RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 TRBV10-2A0A0K0K1G8 114 aa11.18□□□□□ -0.62
GTF3C1-205ENST00000564747 Q8N2B8 174 aa11.18□□□□□ -0.62
GTF3C1-205ENST00000564747 C4orf3Q8WVX3 66 aa11.18□□□□□ -0.62
GTF3C1-205ENST00000564747 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
GTF3C1-205ENST00000564747 WNK1Q9H4A3 2382 aa11.18□□□□□ -0.62
GTF3C1-205ENST00000564747 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
GTF3C1-205ENST00000564747 BEAN1Q3B7T3 259 aa11.17□□□□□ -0.62
GTF3C1-205ENST00000564747 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
GTF3C1-205ENST00000564747 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
GTF3C1-205ENST00000564747 CDKN2A-AS1Q9UH64 79 aa11.17□□□□□ -0.62
GTF3C1-205ENST00000564747 GAGE5Q13069 117 aa11.17□□□□□ -0.62
GTF3C1-205ENST00000564747 GAGE6Q13070 117 aa11.17□□□□□ -0.62
GTF3C1-205ENST00000564747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-205ENST00000564747 CRLF1O75462 422 aa11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 INSP01308 110 aa11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 RPL13AP40429 203 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 MIAQ16674 131 aa11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 IGHV3OR16-12A0A075B7B8 117 aa11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 TRAV8-4A0A0B4J246 113 aa11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 DAND5Q8N907 189 aa11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 RS1O15537 224 aa11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 DNAJC30Q96LL9 226 aa11.16□□□□□ -0.62
GTF3C1-205ENST00000564747 NIPBLQ6KC79 2804 aaeCLIP11.15□□□□□ -0.62
GTF3C1-205ENST00000564747 NOTCH3Q9UM47 2321 aa11.15□□□□□ -0.62
GTF3C1-205ENST00000564747 LINC01600Q96MT4 127 aa11.15□□□□□ -0.62
GTF3C1-205ENST00000564747 SONP18583 2426 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-205ENST00000564747 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.63
GTF3C1-205ENST00000564747 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.63
GTF3C1-205ENST00000564747 COX6A2Q02221 97 aa11.15□□□□□ -0.63
GTF3C1-205ENST00000564747 ICOSQ9Y6W8 199 aa11.15□□□□□ -0.63
GTF3C1-205ENST00000564747 C2orf82Q6UX34 121 aa11.14□□□□□ -0.63
GTF3C1-205ENST00000564747 SS18L2Q9UHA2 77 aa11.14□□□□□ -0.63
GTF3C1-205ENST00000564747 TTC32Q5I0X7 151 aa11.14□□□□□ -0.63
GTF3C1-205ENST00000564747 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
GTF3C1-205ENST00000564747 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
GTF3C1-205ENST00000564747 COX6CP09669 75 aa11.13□□□□□ -0.63
GTF3C1-205ENST00000564747 B5MCH6 92 aa11.13□□□□□ -0.63
GTF3C1-205ENST00000564747 ODF3L2Q3SX64 289 aa11.13□□□□□ -0.63
GTF3C1-205ENST00000564747 C11orf44Q8N8P7 122 aa11.12□□□□□ -0.63
GTF3C1-205ENST00000564747 NDUFA7O95182 113 aa11.12□□□□□ -0.63
GTF3C1-205ENST00000564747 IFITM1P13164 125 aa11.12□□□□□ -0.63
GTF3C1-205ENST00000564747 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
GTF3C1-205ENST00000564747 UBR5O95071 2799 aaPredicted RBP11.12□□□□□ -0.63
GTF3C1-205ENST00000564747 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
GTF3C1-205ENST00000564747 C2CD3Q4AC94 2353 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 TRGV1A0A0A0MS02 117 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 H7C423 109 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 LINC00694P0DN24 101 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 TIRAPP58753 221 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 C15orf53Q8NAA6 179 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 Q6Q795 121 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 Q96MF0 132 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 IGLV5-45A0A087WSX0 123 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 STHQ8IWL8 128 aa11.11□□□□□ -0.63
GTF3C1-205ENST00000564747 H3BT86 120 aa11.1□□□□□ -0.63
GTF3C1-205ENST00000564747 ZNF625Q96I27 306 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-205ENST00000564747 SETD2Q9BYW2 2564 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-205ENST00000564747 A0A1W2PRX2 142 aa11.1□□□□□ -0.63
GTF3C1-205ENST00000564747 DEFB113Q30KQ7 82 aa11.1□□□□□ -0.63
GTF3C1-205ENST00000564747 LINC00242Q5T6M2 205 aa11.1□□□□□ -0.63
GTF3C1-205ENST00000564747 NDUFA1O15239 70 aa11.09□□□□□ -0.63
GTF3C1-205ENST00000564747 YAE1D1Q9NRH1 226 aa11.09□□□□□ -0.63
GTF3C1-205ENST00000564747 APCP25054 2843 aa11.09□□□□□ -0.63
GTF3C1-205ENST00000564747 A0A0U1RRA0 63 aa11.09□□□□□ -0.63
GTF3C1-205ENST00000564747 TIMM17BO60830 172 aa11.09□□□□□ -0.63
GTF3C1-205ENST00000564747 GAGE12JA6NER3 117 aa11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 GAGE7O76087 117 aa11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 GAGE12FP0CL80 117 aa11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 GAGE12GP0CL81 117 aa11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 GAGE12IP0CL82 117 aa11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 GAGE4Q13068 117 aa11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 Q6ZTI0 123 aa11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 BBC3Q96PG8 261 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 Q9H8V8 135 aa11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 NTM-AS1Q6ZSK4 140 aa11.08□□□□□ -0.64
GTF3C1-205ENST00000564747 TRAV13-1A0A0B4J241 112 aa11.07□□□□□ -0.64
GTF3C1-205ENST00000564747 JMJD1CQ15652 2540 aa11.07□□□□□ -0.64
GTF3C1-205ENST00000564747 LST1O00453 97 aa11.07□□□□□ -0.64
GTF3C1-205ENST00000564747 IL17DQ8TAD2 202 aa11.07□□□□□ -0.64
GTF3C1-205ENST00000564747 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
GTF3C1-205ENST00000564747 HERVK_113P63121 156 aa11.06□□□□□ -0.64
GTF3C1-205ENST00000564747 CITED2Q99967 270 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-205ENST00000564747 ITPR3Q14573 2671 aa11.06□□□□□ -0.64
GTF3C1-205ENST00000564747 CCDC179H3BU77 68 aa11.05□□□□□ -0.64
GTF3C1-205ENST00000564747 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-205ENST00000564747 CIRBPQ14011 172 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-205ENST00000564747 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
GTF3C1-205ENST00000564747 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-205ENST00000564747 SETXQ7Z333 2677 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-205ENST00000564747 K7EQD1 137 aa11.05□□□□□ -0.64
GTF3C1-205ENST00000564747 SMIM1B2RUZ4 78 aa11.05□□□□□ -0.64
GTF3C1-205ENST00000564747 CCDC168Q8NDH2 2452 aa11.04□□□□□ -0.64
GTF3C1-205ENST00000564747 MRPL23Q16540 153 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-205ENST00000564747 TRAV25A0A0B4J276 109 aa11.03□□□□□ -0.64
GTF3C1-205ENST00000564747 FAM240AA0A1B0GVK7 77 aa11.03□□□□□ -0.64
GTF3C1-205ENST00000564747 CCL24O00175 119 aa11.03□□□□□ -0.64
GTF3C1-205ENST00000564747 NOP10Q9NPE3 64 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-205ENST00000564747 KRTAP1-3Q8IUG1 177 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms