RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 CMC4P56277 68 aaPredicted RBP13.38□□□□□ -0.27
MSLN-207ENST00000566549 SPANXB1Q9NS25 103 aaPredicted RBP13.38□□□□□ -0.27
MSLN-207ENST00000566549 PLAC8L1A1L4L8 177 aa13.38□□□□□ -0.27
MSLN-207ENST00000566549 LINC00694P0DN24 101 aa13.38□□□□□ -0.27
MSLN-207ENST00000566549 RPL36AP83881 106 aaKnown RBP13.38□□□□□ -0.27
MSLN-207ENST00000566549 RPL36ALQ969Q0 106 aaKnown RBP13.38□□□□□ -0.27
MSLN-207ENST00000566549 TRAV4A0A0B4J268 109 aa13.37□□□□□ -0.27
MSLN-207ENST00000566549 CRYBA4P53673 196 aa13.37□□□□□ -0.27
MSLN-207ENST00000566549 K7ERU9 68 aa13.36□□□□□ -0.27
MSLN-207ENST00000566549 TSPAN13O95857 204 aa13.36□□□□□ -0.27
MSLN-207ENST00000566549 C16orf74Q96GX8 76 aa13.36□□□□□ -0.27
MSLN-207ENST00000566549 FN1P02751 2386 aaKnown RBP13.36□□□□□ -0.27
MSLN-207ENST00000566549 TINCRA0A1B0GVN0 87 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 NDUFA11Q86Y39 141 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 CSNK1G2-AS1Q8NCQ2 148 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 VPS25Q9BRG1 176 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 GEMIN7Q9H840 131 aaKnown RBP13.35□□□□□ -0.27
MSLN-207ENST00000566549 VWFP04275 2813 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 LOC107984156A0A0G2JMH3 177 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 LOC100131303A0A0U1RQF7 123 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 INAFM1C9JVW0 142 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 CFC1BP0CG36 223 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 CFC1P0CG37 223 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 NTM-AS1Q6ZSK4 140 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 ARL17AQ8IVW1 177 aa13.35□□□□□ -0.27
MSLN-207ENST00000566549 RPL24P83731 157 aaKnown RBP13.34□□□□□ -0.27
MSLN-207ENST00000566549 DAZ2Q13117 558 aaKnown RBP13.34□□□□□ -0.27
MSLN-207ENST00000566549 IGHV1-58A0A0C4DH39 117 aa13.34□□□□□ -0.27
MSLN-207ENST00000566549 A0A0J9YXY3 114 aa13.34□□□□□ -0.27
MSLN-207ENST00000566549 FAM110AQ9BQ89 295 aa13.33□□□□□ -0.27
MSLN-207ENST00000566549 C1QTNF4Q9BXJ3 329 aa13.33□□□□□ -0.27
MSLN-207ENST00000566549 CDKN2A-AS1Q9UH64 79 aa13.33□□□□□ -0.27
MSLN-207ENST00000566549 A4D1N5 150 aa13.33□□□□□ -0.28
MSLN-207ENST00000566549 WFDC2Q14508 124 aa13.33□□□□□ -0.28
MSLN-207ENST00000566549 MUSTN1Q8IVN3 82 aa13.33□□□□□ -0.28
MSLN-207ENST00000566549 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.33□□□□□ -0.28
MSLN-207ENST00000566549 TRBV10-1A0A0K0K1A3 114 aa13.32□□□□□ -0.28
MSLN-207ENST00000566549 UBE2D3P61077 147 aa13.32□□□□□ -0.28
MSLN-207ENST00000566549 UBE2D2P62837 147 aa13.32□□□□□ -0.28
MSLN-207ENST00000566549 SPATA3Q8NHX4 192 aa13.32□□□□□ -0.28
MSLN-207ENST00000566549 VSIG2Q96IQ7 327 aa13.32□□□□□ -0.28
MSLN-207ENST00000566549 NDUFA12Q9UI09 145 aa13.32□□□□□ -0.28
MSLN-207ENST00000566549 COX6A2Q02221 97 aa13.31□□□□□ -0.28
MSLN-207ENST00000566549 LINC00482Q8N8I6 264 aa13.31□□□□□ -0.28
MSLN-207ENST00000566549 TMEM238C9JI98 176 aa13.31□□□□□ -0.28
MSLN-207ENST00000566549 TRAV13-1A0A0B4J241 112 aa13.3□□□□□ -0.28
MSLN-207ENST00000566549 DAZ4Q86SG3 579 aaKnown RBP13.3□□□□□ -0.28
MSLN-207ENST00000566549 DAZ3Q9NR90 486 aaKnown RBP13.3□□□□□ -0.28
MSLN-207ENST00000566549 TRGV4A0A0C4DH28 118 aa13.3□□□□□ -0.28
MSLN-207ENST00000566549 NPC2P61916 151 aa13.3□□□□□ -0.28
MSLN-207ENST00000566549 TEX48A0A1B0GUV7 120 aa13.29□□□□□ -0.28
MSLN-207ENST00000566549 H7C2G1 150 aa13.29□□□□□ -0.28
MSLN-207ENST00000566549 NBEAL2Q6ZNJ1 2754 aa13.29□□□□□ -0.28
MSLN-207ENST00000566549 EIF4EBP3O60516 100 aaPredicted RBP13.29□□□□□ -0.28
MSLN-207ENST00000566549 PRSS2P07478 247 aa13.29□□□□□ -0.28
MSLN-207ENST00000566549 PSMB2P49721 201 aa13.29□□□□□ -0.28
MSLN-207ENST00000566549 NSD1Q96L73 2696 aaPredicted RBP13.28□□□□□ -0.28
MSLN-207ENST00000566549 TENM1Q9UKZ4 2725 aa13.28□□□□□ -0.28
MSLN-207ENST00000566549 DEFB130BP0DP73 79 aa13.28□□□□□ -0.28
MSLN-207ENST00000566549 DEFB130AP0DP74 79 aa13.28□□□□□ -0.28
MSLN-207ENST00000566549 ADAMTSL4-AS1Q5T5F5 129 aa13.28□□□□□ -0.28
MSLN-207ENST00000566549 SH2D6Q7Z4S9 175 aa13.28□□□□□ -0.28
MSLN-207ENST00000566549 PRO1854Q9UHT4 67 aa13.28□□□□□ -0.28
MSLN-207ENST00000566549 F8W1H4 67 aa13.27□□□□□ -0.29
MSLN-207ENST00000566549 LITAFQ99732 161 aa13.27□□□□□ -0.29
MSLN-207ENST00000566549 LINC00242Q5T6M2 205 aa13.27□□□□□ -0.29
MSLN-207ENST00000566549 CRLF1O75462 422 aa13.26□□□□□ -0.29
MSLN-207ENST00000566549 OVOL2Q9BRP0 275 aa13.26□□□□□ -0.29
MSLN-207ENST00000566549 G3V4G9 280 aa13.25□□□□□ -0.29
MSLN-207ENST00000566549 UBE2L6O14933 153 aa13.25□□□□□ -0.29
MSLN-207ENST00000566549 ETDBQ3ZM63 59 aa13.25□□□□□ -0.29
MSLN-207ENST00000566549 SBSPONQ8IVN8 264 aa13.25□□□□□ -0.29
MSLN-207ENST00000566549 TMEM101Q96IK0 257 aa13.25□□□□□ -0.29
MSLN-207ENST00000566549 TIRAPP58753 221 aa13.24□□□□□ -0.29
MSLN-207ENST00000566549 DAND5Q8N907 189 aa13.24□□□□□ -0.29
MSLN-207ENST00000566549 PRO0461Q9UI25 63 aa13.24□□□□□ -0.29
MSLN-207ENST00000566549 TRBV6-4A0A1B0GX49 114 aa13.23□□□□□ -0.29
MSLN-207ENST00000566549 SCGB1C2P0DMR2 95 aa13.23□□□□□ -0.29
MSLN-207ENST00000566549 ZFAND6Q6FIF0 208 aa13.23□□□□□ -0.29
MSLN-207ENST00000566549 TMEM243Q9BU79 118 aa13.23□□□□□ -0.29
MSLN-207ENST00000566549 CDC42SE2Q9NRR3 84 aa13.23□□□□□ -0.29
MSLN-207ENST00000566549 IGLV5-45A0A087WSX0 123 aa13.23□□□□□ -0.29
MSLN-207ENST00000566549 HERVK_113P63121 156 aa13.23□□□□□ -0.29
MSLN-207ENST00000566549 FHL2Q14192 279 aa13.23□□□□□ -0.29
MSLN-207ENST00000566549 ZNF625Q96I27 306 aaPredicted RBP13.23□□□□□ -0.29
MSLN-207ENST00000566549 HIVEP1P15822 2718 aa13.23□□□□□ -0.29
MSLN-207ENST00000566549 TRRAPQ9Y4A5 3859 aa13.22□□□□□ -0.29
MSLN-207ENST00000566549 IGKV3OR2-268A0A0C4DH90 116 aa13.22□□□□□ -0.29
MSLN-207ENST00000566549 TCL1BO95988 128 aa13.22□□□□□ -0.29
MSLN-207ENST00000566549 GAGE6Q13070 117 aa13.21□□□□□ -0.29
MSLN-207ENST00000566549 Q1RN00 199 aa13.21□□□□□ -0.29
MSLN-207ENST00000566549 A0A0U1RRA0 63 aa13.21□□□□□ -0.3
MSLN-207ENST00000566549 IGHV3-33P01772 117 aa13.21□□□□□ -0.3
MSLN-207ENST00000566549 CSDC2Q9Y534 153 aaKnown RBP13.21□□□□□ -0.3
MSLN-207ENST00000566549 GTSF1LQ9H1H1 148 aa13.2□□□□□ -0.3
MSLN-207ENST00000566549 ERG28Q9UKR5 140 aa13.2□□□□□ -0.3
MSLN-207ENST00000566549 MIAQ16674 131 aa13.19□□□□□ -0.3
MSLN-207ENST00000566549 Q9H8V8 135 aa13.19□□□□□ -0.3
MSLN-207ENST00000566549 ATRQ13535 2644 aa13.19□□□□□ -0.3
MSLN-207ENST00000566549 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms