RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 RTL8CO15255 209 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 G0S2P27469 103 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 REG3AQ06141 175 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 NFE4Q86UQ8 179 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 ZNF664Q8N3J9 261 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 OR5A1Q8NGJ0 315 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 URB1-AS1Q96HZ7 61 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 TIMM21Q9BVV7 248 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 CDC42SE2Q9NRR3 84 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 PRR34Q9NV39 138 aa6.89□□□□□ -1.31
LRRC28-221ENST00000561276 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
LRRC28-221ENST00000561276 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-221ENST00000561276 CRPP02741 224 aa6.88□□□□□ -1.31
LRRC28-221ENST00000561276 RAB5BP61020 215 aa6.88□□□□□ -1.31
LRRC28-221ENST00000561276 C2orf66Q6UXQ4 117 aa6.88□□□□□ -1.31
LRRC28-221ENST00000561276 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
LRRC28-221ENST00000561276 AP5S1Q9NUS5 200 aa6.88□□□□□ -1.31
LRRC28-221ENST00000561276 KMT2CQ8NEZ4 4911 aaKnown RBP6.88□□□□□ -1.31
LRRC28-221ENST00000561276 IGKV3OR2-268A0A0C4DH90 116 aa6.87□□□□□ -1.31
LRRC28-221ENST00000561276 MIAQ16674 131 aa6.87□□□□□ -1.31
LRRC28-221ENST00000561276 Q6ZRN7 208 aaPredicted RBP6.87□□□□□ -1.31
LRRC28-221ENST00000561276 FAM104AQ969W3 186 aa6.87□□□□□ -1.31
LRRC28-221ENST00000561276 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
LRRC28-221ENST00000561276 SPANXA1Q9NS26 97 aa6.87□□□□□ -1.31
LRRC28-221ENST00000561276 CYSLTR1Q9Y271 337 aa6.87□□□□□ -1.31
LRRC28-221ENST00000561276 PYGO1Q9Y3Y4 419 aa6.87□□□□□ -1.31
LRRC28-221ENST00000561276 SACSQ9NZJ4 4579 aa6.86□□□□□ -1.31
LRRC28-221ENST00000561276 IGLV10-54A0A075B6I4 117 aa6.86□□□□□ -1.31
LRRC28-221ENST00000561276 IGKV2D-24A0A075B6R9 120 aa6.86□□□□□ -1.31
LRRC28-221ENST00000561276 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
LRRC28-221ENST00000561276 BAGE3Q86Y29 109 aa6.86□□□□□ -1.31
LRRC28-221ENST00000561276 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
LRRC28-221ENST00000561276 RMI2Q96E14 147 aa6.86□□□□□ -1.31
LRRC28-221ENST00000561276 C1orf43Q9BWL3 253 aa6.86□□□□□ -1.31
LRRC28-221ENST00000561276 TM2D2Q9BX73 214 aa6.86□□□□□ -1.31
LRRC28-221ENST00000561276 COX11Q9Y6N1 276 aa6.86□□□□□ -1.31
LRRC28-221ENST00000561276 TRAV8-4A0A0B4J246 113 aa6.85□□□□□ -1.31
LRRC28-221ENST00000561276 PRSS29PA6NIE9 313 aa6.85□□□□□ -1.31
LRRC28-221ENST00000561276 IGIPA6NJ69 53 aa6.85□□□□□ -1.31
LRRC28-221ENST00000561276 PSCAO43653 123 aa6.85□□□□□ -1.31
LRRC28-221ENST00000561276 MRPS36P82909 103 aaKnown RBP6.85□□□□□ -1.31
LRRC28-221ENST00000561276 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
LRRC28-221ENST00000561276 IGLV4-3A0A075B6K6 122 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 LINC00959A0A1B0GUT2 108 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 LINC01549A6NIU2 74 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST1H2BKO60814 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST1H2BJP06899 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST1H2BOP23527 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST1H2BBP33778 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST1H2BDP58876 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST1H2BCP62807 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST2H2BEQ16778 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.84□□□□□ -1.31
LRRC28-221ENST00000561276 LINC00336Q6ZUF6 198 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 Q6ZUT4 128 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 ERASQ7Z444 233 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 MAPKAPK5-AS1Q8N8E1 139 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST1H2BHQ93079 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 SCGB3A1Q96QR1 104 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST1H2BNQ99877 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 HIST1H2BMQ99879 126 aa6.84□□□□□ -1.31
LRRC28-221ENST00000561276 KMT2AQ03164 3969 aa6.84□□□□□ -1.32
LRRC28-221ENST00000561276 A0A096LNJ9 63 aa6.83□□□□□ -1.32
LRRC28-221ENST00000561276 SERF1AO75920 110 aa6.83□□□□□ -1.32
LRRC28-221ENST00000561276 SS18Q15532 418 aa6.83□□□□□ -1.32
LRRC28-221ENST00000561276 KRTAP26-1Q6PEX3 210 aa6.83□□□□□ -1.32
LRRC28-221ENST00000561276 TMEM141Q96I45 108 aa6.83□□□□□ -1.32
LRRC28-221ENST00000561276 TRAV13-1A0A0B4J241 112 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 C1orf196B1AJZ1 125 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 CCL25O15444 150 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 NUPR1O60356 82 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 HSBP1O75506 76 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 HBDP02042 147 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 NPSP0C0P6 89 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 FAM19A2Q8N3H0 131 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
LRRC28-221ENST00000561276 TIMM17AQ99595 171 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 VCX2Q9H322 139 aa6.82□□□□□ -1.32
LRRC28-221ENST00000561276 LRCOL1A6NCL2 159 aa6.81□□□□□ -1.32
LRRC28-221ENST00000561276 GAGE12HA6NDE8 117 aa6.81□□□□□ -1.32
LRRC28-221ENST00000561276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-221ENST00000561276 LINC00310P59036 64 aa6.81□□□□□ -1.32
LRRC28-221ENST00000561276 PAPPA-AS1Q5QFB9 102 aa6.81□□□□□ -1.32
LRRC28-221ENST00000561276 ZC2HC1BQ5TFG8 222 aa6.81□□□□□ -1.32
LRRC28-221ENST00000561276 Q6ZN92 141 aa6.81□□□□□ -1.32
LRRC28-221ENST00000561276 TEX43Q6ZNM6 134 aa6.81□□□□□ -1.32
LRRC28-221ENST00000561276 BAALCQ8WXS3 180 aa6.81□□□□□ -1.32
LRRC28-221ENST00000561276 AMELXQ99217 191 aa6.81□□□□□ -1.32
LRRC28-221ENST00000561276 A0A087WTM6 91 aa6.8□□□□□ -1.32
LRRC28-221ENST00000561276 IFITM10A6NMD0 228 aa6.8□□□□□ -1.32
LRRC28-221ENST00000561276 XCL1P47992 114 aa6.8□□□□□ -1.32
LRRC28-221ENST00000561276 PDZD11Q5EBL8 140 aa6.8□□□□□ -1.32
LRRC28-221ENST00000561276 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
LRRC28-221ENST00000561276 RYR2Q92736 4967 aa6.79□□□□□ -1.32
LRRC28-221ENST00000561276 LECT2O14960 151 aa6.79□□□□□ -1.32
LRRC28-221ENST00000561276 NDUFA6P56556 154 aa6.79□□□□□ -1.32
LRRC28-221ENST00000561276 CD164L2Q6UWJ8 174 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms