RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PAX4O43316 350 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 DEFB121Q5J5C9 76 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 AMMECR1LQ6DCA0 310 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 LINC00612Q8N6U2 182 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 CHAC1Q9BUX1 264 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 PRO0255Q9UI72 69 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 F5H768 121 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 LINC00694P0DN24 101 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 Q6ZUT4 128 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 PYGO1Q9Y3Y4 419 aa4.98□□□□□ -1.61
SMG1-215ENST00000568239 TRBV25-1A0A075B6N4 114 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 A0A0J9YXV3 536 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 FGF6P10767 208 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 CRYBA4P53673 196 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 MRAPQ8TCY5 172 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 TMEM243Q9BU79 118 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 SPANXA1Q9NS26 97 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 IGHV3-64A0A075B6Q5 118 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 ATP5G1P05496 136 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 TMEM97Q5BJF2 176 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 SAMD5Q5TGI4 173 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 BOD1L2Q8IYS8 172 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 C2orf88Q9BSF0 95 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 CHCHD5Q9BSY4 110 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 MRPS16Q9Y3D3 137 aaKnown RBP4.97□□□□□ -1.61
SMG1-215ENST00000568239 CMYA5Q8N3K9 4069 aa4.97□□□□□ -1.61
SMG1-215ENST00000568239 TENM3Q9P273 2699 aa4.96□□□□□ -1.61
SMG1-215ENST00000568239 TRAV26-1A0A087WT03 109 aa4.96□□□□□ -1.61
SMG1-215ENST00000568239 GAGE6Q13070 117 aa4.96□□□□□ -1.61
SMG1-215ENST00000568239 MPV17L2Q567V2 206 aa4.96□□□□□ -1.61
SMG1-215ENST00000568239 ATP6V0E2Q8NHE4 81 aa4.96□□□□□ -1.61
SMG1-215ENST00000568239 C1orf43Q9BWL3 253 aa4.96□□□□□ -1.61
SMG1-215ENST00000568239 HERVK_113P61574 105 aa4.96□□□□□ -1.62
SMG1-215ENST00000568239 FAM104AQ969W3 186 aa4.96□□□□□ -1.62
SMG1-215ENST00000568239 TRBV6-8A0A0A6YYG3 113 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 TRAV13-1A0A0B4J241 112 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 IGKV3OR2-268A0A0C4DH90 116 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 A8MZ25 164 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 TMEM262E9PQX1 116 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 OR5A1Q8NGJ0 315 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 TMEM101Q96IK0 257 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 AMELXQ99217 191 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 GTSF1LQ9H1H1 148 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 C2orf91Q6ZV80 131 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 MAPKAPK5-AS1Q8N8E1 139 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 GEMIN7Q9H840 131 aaKnown RBP4.95□□□□□ -1.62
SMG1-215ENST00000568239 E9PLD3 99 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 SBSPONQ8IVN8 264 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 VSIG2Q96IQ7 327 aa4.95□□□□□ -1.62
SMG1-215ENST00000568239 A0A0J9YWU9 116 aa4.94□□□□□ -1.62
SMG1-215ENST00000568239 ZNF815PA8K554 130 aa4.94□□□□□ -1.62
SMG1-215ENST00000568239 F8WDY8 70 aa4.94□□□□□ -1.62
SMG1-215ENST00000568239 ZNF22P17026 224 aaPredicted RBP4.94□□□□□ -1.62
SMG1-215ENST00000568239 SMAGPQ0VAQ4 97 aa4.94□□□□□ -1.62
SMG1-215ENST00000568239 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
SMG1-215ENST00000568239 NFE4Q86UQ8 179 aa4.94□□□□□ -1.62
SMG1-215ENST00000568239 DLEU1O43261 78 aa4.93□□□□□ -1.62
SMG1-215ENST00000568239 MRPS36P82909 103 aaKnown RBP4.93□□□□□ -1.62
SMG1-215ENST00000568239 C12orf74Q32Q52 190 aa4.93□□□□□ -1.62
SMG1-215ENST00000568239 LBHQ53QV2 105 aaPredicted RBP4.93□□□□□ -1.62
SMG1-215ENST00000568239 TIMM21Q9BVV7 248 aa4.93□□□□□ -1.62
SMG1-215ENST00000568239 MYMXA0A1B0GTQ4 84 aa4.93□□□□□ -1.62
SMG1-215ENST00000568239 A0A1B0GV90 55 aa4.93□□□□□ -1.62
SMG1-215ENST00000568239 NPSP0C0P6 89 aa4.93□□□□□ -1.62
SMG1-215ENST00000568239 LGALS3P17931 250 aaKnown RBP4.93□□□□□ -1.62
SMG1-215ENST00000568239 CDC42SE2Q9NRR3 84 aa4.93□□□□□ -1.62
SMG1-215ENST00000568239 TRAV8-3A0A0A6YYJ7 113 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 TEX48A0A1B0GUV7 120 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 K7EIL1 84 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 ZNF25P17030 456 aaPredicted RBP4.92□□□□□ -1.62
SMG1-215ENST00000568239 UBE2D1P51668 147 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 COL5A1-AS1Q5SY13 56 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 Q6ZTC4 211 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 MRPL52Q86TS9 123 aaKnown RBP4.92□□□□□ -1.62
SMG1-215ENST00000568239 IGLV4-60A0A075B6I1 120 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 TINCRA0A1B0GVN0 87 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 TMEM223A0PJW6 202 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 SIVA1O15304 175 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 SPINK8P0C7L1 97 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 GCSHP23434 173 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 BVES-AS1Q5T3Y7 98 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 CSDC2Q9Y534 153 aaKnown RBP4.92□□□□□ -1.62
SMG1-215ENST00000568239 J3QQQ9 107 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 NANOS2P60321 138 aaKnown RBP4.92□□□□□ -1.62
SMG1-215ENST00000568239 MRPL23Q16540 153 aaKnown RBP4.92□□□□□ -1.62
SMG1-215ENST00000568239 CDKN2A-AS1Q9UH64 79 aa4.92□□□□□ -1.62
SMG1-215ENST00000568239 H7C423 109 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 TSPEAR-AS2P59090 65 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 COX6A2Q02221 97 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 CLPSL2Q6UWE3 100 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 C11orf45Q8TAV5 145 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 ICOSQ9Y6W8 199 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 HSD52Q0P140 79 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 LINC00242Q5T6M2 205 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 HIST1H4GQ99525 98 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 SPATA25Q9BR10 227 aa4.91□□□□□ -1.62
SMG1-215ENST00000568239 H3BRM9 83 aa4.9□□□□□ -1.62
SMG1-215ENST00000568239 IGHV3-30-3P0DP02 117 aa4.9□□□□□ -1.62
SMG1-215ENST00000568239 PTTG1IPP53801 180 aa4.9□□□□□ -1.62
SMG1-215ENST00000568239 Q6ZVH6 145 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms