RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 A4D1N5 150 aa10.09□□□□□ -0.79
RAB40B-211ENST00000576359 IGLV1-51P01701 117 aa10.09□□□□□ -0.79
RAB40B-211ENST00000576359 ZNF418Q8TF45 676 aaPredicted RBP10.09□□□□□ -0.79
RAB40B-211ENST00000576359 C19orf73Q9NVV2 129 aa10.09□□□□□ -0.79
RAB40B-211ENST00000576359 A0A0J9YXY3 114 aa10.09□□□□□ -0.79
RAB40B-211ENST00000576359 PSMB2P49721 201 aa10.09□□□□□ -0.79
RAB40B-211ENST00000576359 PRO1854Q9UHT4 67 aa10.09□□□□□ -0.79
RAB40B-211ENST00000576359 TINCRA0A1B0GVN0 87 aa10.08□□□□□ -0.8
RAB40B-211ENST00000576359 Q6ZTI0 123 aa10.08□□□□□ -0.8
RAB40B-211ENST00000576359 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
RAB40B-211ENST00000576359 MUSTN1Q8IVN3 82 aa10.08□□□□□ -0.8
RAB40B-211ENST00000576359 JMJD1CQ15652 2540 aa10.07□□□□□ -0.8
RAB40B-211ENST00000576359 EIF4EBP3O60516 100 aaPredicted RBP10.07□□□□□ -0.8
RAB40B-211ENST00000576359 TMEM263Q8WUH6 116 aaKnown RBP10.07□□□□□ -0.8
RAB40B-211ENST00000576359 FASNP49327 2511 aaKnown RBP10.06□□□□□ -0.8
RAB40B-211ENST00000576359 NDUFA7O95182 113 aa10.06□□□□□ -0.8
RAB40B-211ENST00000576359 KRTAP10-3P60369 221 aa10.06□□□□□ -0.8
RAB40B-211ENST00000576359 LYRM7Q5U5X0 104 aa10.06□□□□□ -0.8
RAB40B-211ENST00000576359 A8MZ25 164 aa10.06□□□□□ -0.8
RAB40B-211ENST00000576359 SPINK8P0C7L1 97 aa10.06□□□□□ -0.8
RAB40B-211ENST00000576359 VSIG2Q96IQ7 327 aa10.06□□□□□ -0.8
RAB40B-211ENST00000576359 PLAC8L1A1L4L8 177 aa10.05□□□□□ -0.8
RAB40B-211ENST00000576359 RPL35AP18077 110 aaKnown RBP10.05□□□□□ -0.8
RAB40B-211ENST00000576359 SMCPP49901 116 aaPredicted RBP10.05□□□□□ -0.8
RAB40B-211ENST00000576359 NDUFA12Q9UI09 145 aa10.05□□□□□ -0.8
RAB40B-211ENST00000576359 TCL1BO95988 128 aa10.05□□□□□ -0.8
RAB40B-211ENST00000576359 GEMIN7Q9H840 131 aaKnown RBP10.05□□□□□ -0.8
RAB40B-211ENST00000576359 J3QR89 54 aa10.04□□□□□ -0.8
RAB40B-211ENST00000576359 DGAT2L7PQ6IED9 249 aa10.04□□□□□ -0.8
RAB40B-211ENST00000576359 LITAFQ99732 161 aa10.04□□□□□ -0.8
RAB40B-211ENST00000576359 FAM110AQ9BQ89 295 aa10.04□□□□□ -0.8
RAB40B-211ENST00000576359 NOP10Q9NPE3 64 aaKnown RBP10.04□□□□□ -0.8
RAB40B-211ENST00000576359 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
RAB40B-211ENST00000576359 IGHV3-33P01772 117 aa10.03□□□□□ -0.8
RAB40B-211ENST00000576359 SCGB1C2P0DMR2 95 aa10.03□□□□□ -0.8
RAB40B-211ENST00000576359 INSL3P51460 131 aa10.03□□□□□ -0.8
RAB40B-211ENST00000576359 CMC4P56277 68 aaPredicted RBP10.03□□□□□ -0.8
RAB40B-211ENST00000576359 GCN1Q92616 2671 aaKnown RBP10.03□□□□□ -0.8
RAB40B-211ENST00000576359 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
RAB40B-211ENST00000576359 GAGE12HA6NDE8 117 aa10.03□□□□□ -0.8
RAB40B-211ENST00000576359 K7EQD1 137 aa10.03□□□□□ -0.8
RAB40B-211ENST00000576359 RPL36AP83881 106 aaKnown RBP10.03□□□□□ -0.8
RAB40B-211ENST00000576359 CSNK1G2-AS1Q8NCQ2 148 aa10.03□□□□□ -0.8
RAB40B-211ENST00000576359 RPL36ALQ969Q0 106 aaKnown RBP10.03□□□□□ -0.8
RAB40B-211ENST00000576359 CDKN2A-AS1Q9UH64 79 aa10.03□□□□□ -0.8
RAB40B-211ENST00000576359 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.8
RAB40B-211ENST00000576359 H7C2G1 150 aa10.02□□□□□ -0.8
RAB40B-211ENST00000576359 LINC00694P0DN24 101 aa10.02□□□□□ -0.8
RAB40B-211ENST00000576359 ADAMTSL4-AS1Q5T5F5 129 aa10.02□□□□□ -0.8
RAB40B-211ENST00000576359 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.81
RAB40B-211ENST00000576359 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
RAB40B-211ENST00000576359 LY6G6DO95868 133 aa10.02□□□□□ -0.81
RAB40B-211ENST00000576359 PRSS2P07478 247 aa10.02□□□□□ -0.81
RAB40B-211ENST00000576359 DAZ2Q13117 558 aaKnown RBP10.02□□□□□ -0.81
RAB40B-211ENST00000576359 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.02□□□□□ -0.81
RAB40B-211ENST00000576359 ERG28Q9UKR5 140 aa10.02□□□□□ -0.81
RAB40B-211ENST00000576359 C2CD3Q4AC94 2353 aa10.01□□□□□ -0.81
RAB40B-211ENST00000576359 TIRAPP58753 221 aa10.01□□□□□ -0.81
RAB40B-211ENST00000576359 NTM-AS1Q6ZSK4 140 aa10.01□□□□□ -0.81
RAB40B-211ENST00000576359 C16orf74Q96GX8 76 aa10.01□□□□□ -0.81
RAB40B-211ENST00000576359 OTOGQ6ZRI0 2925 aa10.01□□□□□ -0.81
RAB40B-211ENST00000576359 IGLV5-45A0A087WSX0 123 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 GAGE12JA6NER3 117 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 COX6A2Q02221 97 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 GAGE4Q13068 117 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 GAGE5Q13069 117 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 ZFAND6Q6FIF0 208 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 C1QTNF4Q9BXJ3 329 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 HIVEP2P31629 2446 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
RAB40B-211ENST00000576359 SPANXDQ9BXN6 97 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 DAZ3Q9NR90 486 aaKnown RBP10□□□□□ -0.81
RAB40B-211ENST00000576359 SPANXCQ9NY87 97 aa10□□□□□ -0.81
RAB40B-211ENST00000576359 GAGE7O76087 117 aa9.99□□□□□ -0.81
RAB40B-211ENST00000576359 GAGE12FP0CL80 117 aa9.99□□□□□ -0.81
RAB40B-211ENST00000576359 GAGE12GP0CL81 117 aa9.99□□□□□ -0.81
RAB40B-211ENST00000576359 GAGE12IP0CL82 117 aa9.99□□□□□ -0.81
RAB40B-211ENST00000576359 FOXI1Q12951 378 aa9.99□□□□□ -0.81
RAB40B-211ENST00000576359 LINC00242Q5T6M2 205 aa9.99□□□□□ -0.81
RAB40B-211ENST00000576359 ATP6V0E2Q8NHE4 81 aa9.99□□□□□ -0.81
RAB40B-211ENST00000576359 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
RAB40B-211ENST00000576359 MIAQ16674 131 aa9.98□□□□□ -0.81
RAB40B-211ENST00000576359 Q1RN00 199 aa9.98□□□□□ -0.81
RAB40B-211ENST00000576359 NPC2P61916 151 aa9.98□□□□□ -0.81
RAB40B-211ENST00000576359 LINC00482Q8N8I6 264 aa9.98□□□□□ -0.81
RAB40B-211ENST00000576359 HECTD1Q9ULT8 2610 aa9.98□□□□□ -0.81
RAB40B-211ENST00000576359 HERVK_113P63121 156 aa9.97□□□□□ -0.81
RAB40B-211ENST00000576359 SBSPONQ8IVN8 264 aa9.97□□□□□ -0.81
RAB40B-211ENST00000576359 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
RAB40B-211ENST00000576359 TRGV2A0A075B6R0 118 aa9.97□□□□□ -0.81
RAB40B-211ENST00000576359 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
RAB40B-211ENST00000576359 SPATA25Q9BR10 227 aa9.97□□□□□ -0.81
RAB40B-211ENST00000576359 OVOL2Q9BRP0 275 aa9.97□□□□□ -0.81
RAB40B-211ENST00000576359 TRAV13-1A0A0B4J241 112 aa9.96□□□□□ -0.81
RAB40B-211ENST00000576359 NDUFA1O15239 70 aa9.96□□□□□ -0.81
RAB40B-211ENST00000576359 SPATA3Q8NHX4 192 aa9.96□□□□□ -0.81
RAB40B-211ENST00000576359 PF4P02776 101 aa9.96□□□□□ -0.82
RAB40B-211ENST00000576359 TEN1Q86WV5 123 aa9.95□□□□□ -0.82
RAB40B-211ENST00000576359 IGLV5-39A0A0G2JS06 123 aa9.95□□□□□ -0.82
RAB40B-211ENST00000576359 TIMM17BO60830 172 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms