2828 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 ZFHX3Q15911 3703 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 A0A0J9YXY3 114 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 C9JAW5 83 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 C5orf47Q569G3 176 aa3.87□□□□□ -1.79
VAPA-203ENST00000577539 FSHBP01225 129 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 RPL35AP18077 110 aaKnown RBP3.86□□□□□ -1.79
VAPA-203ENST00000577539 VPS13CQ709C8 3753 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 TRAV13-1A0A0B4J241 112 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 IGKV3OR2-268A0A0C4DH90 116 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 ODF3L2Q3SX64 289 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 DAND5Q8N907 189 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 PRO0461Q9UI25 63 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 ITPR3Q14573 2671 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 GAGE12JA6NER3 117 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 GAGE4Q13068 117 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 GAGE5Q13069 117 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 AMELXQ99217 191 aa3.86□□□□□ -1.79
VAPA-203ENST00000577539 CSMD2Q7Z408 3487 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 TRBV20-1A0A075B6N2 111 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.85□□□□□ -1.79
VAPA-203ENST00000577539 DNAJC9-AS1A6NH13 148 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 C1QTNF4Q9BXJ3 329 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 SPANXA1Q9NS26 97 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 FBN2P35556 2912 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 TRGV2A0A075B6R0 118 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 IGHV1-58A0A0C4DH39 117 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 IGHV3-33P01772 117 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 UBE2D3P61077 147 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 UBE2D2P62837 147 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
VAPA-203ENST00000577539 Q6ZTI0 123 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 LINC00336Q6ZUF6 198 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 RPL36ALQ969Q0 106 aaKnown RBP3.85□□□□□ -1.79
VAPA-203ENST00000577539 CHCHD7Q9BUK0 85 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 CDKN2A-AS1Q9UH64 79 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 PYGO1Q9Y3Y4 419 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 WFDC10AQ9H1F0 79 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 NOP10Q9NPE3 64 aaKnown RBP3.85□□□□□ -1.79
VAPA-203ENST00000577539 UBE2D4Q9Y2X8 147 aa3.85□□□□□ -1.79
VAPA-203ENST00000577539 SLC25A20O43772 301 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 GAGE7O76087 117 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 GAGE12FP0CL80 117 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 GAGE12GP0CL81 117 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 GAGE12IP0CL82 117 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 MRPS36P82909 103 aaKnown RBP3.84□□□□□ -1.79
VAPA-203ENST00000577539 C11orf72Q8NBR9 251 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 PPDPFLQ8WWR9 84 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 NF1P21359 2839 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 MEIG1Q5JSS6 88 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 ADAMTSL4-AS1Q5T5F5 129 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 TEN1Q86WV5 123 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 VSIG2Q96IQ7 327 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 CR1P17927 2039 aa3.84□□□□□ -1.79
VAPA-203ENST00000577539 UBE2L6O14933 153 aa3.84□□□□□ -1.8
VAPA-203ENST00000577539 C1orf158Q8N1D5 194 aa3.84□□□□□ -1.8
VAPA-203ENST00000577539 ANKRD29Q8N6D5 301 aa3.84□□□□□ -1.8
VAPA-203ENST00000577539 TMEM263Q8WUH6 116 aaKnown RBP3.84□□□□□ -1.8
VAPA-203ENST00000577539 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
VAPA-203ENST00000577539 COX6CP09669 75 aa3.83□□□□□ -1.8
VAPA-203ENST00000577539 CIRBPQ14011 172 aaKnown RBP3.83□□□□□ -1.8
VAPA-203ENST00000577539 Q8N2B8 174 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms