RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532		A0A0G2JND7	137 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	ZNF815P	A8K554	130 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532		B4DSR2	109 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532		F8VRH5	84 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	CHKB-CPT1B	H3BT56	60 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532		H7BZZ5	65 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	HMGN2	P05204	90 aa	Known RBP	0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	RNASE3	P12724	160 aa	Known RBP	0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	CCL3L1	P16619	93 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	S100A3	P33764	101 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	SPAG11B	Q08648	103 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	ETDB	Q3ZM63	59 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	CSAG1	Q6PB30	78 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	SPAG11A	Q6PDA7	123 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	UNQ6190/PRO20217	Q6UXQ8	127 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	BAGE3	Q86Y29	109 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532		Q8N6K4	173 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	C18orf32	Q8TCD1	76 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	ODF3	Q96PU9	254 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	PRO1933	Q9H354	126 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	CDC42SE2	Q9NRR3	84 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	SPCS1	Q9Y6A9	102 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	KNTC1	P50748	2209 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	TECTA	O75443	2155 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	DOCK11	Q5JSL3	2073 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	PTPRF	P10586	1907 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	TCHH	Q07283	1943 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	PLXNA2	O75051	1894 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	CCDC88A	Q3V6T2	1871 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	PPL	O60437	1756 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	COL24A1	Q17RW2	1714 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	BCORL1	Q5H9F3	1711 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	NWD2	Q9ULI1	1742 aa		0.5	□□□□□ -2.33
SLTM-223	ENST00000560532	ZNF142	P52746	1687 aa	Predicted RBP	0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	MAP3K4	Q9Y6R4	1608 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	NAV3	Q8IVL0	2385 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	CUX1	P39880	1505 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	GOLGA3	Q08378	1498 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	CASP8AP2	Q9UKL3	1982 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	MYH8	P13535	1937 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	TRAV22	A0A0B4J277	110 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532		A0A1B0GWA3	101 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	HMGN4	O00479	90 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	PPP1R17	O96001	155 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	IGLV3-1	P01715	115 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	NMB	P08949	121 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	SMIM13	P0DJ93	91 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	IGLC2	P0DOY2	106 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	IGLC3	P0DOY3	106 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	PRB4	P10163	310 aa	Predicted RBP	0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	DEFA5	Q01523	94 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	PLGLA	Q15195	96 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	NMS	Q5H8A3	153 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	DEFB121	Q5J5C9	76 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	BVES-AS1	Q5T3Y7	98 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	C10orf113	Q5VZT2	155 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	SFTA2	Q6UW10	78 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532		Q6ZQY7	126 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	SMIM5	Q71RC9	77 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	BAGE2	Q86Y30	109 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	C20orf197	Q8N268	126 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	WFDC6	Q9BQY6	131 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	C20orf78	Q9BR46	151 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	WFDC10A	Q9H1F0	79 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	NDUFA4L2	Q9NRX3	87 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	TMEM14B	Q9NUH8	114 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	LINC01558	Q9Y6Z2	57 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	PHIP	Q8WWQ0	1821 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	SUPT6H	Q7KZ85	1726 aa	Known RBP	0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	ESPL1	Q14674	2120 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	CFAP74	Q9C0B2	1584 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	LAMC3	Q9Y6N6	1575 aa		0.49	□□□□□ -2.33
SLTM-223	ENST00000560532	DUOX2	Q9NRD8	1548 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	EML5	Q05BV3	1969 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	EXPH5	Q8NEV8	1989 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	PTPRM	P28827	1452 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	NKTR	P30414	1462 aa	Known RBP	0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	EDC4	Q6P2E9	1401 aa	Known RBP	0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	MGAM	O43451	1857 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	ANK1	P16157	1881 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	KIF20B	Q96Q89	1820 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	CAD	P27708	2225 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	MED13L	Q71F56	2210 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	STRC	Q7RTU9	1775 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	CASZ1	Q86V15	1759 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	ABCA3	Q99758	1704 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	TRBV30	A0A0K0K1B3	111 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	MYMX	A0A1B0GTQ4	84 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	CEBPZOS	A8MTT3	80 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532		D6R8Y8	96 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532		M0R135	149 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	CFD	P00746	253 aa	Predicted RBP	0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	CCL18	P55774	89 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	FXYD4	P59646	89 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	RPL37A	P61513	92 aa	Known RBP	0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	FXYD3	Q14802	87 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	TDRG1	Q3Y452	100 aa		0.48	□□□□□ -2.33
SLTM-223	ENST00000560532	CFAP126	Q5VTH2	177 aa		0.48	□□□□□ -2.33

Retrieved 100 of 20,778 RNA–protein pairs in 81 ms