RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 IGHV3-64A0A075B6Q5 118 aa12.13□□□□□ -0.47
CMTM3-213ENST00000566756 INAFM1C9JVW0 142 aa12.13□□□□□ -0.47
CMTM3-213ENST00000566756 SMAGPQ0VAQ4 97 aa12.13□□□□□ -0.47
CMTM3-213ENST00000566756 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
CMTM3-213ENST00000566756 LINC01587Q99440 93 aa12.13□□□□□ -0.47
CMTM3-213ENST00000566756 Q6ZSN1 163 aa12.12□□□□□ -0.47
CMTM3-213ENST00000566756 NSD1Q96L73 2696 aaPredicted RBP12.12□□□□□ -0.47
CMTM3-213ENST00000566756 TIMM17BO60830 172 aa12.12□□□□□ -0.47
CMTM3-213ENST00000566756 CITED2Q99967 270 aaPredicted RBP12.12□□□□□ -0.47
CMTM3-213ENST00000566756 NACAE9PAV3 2078 aa12.11□□□□□ -0.47
CMTM3-213ENST00000566756 TRBV30A0A0K0K1B3 111 aa12.11□□□□□ -0.47
CMTM3-213ENST00000566756 TIRAPP58753 221 aa12.11□□□□□ -0.47
CMTM3-213ENST00000566756 CARD19Q96LW7 228 aa12.11□□□□□ -0.47
CMTM3-213ENST00000566756 NDUFA12Q9UI09 145 aa12.11□□□□□ -0.47
CMTM3-213ENST00000566756 CUBNO60494 3623 aa12.11□□□□□ -0.47
CMTM3-213ENST00000566756 IGLV5-45A0A087WSX0 123 aa12.1□□□□□ -0.47
CMTM3-213ENST00000566756 CCL24O00175 119 aa12.1□□□□□ -0.47
CMTM3-213ENST00000566756 CDIP1Q9H305 208 aa12.1□□□□□ -0.47
CMTM3-213ENST00000566756 HIVEP1P15822 2718 aa12.1□□□□□ -0.47
CMTM3-213ENST00000566756 ZFAND6Q6FIF0 208 aa12.1□□□□□ -0.47
CMTM3-213ENST00000566756 MIAQ16674 131 aa12.09□□□□□ -0.47
CMTM3-213ENST00000566756 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
CMTM3-213ENST00000566756 C11orf44Q8N8P7 122 aa12.09□□□□□ -0.47
CMTM3-213ENST00000566756 TRAV8-3A0A0A6YYJ7 113 aa12.09□□□□□ -0.47
CMTM3-213ENST00000566756 SLC25A20O43772 301 aa12.09□□□□□ -0.47
CMTM3-213ENST00000566756 ATXN8Q156A1 80 aa12.09□□□□□ -0.47
CMTM3-213ENST00000566756 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
CMTM3-213ENST00000566756 CRLF1O75462 422 aa12.08□□□□□ -0.48
CMTM3-213ENST00000566756 IFITM1P13164 125 aa12.08□□□□□ -0.48
CMTM3-213ENST00000566756 Q6ZUT4 128 aa12.08□□□□□ -0.48
CMTM3-213ENST00000566756 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.48
CMTM3-213ENST00000566756 TMEM262E9PQX1 116 aa12.07□□□□□ -0.48
CMTM3-213ENST00000566756 CMC4P56277 68 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-213ENST00000566756 HIST2H2BDQ6DRA6 164 aa12.07□□□□□ -0.48
CMTM3-213ENST00000566756 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
CMTM3-213ENST00000566756 ANKRD29Q8N6D5 301 aa12.07□□□□□ -0.48
CMTM3-213ENST00000566756 Q9UF83 564 aa12.07□□□□□ -0.48
CMTM3-213ENST00000566756 SETXQ7Z333 2677 aaKnown RBP12.07□□□□□ -0.48
CMTM3-213ENST00000566756 FN1P02751 2386 aaKnown RBP12.07□□□□□ -0.48
CMTM3-213ENST00000566756 SETD2Q9BYW2 2564 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-213ENST00000566756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-213ENST00000566756 A0A1W2PRX2 142 aa12.07□□□□□ -0.48
CMTM3-213ENST00000566756 IGKV2-29A2NJV5 120 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-213ENST00000566756 PRM2P04554 102 aa12.07□□□□□ -0.48
CMTM3-213ENST00000566756 SORL1Q92673 2214 aa12.06□□□□□ -0.48
CMTM3-213ENST00000566756 WNK1Q9H4A3 2382 aa12.05□□□□□ -0.48
CMTM3-213ENST00000566756 TRBV10-1A0A0K0K1A3 114 aa12.05□□□□□ -0.48
CMTM3-213ENST00000566756 C9JAW5 83 aa12.05□□□□□ -0.48
CMTM3-213ENST00000566756 Q1RN00 199 aa12.05□□□□□ -0.48
CMTM3-213ENST00000566756 CSDC2Q9Y534 153 aaKnown RBP12.05□□□□□ -0.48
CMTM3-213ENST00000566756 ADARB2-AS1A8MUL3 147 aa12.05□□□□□ -0.48
CMTM3-213ENST00000566756 NDUFA1O15239 70 aa12.05□□□□□ -0.48
CMTM3-213ENST00000566756 ODF3L2Q3SX64 289 aa12.05□□□□□ -0.48
CMTM3-213ENST00000566756 RNASE13Q5GAN3 156 aaKnown RBP12.05□□□□□ -0.48
CMTM3-213ENST00000566756 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
CMTM3-213ENST00000566756 A0A1B0GV72 72 aa12.04□□□□□ -0.48
CMTM3-213ENST00000566756 SPINK8P0C7L1 97 aa12.04□□□□□ -0.48
CMTM3-213ENST00000566756 LINC01620Q4KN68 170 aa12.04□□□□□ -0.48
CMTM3-213ENST00000566756 DGAT2L7PQ6IED9 249 aa12.04□□□□□ -0.48
CMTM3-213ENST00000566756 STHQ8IWL8 128 aa12.04□□□□□ -0.48
CMTM3-213ENST00000566756 PRSS2P07478 247 aa12.03□□□□□ -0.48
CMTM3-213ENST00000566756 COX6CP09669 75 aa12.03□□□□□ -0.48
CMTM3-213ENST00000566756 HERVK_113P63121 156 aa12.03□□□□□ -0.48
CMTM3-213ENST00000566756 COPS9Q8WXC6 57 aa12.03□□□□□ -0.48
CMTM3-213ENST00000566756 FLNBO75369 2602 aaKnown RBP12.03□□□□□ -0.48
CMTM3-213ENST00000566756 CIRBPQ14011 172 aaKnown RBP12.03□□□□□ -0.48
CMTM3-213ENST00000566756 C1orf158Q8N1D5 194 aa12.03□□□□□ -0.48
CMTM3-213ENST00000566756 IGLV5-39A0A0G2JS06 123 aa12.02□□□□□ -0.49
CMTM3-213ENST00000566756 TRBV10-2A0A0K0K1G8 114 aa12.02□□□□□ -0.49
CMTM3-213ENST00000566756 H7C2G1 150 aa12.02□□□□□ -0.49
CMTM3-213ENST00000566756 TRIAP1O43715 76 aa12.02□□□□□ -0.49
CMTM3-213ENST00000566756 CIDEAO60543 219 aa12.02□□□□□ -0.49
CMTM3-213ENST00000566756 CDKN2A-AS1Q9UH64 79 aa12.02□□□□□ -0.49
CMTM3-213ENST00000566756 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.49
CMTM3-213ENST00000566756 C2CD3Q4AC94 2353 aa12.02□□□□□ -0.49
CMTM3-213ENST00000566756 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
CMTM3-213ENST00000566756 RPL13AP40429 203 aaKnown RBP12.01□□□□□ -0.49
CMTM3-213ENST00000566756 DAZ2Q13117 558 aaKnown RBP12.01□□□□□ -0.49
CMTM3-213ENST00000566756 DAZ4Q86SG3 579 aaKnown RBP12.01□□□□□ -0.49
CMTM3-213ENST00000566756 DAZ3Q9NR90 486 aaKnown RBP12.01□□□□□ -0.49
CMTM3-213ENST00000566756 RPL36AP83881 106 aaKnown RBP12.01□□□□□ -0.49
CMTM3-213ENST00000566756 RPL36ALQ969Q0 106 aaKnown RBP12.01□□□□□ -0.49
CMTM3-213ENST00000566756 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
CMTM3-213ENST00000566756 XCL2Q9UBD3 114 aa12.01□□□□□ -0.49
CMTM3-213ENST00000566756 IGHV3OR16-12A0A075B7B8 117 aa11.99□□□□□ -0.49
CMTM3-213ENST00000566756 TRAV4A0A0B4J268 109 aa11.99□□□□□ -0.49
CMTM3-213ENST00000566756 KRTAP10-3P60369 221 aa11.99□□□□□ -0.49
CMTM3-213ENST00000566756 K7EQD1 137 aa11.99□□□□□ -0.49
CMTM3-213ENST00000566756 PPDPFQ9H3Y8 114 aa11.99□□□□□ -0.49
CMTM3-213ENST00000566756 XGP55808 180 aa11.98□□□□□ -0.49
CMTM3-213ENST00000566756 TRGV1A0A0A0MS02 117 aa11.98□□□□□ -0.49
CMTM3-213ENST00000566756 A8MZ25 164 aa11.98□□□□□ -0.49
CMTM3-213ENST00000566756 H3BT86 120 aa11.98□□□□□ -0.49
CMTM3-213ENST00000566756 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
CMTM3-213ENST00000566756 F8P00451 2351 aa11.97□□□□□ -0.49
CMTM3-213ENST00000566756 MT-ATP8P03928 68 aa11.97□□□□□ -0.49
CMTM3-213ENST00000566756 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.96□□□□□ -0.49
CMTM3-213ENST00000566756 FAM110AQ9BQ89 295 aa11.96□□□□□ -0.49
CMTM3-213ENST00000566756 COX6A2Q02221 97 aa11.96□□□□□ -0.5
CMTM3-213ENST00000566756 IGLV1-51P01701 117 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms