RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 TTC32Q5I0X7 151 aa7.53□□□□□ -1.2
USP43-205ENST00000574408 SHISA2Q6UWI4 295 aa7.53□□□□□ -1.2
USP43-205ENST00000574408 C1QTNF4Q9BXJ3 329 aa7.53□□□□□ -1.2
USP43-205ENST00000574408 MYMXA0A1B0GTQ4 84 aa7.53□□□□□ -1.2
USP43-205ENST00000574408 CRLF1O75462 422 aa7.53□□□□□ -1.2
USP43-205ENST00000574408 RNF183Q96D59 192 aa7.53□□□□□ -1.2
USP43-205ENST00000574408 LGALS3P17931 250 aaKnown RBP7.52□□□□□ -1.21
USP43-205ENST00000574408 HIGD1BQ9P298 99 aa7.52□□□□□ -1.21
USP43-205ENST00000574408 PAPPA-AS1Q5QFB9 102 aa7.52□□□□□ -1.21
USP43-205ENST00000574408 SPATA3Q8NHX4 192 aa7.52□□□□□ -1.21
USP43-205ENST00000574408 E9PLD3 99 aa7.52□□□□□ -1.21
USP43-205ENST00000574408 IGLV4-3A0A075B6K6 122 aa7.51□□□□□ -1.21
USP43-205ENST00000574408 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.51□□□□□ -1.21
USP43-205ENST00000574408 ZNF625Q96I27 306 aaPredicted RBP7.51□□□□□ -1.21
USP43-205ENST00000574408 DNAJC30Q96LL9 226 aa7.51□□□□□ -1.21
USP43-205ENST00000574408 HERVK_113P61574 105 aa7.51□□□□□ -1.21
USP43-205ENST00000574408 CEMP1Q6PRD7 247 aaPredicted RBP7.51□□□□□ -1.21
USP43-205ENST00000574408 CSNK1G2-AS1Q8NCQ2 148 aa7.51□□□□□ -1.21
USP43-205ENST00000574408 ZNRF2Q8NHG8 242 aa7.51□□□□□ -1.21
USP43-205ENST00000574408 C16orf74Q96GX8 76 aa7.51□□□□□ -1.21
USP43-205ENST00000574408 VCX2Q9H322 139 aa7.51□□□□□ -1.21
USP43-205ENST00000574408 VWFP04275 2813 aa7.51□□□□□ -1.21
USP43-205ENST00000574408 TENM1Q9UKZ4 2725 aa7.51□□□□□ -1.21
USP43-205ENST00000574408 SNCGO76070 127 aa7.5□□□□□ -1.21
USP43-205ENST00000574408 FOXI1Q12951 378 aa7.5□□□□□ -1.21
USP43-205ENST00000574408 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
USP43-205ENST00000574408 PLAC8L1A1L4L8 177 aa7.5□□□□□ -1.21
USP43-205ENST00000574408 IGKV2-29A2NJV5 120 aaPredicted RBP7.5□□□□□ -1.21
USP43-205ENST00000574408 GAGE7O76087 117 aa7.5□□□□□ -1.21
USP43-205ENST00000574408 GAGE12FP0CL80 117 aa7.5□□□□□ -1.21
USP43-205ENST00000574408 GAGE12GP0CL81 117 aa7.5□□□□□ -1.21
USP43-205ENST00000574408 GAGE12IP0CL82 117 aa7.5□□□□□ -1.21
USP43-205ENST00000574408 DAZ2Q13117 558 aaKnown RBP7.5□□□□□ -1.21
USP43-205ENST00000574408 CHCHD7Q9BUK0 85 aa7.5□□□□□ -1.21
USP43-205ENST00000574408 TRGV2A0A075B6R0 118 aa7.49□□□□□ -1.21
USP43-205ENST00000574408 TRAV4A0A0B4J268 109 aa7.49□□□□□ -1.21
USP43-205ENST00000574408 TEP1Q99973 2627 aaKnown RBP7.49□□□□□ -1.21
USP43-205ENST00000574408 K7EQD1 137 aa7.49□□□□□ -1.21
USP43-205ENST00000574408 C9orf66Q5T8R8 295 aa7.49□□□□□ -1.21
USP43-205ENST00000574408 PYGO1Q9Y3Y4 419 aa7.49□□□□□ -1.21
USP43-205ENST00000574408 A0A0J9YXV3 536 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 XGP55808 180 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 NTN5Q8WTR8 489 aaPredicted RBP7.48□□□□□ -1.21
USP43-205ENST00000574408 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 TRBV7-3A0A075B6L6 115 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 RPL36AP83881 106 aaKnown RBP7.48□□□□□ -1.21
USP43-205ENST00000574408 ZFAND6Q6FIF0 208 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 NFE4Q86UQ8 179 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 RPL36ALQ969Q0 106 aaKnown RBP7.48□□□□□ -1.21
USP43-205ENST00000574408 IGKV3OR2-268A0A0C4DH90 116 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 SLC25A29Q8N8R3 303 aa7.48□□□□□ -1.21
USP43-205ENST00000574408 FAM104AQ969W3 186 aa7.47□□□□□ -1.21
USP43-205ENST00000574408 GAGE12JA6NER3 117 aa7.47□□□□□ -1.21
USP43-205ENST00000574408 TCL1BO95988 128 aa7.47□□□□□ -1.21
USP43-205ENST00000574408 GAGE4Q13068 117 aa7.47□□□□□ -1.21
USP43-205ENST00000574408 GAGE5Q13069 117 aa7.47□□□□□ -1.21
USP43-205ENST00000574408 DAND5Q8N907 189 aa7.47□□□□□ -1.21
USP43-205ENST00000574408 SPANXA1Q9NS26 97 aa7.47□□□□□ -1.21
USP43-205ENST00000574408 UBE2D4Q9Y2X8 147 aa7.47□□□□□ -1.21
USP43-205ENST00000574408 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.21
USP43-205ENST00000574408 SMIM20Q8N5G0 67 aa7.46□□□□□ -1.21
USP43-205ENST00000574408 CITED1Q99966 193 aa7.46□□□□□ -1.21
USP43-205ENST00000574408 ZNF22P17026 224 aaPredicted RBP7.46□□□□□ -1.22
USP43-205ENST00000574408 TSPEAR-AS2P59090 65 aa7.46□□□□□ -1.22
USP43-205ENST00000574408 Q6ZUT4 128 aa7.46□□□□□ -1.22
USP43-205ENST00000574408 ANKRD29Q8N6D5 301 aa7.46□□□□□ -1.22
USP43-205ENST00000574408 AMELXQ99217 191 aa7.46□□□□□ -1.22
USP43-205ENST00000574408 OVOL2Q9BRP0 275 aa7.46□□□□□ -1.22
USP43-205ENST00000574408 TSPAN13O95857 204 aa7.46□□□□□ -1.22
USP43-205ENST00000574408 ERG28Q9UKR5 140 aa7.46□□□□□ -1.22
USP43-205ENST00000574408 TM2D2Q9BX73 214 aa7.45□□□□□ -1.22
USP43-205ENST00000574408 A4D1N5 150 aa7.45□□□□□ -1.22
USP43-205ENST00000574408 TAL2Q16559 108 aa7.45□□□□□ -1.22
USP43-205ENST00000574408 TRGV4A0A0C4DH28 118 aa7.45□□□□□ -1.22
USP43-205ENST00000574408 SLC25A20O43772 301 aa7.45□□□□□ -1.22
USP43-205ENST00000574408 LYRM7Q5U5X0 104 aa7.45□□□□□ -1.22
USP43-205ENST00000574408 DGAT2L7PQ6IED9 249 aa7.45□□□□□ -1.22
USP43-205ENST00000574408 TRAV8-3A0A0A6YYJ7 113 aa7.44□□□□□ -1.22
USP43-205ENST00000574408 TMEM223A0PJW6 202 aa7.44□□□□□ -1.22
USP43-205ENST00000574408 J3QQQ9 107 aa7.44□□□□□ -1.22
USP43-205ENST00000574408 UBE2D3P61077 147 aa7.44□□□□□ -1.22
USP43-205ENST00000574408 UBE2D2P62837 147 aa7.44□□□□□ -1.22
USP43-205ENST00000574408 HERV-K104P63124 156 aa7.44□□□□□ -1.22
USP43-205ENST00000574408 NBEAL2Q6ZNJ1 2754 aa7.44□□□□□ -1.22
USP43-205ENST00000574408 LOC100131303A0A0U1RQF7 123 aa7.44□□□□□ -1.22
USP43-205ENST00000574408 DAZ4Q86SG3 579 aaKnown RBP7.44□□□□□ -1.22
USP43-205ENST00000574408 DAZ3Q9NR90 486 aaKnown RBP7.44□□□□□ -1.22
USP43-205ENST00000574408 A8MZ25 164 aa7.43□□□□□ -1.22
USP43-205ENST00000574408 DEFB130BP0DP73 79 aa7.43□□□□□ -1.22
USP43-205ENST00000574408 DEFB130AP0DP74 79 aa7.43□□□□□ -1.22
USP43-205ENST00000574408 PPDPFLQ8WWR9 84 aa7.43□□□□□ -1.22
USP43-205ENST00000574408 MRPS36P82909 103 aaKnown RBP7.43□□□□□ -1.22
USP43-205ENST00000574408 NTM-AS1Q6ZSK4 140 aa7.43□□□□□ -1.22
USP43-205ENST00000574408 TEX49A0A1B0GTD5 131 aa7.43□□□□□ -1.22
USP43-205ENST00000574408 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
USP43-205ENST00000574408 PRO1854Q9UHT4 67 aa7.42□□□□□ -1.22
USP43-205ENST00000574408 TRBV6-4A0A1B0GX49 114 aa7.42□□□□□ -1.22
USP43-205ENST00000574408 LEPROTO15243 131 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms