RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 TOP2AP11388 1531 aaKnown RBP2.16□□□□□ -2.06
RBFOX1-216ENST00000564850 SYCP2Q9BX26 1530 aa2.16□□□□□ -2.06
RBFOX1-216ENST00000564850 GBF1Q92538 1859 aa2.16□□□□□ -2.06
RBFOX1-216ENST00000564850 SIPA1L3O60292 1781 aaPredicted RBP2.15□□□□□ -2.06
RBFOX1-216ENST00000564850 ADAMTS9Q9P2N4 1935 aa2.15□□□□□ -2.06
RBFOX1-216ENST00000564850 CACNA1DQ01668 2161 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 XRN1Q8IZH2 1706 aaKnown RBP2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 IGKV3-7A0A075B6H7 116 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 CLPSL1A2RUU4 121 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 LEPROTL1O95214 131 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 PPP1R17O96001 155 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 ARMS2P0C7Q2 107 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 SPAG11BQ08648 103 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 Q6JHZ5 121 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 SPAG11AQ6PDA7 123 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 AMELXQ99217 191 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 ARL2-SNX15V9GYD0 113 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 ESPL1Q14674 2120 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 ZNF142P52746 1687 aaPredicted RBP2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 ADAMTS7Q9UKP4 1686 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 CUL9Q8IWT3 2517 aa2.15□□□□□ -2.07
RBFOX1-216ENST00000564850 PI4KAP42356 2102 aa2.14□□□□□ -2.07
RBFOX1-216ENST00000564850 A0A0D9SFI3 127 aa2.14□□□□□ -2.07
RBFOX1-216ENST00000564850 IGKV3-15P01624 115 aa2.14□□□□□ -2.07
RBFOX1-216ENST00000564850 DEFB134Q4QY38 66 aa2.14□□□□□ -2.07
RBFOX1-216ENST00000564850 BAGE3Q86Y29 109 aa2.14□□□□□ -2.07
RBFOX1-216ENST00000564850 BAGE2Q86Y30 109 aa2.14□□□□□ -2.07
RBFOX1-216ENST00000564850 HILPDAQ9Y5L2 63 aa2.14□□□□□ -2.07
RBFOX1-216ENST00000564850 BAZ2BQ9UIF8 2168 aaKnown RBP2.14□□□□□ -2.07
RBFOX1-216ENST00000564850 SPTBP11277 2137 aa2.14□□□□□ -2.07
RBFOX1-216ENST00000564850 MDC1Q14676 2089 aaKnown RBP2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 SLIT2O94813 1529 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 CLASP1Q7Z460 1538 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 SNRPGP15A8MWD9 76 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 C10orf142B7Z368 130 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 D6R8Y8 96 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 IFI27P40305 119 aaPredicted RBP2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 ATP5EP2Q5VTU8 51 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 MUSTN1Q8IVN3 82 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 GNG13Q9P2W3 67 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 TP53TG3Q9ULZ0 132 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 NRXN2Q9P2S2 1712 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 MED12Q93074 2177 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 PIK3C2BO00750 1634 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 LAMC1P11047 1609 aa2.13□□□□□ -2.07
RBFOX1-216ENST00000564850 CFAP43Q8NDM7 1665 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 PREX1Q8TCU6 1659 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 ITSN2Q9NZM3 1697 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 CR1P17927 2039 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 IGLV4-60A0A075B6I1 120 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 H3BVH4 76 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 PDE6GP18545 87 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 SPINT3P49223 89 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 COX7B2Q8TF08 81 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 R4GMQ9 66 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 LRRC37A3O60309 1634 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 SIP14410 1827 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 MYOM1P52179 1685 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 EHBP1L1Q8N3D4 1523 aa2.12□□□□□ -2.07
RBFOX1-216ENST00000564850 GLI2P10070 1586 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 CEP192Q8TEP8 1941 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 A0A0G2JQZ4 141 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 TRBV6-4A0A1B0GX49 114 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 JMJD7-PLA2G4BH0Y9G9 81 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 DNAL4O96015 105 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 PPYP01298 95 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 CCL3L1P16619 93 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 FAM74A4Q5TZK3 123 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 PROK2Q9HC23 129 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 UBE2D4Q9Y2X8 147 aa2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 NKTRP30414 1462 aaKnown RBP2.11□□□□□ -2.07
RBFOX1-216ENST00000564850 COL4A5P29400 1685 aa2.1□□□□□ -2.07
RBFOX1-216ENST00000564850 FXYD6-FXYD2A0A087WZ82 144 aa2.1□□□□□ -2.07
RBFOX1-216ENST00000564850 F8VRH5 84 aa2.1□□□□□ -2.07
RBFOX1-216ENST00000564850 IGLV3-1P01715 115 aa2.1□□□□□ -2.07
RBFOX1-216ENST00000564850 Q8N9L7 120 aa2.1□□□□□ -2.07
RBFOX1-216ENST00000564850 PPP1R1CQ8WVI7 109 aa2.1□□□□□ -2.07
RBFOX1-216ENST00000564850 FAM103A1Q9BTL3 118 aaKnown RBP2.1□□□□□ -2.07
RBFOX1-216ENST00000564850 PRR15LQ9BU68 103 aa2.1□□□□□ -2.07
RBFOX1-216ENST00000564850 FXYD6Q9H0Q3 95 aa2.1□□□□□ -2.07
RBFOX1-216ENST00000564850 PLCH1Q4KWH8 1693 aa2.09□□□□□ -2.07
RBFOX1-216ENST00000564850 SHROOM3Q8TF72 1996 aa2.09□□□□□ -2.07
RBFOX1-216ENST00000564850 IGKV1-17P01599 117 aa2.09□□□□□ -2.07
RBFOX1-216ENST00000564850 LINC01558Q9Y6Z2 57 aa2.09□□□□□ -2.07
RBFOX1-216ENST00000564850 ARFGEF1Q9Y6D6 1849 aa2.09□□□□□ -2.08
RBFOX1-216ENST00000564850 RALGAPBQ86X10 1494 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 DLEC1Q9Y238 1755 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 IGKV2D-24A0A075B6R9 120 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 TRBV6-5A0A0K0K1A5 114 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 ATXN8Q156A1 80 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 TPRXLQ17RH7 258 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 WFDC10AQ9H1F0 79 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 KLK9Q9UKQ9 250 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 CRYBG1Q9Y4K1 1723 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 ARFGEF3Q5TH69 2177 aa2.08□□□□□ -2.08
RBFOX1-216ENST00000564850 TSC2P49815 1807 aa2.07□□□□□ -2.08
RBFOX1-216ENST00000564850 TNRC6BQ9UPQ9 1833 aaKnown RBP2.07□□□□□ -2.08
RBFOX1-216ENST00000564850 MRC1P22897 1456 aa2.07□□□□□ -2.08
RBFOX1-216ENST00000564850 SPAG17Q6Q759 2223 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms