RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 PRR3P79522 188 aaKnown RBP6.48□□□□□ -1.37
SF3B3-204ENST00000563739 Q0VG73 95 aa6.48□□□□□ -1.37
SF3B3-204ENST00000563739 FAM74A4Q5TZK3 123 aa6.48□□□□□ -1.37
SF3B3-204ENST00000563739 SPANXN1Q5VSR9 72 aa6.48□□□□□ -1.37
SF3B3-204ENST00000563739 AP1S3Q96PC3 154 aa6.48□□□□□ -1.37
SF3B3-204ENST00000563739 GNB1LQ9BYB4 327 aa6.48□□□□□ -1.37
SF3B3-204ENST00000563739 A0A087WX48 190 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 TMEM238LA0A1B0GVL6 79 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 A8MWL6 223 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 CACNG7P62955 275 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 WDR73Q6P4I2 378 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 RASL11AQ6T310 242 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 LYZL1Q6UWQ5 148 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 NTM-AS1Q6ZSK4 140 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 NUP35Q8NFH5 326 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 GTSF1Q8WW33 167 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 CNFNQ9BYD5 112 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 GFRA4Q9GZZ7 299 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 NAT8BQ9UHF3 227 aa6.47□□□□□ -1.37
SF3B3-204ENST00000563739 TRBV6-8A0A0A6YYG3 113 aa6.46□□□□□ -1.38
SF3B3-204ENST00000563739 FAM231BA6NCW3 169 aa6.46□□□□□ -1.38
SF3B3-204ENST00000563739 F2Z2F3 143 aa6.46□□□□□ -1.38
SF3B3-204ENST00000563739 MT-ND6P03923 174 aa6.46□□□□□ -1.38
SF3B3-204ENST00000563739 AKR1D1P51857 326 aa6.46□□□□□ -1.38
SF3B3-204ENST00000563739 SSTP61278 116 aa6.46□□□□□ -1.38
SF3B3-204ENST00000563739 COA6Q5JTJ3 125 aaKnown RBP6.46□□□□□ -1.38
SF3B3-204ENST00000563739 CLPSL2Q6UWE3 100 aa6.46□□□□□ -1.38
SF3B3-204ENST00000563739 TMEM136Q6ZRR5 245 aa6.46□□□□□ -1.38
SF3B3-204ENST00000563739 HIGD1CA8MV81 97 aa6.45□□□□□ -1.38
SF3B3-204ENST00000563739 ZNF56Q15929 161 aa6.45□□□□□ -1.38
SF3B3-204ENST00000563739 ATP5L2Q7Z4Y8 100 aa6.45□□□□□ -1.38
SF3B3-204ENST00000563739 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
SF3B3-204ENST00000563739 NEXN-AS1Q8NBZ9 246 aa6.45□□□□□ -1.38
SF3B3-204ENST00000563739 RNF185Q96GF1 192 aa6.45□□□□□ -1.38
SF3B3-204ENST00000563739 IFITM10A6NMD0 228 aa6.44□□□□□ -1.38
SF3B3-204ENST00000563739 ANGP03950 147 aaKnown RBP6.44□□□□□ -1.38
SF3B3-204ENST00000563739 S100A8P05109 93 aa6.44□□□□□ -1.38
SF3B3-204ENST00000563739 SMIM17P0DL12 118 aa6.44□□□□□ -1.38
SF3B3-204ENST00000563739 FOXA3P55318 350 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-204ENST00000563739 SRSF9Q13242 221 aaKnown RBP eCLIP6.44□□□□□ -1.38
SF3B3-204ENST00000563739 MIAQ16674 131 aa6.44□□□□□ -1.38
SF3B3-204ENST00000563739 MRPL54Q6P161 138 aaKnown RBP6.44□□□□□ -1.38
SF3B3-204ENST00000563739 LINC00518Q8N0U6 118 aa6.44□□□□□ -1.38
SF3B3-204ENST00000563739 TRBV10-1A0A0K0K1A3 114 aa6.43□□□□□ -1.38
SF3B3-204ENST00000563739 A0A1B0GXF2 115 aa6.43□□□□□ -1.38
SF3B3-204ENST00000563739 CRPP02741 224 aa6.43□□□□□ -1.38
SF3B3-204ENST00000563739 NTF3P20783 257 aa6.43□□□□□ -1.38
SF3B3-204ENST00000563739 RAB4BP61018 213 aa6.43□□□□□ -1.38
SF3B3-204ENST00000563739 RBX1P62877 108 aa6.43□□□□□ -1.38
SF3B3-204ENST00000563739 TWIST1Q15672 202 aa6.43□□□□□ -1.38
SF3B3-204ENST00000563739 PGLYRP4Q96LB8 373 aa6.43□□□□□ -1.38
SF3B3-204ENST00000563739 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
SF3B3-204ENST00000563739 TRBV7-3A0A075B6L6 115 aa6.42□□□□□ -1.38
SF3B3-204ENST00000563739 APCSP02743 223 aa6.42□□□□□ -1.38
SF3B3-204ENST00000563739 MGPP08493 103 aa6.42□□□□□ -1.38
SF3B3-204ENST00000563739 C15orf56Q8N910 161 aa6.42□□□□□ -1.38
SF3B3-204ENST00000563739 BORCS7Q96B45 105 aa6.42□□□□□ -1.38
SF3B3-204ENST00000563739 DPH3P1Q9H4G8 78 aa6.42□□□□□ -1.38
SF3B3-204ENST00000563739 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
SF3B3-204ENST00000563739 A0A1B0GUT8 65 aa6.41□□□□□ -1.38
SF3B3-204ENST00000563739 F5H697 171 aa6.41□□□□□ -1.38
SF3B3-204ENST00000563739 S100A2P29034 98 aa6.41□□□□□ -1.38
SF3B3-204ENST00000563739 HBBP68871 147 aa6.41□□□□□ -1.38
SF3B3-204ENST00000563739 SUMO4Q6EEV6 95 aa6.41□□□□□ -1.38
SF3B3-204ENST00000563739 LINC00269Q8N2A0 174 aa6.41□□□□□ -1.38
SF3B3-204ENST00000563739 C20orf203Q8NBC4 194 aa6.41□□□□□ -1.38
SF3B3-204ENST00000563739 IGLV10-54A0A075B6I4 117 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 A0A1B0GW15 77 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 TMEM262E9PQX1 116 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 SMIM6P0DI80 62 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 CAMPP49913 170 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 RPL36AP83881 106 aaKnown RBP6.4□□□□□ -1.38
SF3B3-204ENST00000563739 RIGQ13278 110 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 KIAA1644Q3SXP7 199 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 PDZD11Q5EBL8 140 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 GATD1Q8NB37 220 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 PRSS3P2Q8NHM4 247 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 RPL36ALQ969Q0 106 aaKnown RBP6.4□□□□□ -1.38
SF3B3-204ENST00000563739 HIST1H2BLQ99880 126 aa6.4□□□□□ -1.38
SF3B3-204ENST00000563739 hDV102S1A0JD36 115 aa6.39□□□□□ -1.39
SF3B3-204ENST00000563739 H7C1H1 209 aa6.39□□□□□ -1.39
SF3B3-204ENST00000563739 M0QY20 66 aa6.39□□□□□ -1.39
SF3B3-204ENST00000563739 ESDP10768 282 aa6.39□□□□□ -1.39
SF3B3-204ENST00000563739 FABP4P15090 132 aa6.39□□□□□ -1.39
SF3B3-204ENST00000563739 GAGE6Q13070 117 aa6.39□□□□□ -1.39
SF3B3-204ENST00000563739 SMIM15Q7Z3B0 74 aa6.39□□□□□ -1.39
SF3B3-204ENST00000563739 C12orf57Q99622 126 aa6.39□□□□□ -1.39
SF3B3-204ENST00000563739 IGLV4-60A0A075B6I1 120 aa6.38□□□□□ -1.39
SF3B3-204ENST00000563739 A0A096LNI7 61 aa6.38□□□□□ -1.39
SF3B3-204ENST00000563739 NUPR1O60356 82 aa6.38□□□□□ -1.39
SF3B3-204ENST00000563739 COX6A2Q02221 97 aa6.38□□□□□ -1.39
SF3B3-204ENST00000563739 SPINK6Q6UWN8 80 aa6.38□□□□□ -1.39
SF3B3-204ENST00000563739 OR10D4PQ8NGN7 298 aa6.38□□□□□ -1.39
SF3B3-204ENST00000563739 CHCHD5Q9BSY4 110 aa6.38□□□□□ -1.39
SF3B3-204ENST00000563739 TMEM191AQ9H0A3 160 aa6.38□□□□□ -1.39
SF3B3-204ENST00000563739 TRAV26-2A0A0B4J265 109 aa6.37□□□□□ -1.39
SF3B3-204ENST00000563739 SERF1AO75920 110 aa6.37□□□□□ -1.39
SF3B3-204ENST00000563739 LINC00310P59036 64 aa6.37□□□□□ -1.39
SF3B3-204ENST00000563739 REG3AQ06141 175 aa6.37□□□□□ -1.39
SF3B3-204ENST00000563739 BAGE3Q86Y29 109 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms