RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 GAGE10A6NGK3 116 aa10□□□□□ -0.81
VPS33B-208ENST00000574755 CIDEAO60543 219 aa10□□□□□ -0.81
VPS33B-208ENST00000574755 TEP1Q99973 2627 aaKnown RBP9.99□□□□□ -0.81
VPS33B-208ENST00000574755 TINCRA0A1B0GVN0 87 aa9.99□□□□□ -0.81
VPS33B-208ENST00000574755 TRBV6-4A0A1B0GX49 114 aa9.99□□□□□ -0.81
VPS33B-208ENST00000574755 A0A1W2PPM0 123 aa9.99□□□□□ -0.81
VPS33B-208ENST00000574755 C12orf74Q32Q52 190 aa9.99□□□□□ -0.81
VPS33B-208ENST00000574755 SAMD5Q5TGI4 173 aa9.99□□□□□ -0.81
VPS33B-208ENST00000574755 NTM-AS1Q6ZSK4 140 aa9.99□□□□□ -0.81
VPS33B-208ENST00000574755 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
VPS33B-208ENST00000574755 GTF2H5Q6ZYL4 71 aa9.98□□□□□ -0.81
VPS33B-208ENST00000574755 LINC00694P0DN24 101 aa9.97□□□□□ -0.81
VPS33B-208ENST00000574755 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
VPS33B-208ENST00000574755 IGHV3-30-3P0DP02 117 aa9.97□□□□□ -0.81
VPS33B-208ENST00000574755 GEMIN7Q9H840 131 aaKnown RBP9.97□□□□□ -0.81
VPS33B-208ENST00000574755 TMEM238LA0A1B0GVL6 79 aa9.96□□□□□ -0.81
VPS33B-208ENST00000574755 A6NJY4 79 aa9.96□□□□□ -0.81
VPS33B-208ENST00000574755 DEFB130BP0DP73 79 aa9.96□□□□□ -0.81
VPS33B-208ENST00000574755 DEFB130AP0DP74 79 aa9.96□□□□□ -0.81
VPS33B-208ENST00000574755 FABP2P12104 132 aa9.96□□□□□ -0.81
VPS33B-208ENST00000574755 UBE2D1P51668 147 aa9.96□□□□□ -0.81
VPS33B-208ENST00000574755 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.82
VPS33B-208ENST00000574755 K7EP34 96 aa9.95□□□□□ -0.82
VPS33B-208ENST00000574755 FHL2Q14192 279 aa9.95□□□□□ -0.82
VPS33B-208ENST00000574755 SPANXB1Q9NS25 103 aaPredicted RBP9.95□□□□□ -0.82
VPS33B-208ENST00000574755 SPCS1Q9Y6A9 102 aa9.95□□□□□ -0.82
VPS33B-208ENST00000574755 OR5A1Q8NGJ0 315 aa9.95□□□□□ -0.82
VPS33B-208ENST00000574755 KIR2DL5BQ8NHK3 375 aa9.95□□□□□ -0.82
VPS33B-208ENST00000574755 GTSF1LQ9H1H1 148 aa9.95□□□□□ -0.82
VPS33B-208ENST00000574755 X6R8D5 127 aa9.95□□□□□ -0.82
VPS33B-208ENST00000574755 IGHV1-58A0A0C4DH39 117 aa9.94□□□□□ -0.82
VPS33B-208ENST00000574755 A0A1B0GWB2 263 aa9.94□□□□□ -0.82
VPS33B-208ENST00000574755 UBE2L6O14933 153 aa9.94□□□□□ -0.82
VPS33B-208ENST00000574755 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
VPS33B-208ENST00000574755 IGLL5B9A064 214 aa9.94□□□□□ -0.82
VPS33B-208ENST00000574755 SPINK8P0C7L1 97 aa9.94□□□□□ -0.82
VPS33B-208ENST00000574755 SBSPONQ8IVN8 264 aa9.94□□□□□ -0.82
VPS33B-208ENST00000574755 TMEM243Q9BU79 118 aa9.94□□□□□ -0.82
VPS33B-208ENST00000574755 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
VPS33B-208ENST00000574755 SMIM9A6NGZ8 99 aa9.93□□□□□ -0.82
VPS33B-208ENST00000574755 SMAGPQ0VAQ4 97 aa9.93□□□□□ -0.82
VPS33B-208ENST00000574755 F8P00451 2351 aa9.93□□□□□ -0.82
VPS33B-208ENST00000574755 IGHV3-30P01768 117 aa9.93□□□□□ -0.82
VPS33B-208ENST00000574755 IGHV3-30-5P0DP03 117 aa9.93□□□□□ -0.82
VPS33B-208ENST00000574755 DEFB135Q30KP9 77 aa9.93□□□□□ -0.82
VPS33B-208ENST00000574755 VSIG2Q96IQ7 327 aa9.93□□□□□ -0.82
VPS33B-208ENST00000574755 CDKN2A-AS1Q9UH64 79 aa9.93□□□□□ -0.82
VPS33B-208ENST00000574755 C10orf126Q8N4M7 172 aa9.92□□□□□ -0.82
VPS33B-208ENST00000574755 APOC4P55056 127 aa9.92□□□□□ -0.82
VPS33B-208ENST00000574755 TIRAPP58753 221 aa9.92□□□□□ -0.82
VPS33B-208ENST00000574755 TRRAPQ9Y4A5 3859 aa9.91□□□□□ -0.82
VPS33B-208ENST00000574755 LINC00612Q8N6U2 182 aa9.91□□□□□ -0.82
VPS33B-208ENST00000574755 TMEM101Q96IK0 257 aa9.91□□□□□ -0.82
VPS33B-208ENST00000574755 CDC42SE2Q9NRR3 84 aa9.91□□□□□ -0.82
VPS33B-208ENST00000574755 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 A0A0J9YXY3 114 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 A8MZ25 164 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 TMEM238C9JI98 176 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 APOMO95445 188 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 HERVK_113P63121 156 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 COX6A2Q02221 97 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 LINC00242Q5T6M2 205 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 IGLV5-45A0A087WSX0 123 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 WFDC9Q8NEX5 89 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
VPS33B-208ENST00000574755 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
VPS33B-208ENST00000574755 FAM222AQ5U5X8 452 aa9.89□□□□□ -0.83
VPS33B-208ENST00000574755 TRBV6-8A0A0A6YYG3 113 aa9.88□□□□□ -0.83
VPS33B-208ENST00000574755 H7C423 109 aa9.88□□□□□ -0.83
VPS33B-208ENST00000574755 DEFB4AO15263 64 aa9.88□□□□□ -0.83
VPS33B-208ENST00000574755 GAGE6Q13070 117 aa9.87□□□□□ -0.83
VPS33B-208ENST00000574755 ZFAND6Q6FIF0 208 aa9.87□□□□□ -0.83
VPS33B-208ENST00000574755 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
VPS33B-208ENST00000574755 LYRM9A8MSI8 78 aa9.87□□□□□ -0.83
VPS33B-208ENST00000574755 GYPEP15421 78 aa9.87□□□□□ -0.83
VPS33B-208ENST00000574755 CHCHD5Q9BSY4 110 aa9.87□□□□□ -0.83
VPS33B-208ENST00000574755 CFC1BP0CG36 223 aa9.86□□□□□ -0.83
VPS33B-208ENST00000574755 CFC1P0CG37 223 aa9.86□□□□□ -0.83
VPS33B-208ENST00000574755 WIPF1O43516 503 aa9.86□□□□□ -0.83
VPS33B-208ENST00000574755 RPL24P83731 157 aaKnown RBP9.86□□□□□ -0.83
VPS33B-208ENST00000574755 MUSTN1Q8IVN3 82 aa9.86□□□□□ -0.83
VPS33B-208ENST00000574755 PRO0255Q9UI72 69 aa9.86□□□□□ -0.83
VPS33B-208ENST00000574755 BAHCC1Q9P281 2608 aa9.85□□□□□ -0.83
VPS33B-208ENST00000574755 IGHV4-28A0A0C4DH34 117 aa9.85□□□□□ -0.83
VPS33B-208ENST00000574755 A4D1N5 150 aa9.85□□□□□ -0.83
VPS33B-208ENST00000574755 ATP6V0E2Q8NHE4 81 aa9.85□□□□□ -0.83
VPS33B-208ENST00000574755 TSPAN13O95857 204 aa9.85□□□□□ -0.83
VPS33B-208ENST00000574755 IGHV4-30-4P0DP06 118 aa9.85□□□□□ -0.83
VPS33B-208ENST00000574755 LITAFQ99732 161 aa9.85□□□□□ -0.83
VPS33B-208ENST00000574755 IGLV5-39A0A0G2JS06 123 aa9.83□□□□□ -0.84
VPS33B-208ENST00000574755 SMIM1B2RUZ4 78 aa9.83□□□□□ -0.84
VPS33B-208ENST00000574755 PRSS2P07478 247 aa9.83□□□□□ -0.84
VPS33B-208ENST00000574755 IGLV4-60A0A075B6I1 120 aa9.83□□□□□ -0.84
VPS33B-208ENST00000574755 IGKV3OR2-268A0A0C4DH90 116 aa9.83□□□□□ -0.84
VPS33B-208ENST00000574755 NDUFA1O15239 70 aa9.83□□□□□ -0.84
VPS33B-208ENST00000574755 SFTA2Q6UW10 78 aa9.83□□□□□ -0.84
VPS33B-208ENST00000574755 PRO1854Q9UHT4 67 aa9.83□□□□□ -0.84
VPS33B-208ENST00000574755 H3BMG7 143 aa9.82□□□□□ -0.84
VPS33B-208ENST00000574755 PAX4O43316 350 aa9.82□□□□□ -0.84
VPS33B-208ENST00000574755 MIFP14174 115 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms