RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TIMM21Q9BVV7 248 aa7.37□□□□□ -1.23
SMG6-213ENST00000573166 HIVEP1P15822 2718 aa7.37□□□□□ -1.23
SMG6-213ENST00000573166 K7EP13 123 aa7.37□□□□□ -1.23
SMG6-213ENST00000573166 SPINK8P0C7L1 97 aa7.37□□□□□ -1.23
SMG6-213ENST00000573166 XCL1P47992 114 aa7.37□□□□□ -1.23
SMG6-213ENST00000573166 PCP2Q8IVA1 136 aa7.37□□□□□ -1.23
SMG6-213ENST00000573166 C1orf43Q9BWL3 253 aa7.37□□□□□ -1.23
SMG6-213ENST00000573166 SLC25A29Q8N8R3 303 aa7.37□□□□□ -1.23
SMG6-213ENST00000573166 DKK2Q9UBU2 259 aa7.37□□□□□ -1.23
SMG6-213ENST00000573166 IGLV10-54A0A075B6I4 117 aa7.36□□□□□ -1.23
SMG6-213ENST00000573166 NOTCH1P46531 2555 aa7.36□□□□□ -1.23
SMG6-213ENST00000573166 FGF6P10767 208 aa7.36□□□□□ -1.23
SMG6-213ENST00000573166 ATXN8Q156A1 80 aa7.36□□□□□ -1.23
SMG6-213ENST00000573166 PRIMA1Q86XR5 153 aa7.36□□□□□ -1.23
SMG6-213ENST00000573166 SPANXA1Q9NS26 97 aa7.36□□□□□ -1.23
SMG6-213ENST00000573166 TRAV10A0A0B4J240 114 aa7.36□□□□□ -1.23
SMG6-213ENST00000573166 TRAV8-4A0A0B4J246 113 aa7.36□□□□□ -1.23
SMG6-213ENST00000573166 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
SMG6-213ENST00000573166 K7ERJ3 54 aa7.35□□□□□ -1.23
SMG6-213ENST00000573166 ETDBQ3ZM63 59 aa7.35□□□□□ -1.23
SMG6-213ENST00000573166 WFDC9Q8NEX5 89 aa7.35□□□□□ -1.23
SMG6-213ENST00000573166 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
SMG6-213ENST00000573166 NANOS2P60321 138 aaKnown RBP7.35□□□□□ -1.23
SMG6-213ENST00000573166 URB1-AS1Q96HZ7 61 aa7.35□□□□□ -1.23
SMG6-213ENST00000573166 C9orf85Q96MD7 179 aa7.35□□□□□ -1.23
SMG6-213ENST00000573166 KLK12Q9UKR0 248 aa7.35□□□□□ -1.23
SMG6-213ENST00000573166 RBMY1BA6NDE4 496 aaKnown RBP7.35□□□□□ -1.23
SMG6-213ENST00000573166 RBMY1EA6NEQ0 496 aaKnown RBP7.35□□□□□ -1.23
SMG6-213ENST00000573166 TAX1BP3O14907 124 aa7.35□□□□□ -1.23
SMG6-213ENST00000573166 RBMY1DP0C7P1 496 aaKnown RBP7.35□□□□□ -1.23
SMG6-213ENST00000573166 RBMY1A1P0DJD3 496 aaKnown RBP7.35□□□□□ -1.23
SMG6-213ENST00000573166 RBMY1CP0DJD4 496 aa7.35□□□□□ -1.23
SMG6-213ENST00000573166 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
SMG6-213ENST00000573166 RS1O15537 224 aa7.35□□□□□ -1.23
SMG6-213ENST00000573166 CRYBG3Q68DQ2 2970 aa7.34□□□□□ -1.23
SMG6-213ENST00000573166 PRSS29PA6NIE9 313 aa7.34□□□□□ -1.23
SMG6-213ENST00000573166 RNF183Q96D59 192 aa7.34□□□□□ -1.23
SMG6-213ENST00000573166 F8VRH5 84 aa7.34□□□□□ -1.23
SMG6-213ENST00000573166 K7EP34 96 aa7.34□□□□□ -1.23
SMG6-213ENST00000573166 TRBV6-4A0A1B0GX49 114 aa7.34□□□□□ -1.24
SMG6-213ENST00000573166 KRTAP10-3P60369 221 aa7.34□□□□□ -1.24
SMG6-213ENST00000573166 SIVA1O15304 175 aa7.33□□□□□ -1.24
SMG6-213ENST00000573166 C5orf38Q86SI9 138 aa7.33□□□□□ -1.24
SMG6-213ENST00000573166 C2orf82Q6UX34 121 aa7.33□□□□□ -1.24
SMG6-213ENST00000573166 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
SMG6-213ENST00000573166 A0A1W2PPM0 123 aa7.33□□□□□ -1.24
SMG6-213ENST00000573166 M0QY20 66 aa7.33□□□□□ -1.24
SMG6-213ENST00000573166 HERVK_113P63121 156 aa7.33□□□□□ -1.24
SMG6-213ENST00000573166 ZANQ9Y493 2812 aa7.33□□□□□ -1.24
SMG6-213ENST00000573166 MYMXA0A1B0GTQ4 84 aa7.32□□□□□ -1.24
SMG6-213ENST00000573166 F8W1H4 67 aa7.32□□□□□ -1.24
SMG6-213ENST00000573166 CRYGDP07320 174 aa7.32□□□□□ -1.24
SMG6-213ENST00000573166 NEXN-AS1Q8NBZ9 246 aa7.32□□□□□ -1.24
SMG6-213ENST00000573166 C9JAW5 83 aa7.32□□□□□ -1.24
SMG6-213ENST00000573166 KPRPQ5T749 579 aaPredicted RBP7.32□□□□□ -1.24
SMG6-213ENST00000573166 C20orf203Q8NBC4 194 aa7.32□□□□□ -1.24
SMG6-213ENST00000573166 TAL2Q16559 108 aa7.32□□□□□ -1.24
SMG6-213ENST00000573166 MUC4Q99102 2169 aa7.31□□□□□ -1.24
SMG6-213ENST00000573166 SCRT2Q9NQ03 307 aa7.31□□□□□ -1.24
SMG6-213ENST00000573166 A0A0J9YXV3 536 aa7.31□□□□□ -1.24
SMG6-213ENST00000573166 NPC2P61916 151 aa7.31□□□□□ -1.24
SMG6-213ENST00000573166 CLUHP3Q96NS8 147 aa7.31□□□□□ -1.24
SMG6-213ENST00000573166 CELSR2Q9HCU4 2923 aa7.31□□□□□ -1.24
SMG6-213ENST00000573166 LOC100131303A0A0U1RQF7 123 aa7.3□□□□□ -1.24
SMG6-213ENST00000573166 GAS8-AS1O95177 125 aa7.3□□□□□ -1.24
SMG6-213ENST00000573166 RBX1P62877 108 aa7.3□□□□□ -1.24
SMG6-213ENST00000573166 CEMP1Q6PRD7 247 aaPredicted RBP7.3□□□□□ -1.24
SMG6-213ENST00000573166 SMG1Q96Q15 3661 aaKnown RBP7.3□□□□□ -1.24
SMG6-213ENST00000573166 PFN2P35080 140 aa7.3□□□□□ -1.24
SMG6-213ENST00000573166 COX8CQ7Z4L0 72 aa7.3□□□□□ -1.24
SMG6-213ENST00000573166 BOD1L2Q8IYS8 172 aa7.3□□□□□ -1.24
SMG6-213ENST00000573166 SMIM20Q8N5G0 67 aa7.3□□□□□ -1.24
SMG6-213ENST00000573166 GHRHP01286 108 aa7.29□□□□□ -1.24
SMG6-213ENST00000573166 Q6ZTC4 211 aa7.29□□□□□ -1.24
SMG6-213ENST00000573166 RNF185Q96GF1 192 aa7.29□□□□□ -1.24
SMG6-213ENST00000573166 IGHV4-4A0A075B6R2 117 aa7.29□□□□□ -1.24
SMG6-213ENST00000573166 LINC01545Q5VT33 79 aa7.29□□□□□ -1.24
SMG6-213ENST00000573166 PPDPFLQ8WWR9 84 aa7.29□□□□□ -1.24
SMG6-213ENST00000573166 SS18L2Q9UHA2 77 aa7.29□□□□□ -1.24
SMG6-213ENST00000573166 PIK3CD-AS1Q5SR53 167 aa7.29□□□□□ -1.24
SMG6-213ENST00000573166 CEND1Q8N111 149 aa7.29□□□□□ -1.24
SMG6-213ENST00000573166 B5MCH6 92 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 H3BMG7 143 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 C15orf53Q8NAA6 179 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 MDFIQ99750 246 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 OPRPNQ99935 248 aaPredicted RBP7.28□□□□□ -1.24
SMG6-213ENST00000573166 CNFNQ9BYD5 112 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 TRBV6-8A0A0A6YYG3 113 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 COX7A2LO14548 114 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 TIMM17AQ99595 171 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 U3KQK5 164 aa7.28□□□□□ -1.24
SMG6-213ENST00000573166 NSD1Q96L73 2696 aaPredicted RBP7.27□□□□□ -1.25
SMG6-213ENST00000573166 RELNP78509 3460 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 KMT2BQ9UMN6 2715 aaPredicted RBP7.27□□□□□ -1.25
SMG6-213ENST00000573166 TRAV8-3A0A0A6YYJ7 113 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 NXPH4O95158 308 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 TOMM6Q96B49 74 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 LINC00467Q9BRT7 94 aa7.27□□□□□ -1.25
SMG6-213ENST00000573166 TM2D2Q9BX73 214 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms