RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 KDM5AP29375 1690 aaKnown RBP1.22□□□□□ -2.21
SPG11-218ENST00000559754 CLTCQ00610 1675 aaKnown RBP1.22□□□□□ -2.21
SPG11-218ENST00000559754 COL4A6Q14031 1691 aa1.22□□□□□ -2.21
SPG11-218ENST00000559754 KIF21AQ7Z4S6 1674 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 TRAV22A0A0B4J277 110 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 CHKB-CPT1BH3BT56 60 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 HMGN4O00479 90 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 COX6CP09669 75 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 ASIPP42127 132 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 BAGE3Q86Y29 109 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 AMELXQ99217 191 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 V9GYH0 126 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 FBN3Q75N90 2809 aa1.21□□□□□ -2.22
SPG11-218ENST00000559754 RGPD3A6NKT7 1758 aaPredicted RBP1.21□□□□□ -2.22
SPG11-218ENST00000559754 MON2Q7Z3U7 1717 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 EHBP1L1Q8N3D4 1523 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 PLEKHH2Q8IVE3 1493 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 K7EIL1 84 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 SFT2D2O95562 160 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 IGLC1P0CG04 106 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 RPL37P61927 97 aaKnown RBP1.2□□□□□ -2.22
SPG11-218ENST00000559754 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 C9orf62Q8N4C0 152 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 Q8N6K4 173 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 PPLO60437 1756 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 ABCA1O95477 2261 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 TRANK1O15050 2925 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 PDCD11Q14690 1871 aaKnown RBP1.2□□□□□ -2.22
SPG11-218ENST00000559754 SCN7AQ01118 1682 aa1.2□□□□□ -2.22
SPG11-218ENST00000559754 MED14O60244 1454 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 MLH3Q9UHC1 1453 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 TRGV1A0A0A0MS02 117 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 TRBV7-7A0A0K0K1E9 115 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 LY6G6CO95867 125 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 ACYP2P14621 99 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 FXYD6P3P58550 94 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 VMO1Q7Z5L0 202 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 TRGV9Q99603 122 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 FAIMQ9NVQ4 179 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 ZNF236Q9UL36 1845 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 HMGXB3Q12766 1538 aa1.19□□□□□ -2.22
SPG11-218ENST00000559754 CDK13Q14004 1512 aaKnown RBP1.19□□□□□ -2.22
SPG11-218ENST00000559754 STAB1Q9NY15 2570 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 BPTFQ12830 3046 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 TRAV1-2A0A0B4J238 106 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 F2Z2F3 143 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 M0R135 149 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 GYPAP02724 150 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 TMEM170BQ5T4T1 132 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 SERP2Q8N6R1 65 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 SMIM11BQ8TCY0 68 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 BPESC1Q9GZL8 116 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 COL6A6A6NMZ7 2263 aa1.18□□□□□ -2.22
SPG11-218ENST00000559754 ZMYM4Q5VZL5 1548 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 IGLC7A0M8Q6 106 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 TMEM14DPA8MWL7 114 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 F8VRH5 84 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 UQCR11O14957 56 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 CACFD1Q9UGQ2 172 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 F5P12259 2224 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 LRRC37A2A6NM11 1700 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 NUP188Q5SRE5 1749 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 FANCAO15360 1455 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 BTAF1O14981 1849 aa1.17□□□□□ -2.22
SPG11-218ENST00000559754 ROS1P08922 2347 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 EPRSP07814 1512 aaKnown RBP1.16□□□□□ -2.22
SPG11-218ENST00000559754 RAPGEF6Q8TEU7 1601 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 GVQW2A0A096LPI5 108 aaPredicted RBP1.16□□□□□ -2.22
SPG11-218ENST00000559754 APOC3P02656 99 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 TRAPPC2P0DI81 140 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 TRAPPC2BP0DI82 140 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 SPINT3P49223 89 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 BAGE2Q86Y30 109 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 NPVFQ9HCQ7 196 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 LINC01558Q9Y6Z2 57 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 ZDBF2Q9HCK1 2354 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 SSC5DA1L4H1 1573 aa1.16□□□□□ -2.22
SPG11-218ENST00000559754 MUC5BQ9HC84 5762 aaPredicted RBP1.16□□□□□ -2.22
SPG11-218ENST00000559754 CTXND1A0A1B0GTU2 59 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 SYS1-DBNDD2H3BUS1 97 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 H7BZZ5 65 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 ZNF137PP52743 207 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 COX17Q14061 63 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 SMIM4Q8WVI0 70 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 NXT2Q9NPJ8 142 aaKnown RBP1.15□□□□□ -2.23
SPG11-218ENST00000559754 CCDC18Q5T9S5 1454 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 UNC13BO14795 1591 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 SYNE2Q8WXH0 6885 aaKnown RBP1.15□□□□□ -2.23
SPG11-218ENST00000559754 MYO7BQ6PIF6 2116 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 MYO3AQ8NEV4 1616 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 CEP162Q5TB80 1403 aa1.15□□□□□ -2.23
SPG11-218ENST00000559754 SAA2P0DJI9 122 aaPredicted RBP1.14□□□□□ -2.23
SPG11-218ENST00000559754 FAUP35544 74 aaKnown RBP1.14□□□□□ -2.23
SPG11-218ENST00000559754 KRTAP10-4P60372 401 aaPredicted RBP1.14□□□□□ -2.23
SPG11-218ENST00000559754 ARL2-SNX15V9GYD0 113 aa1.14□□□□□ -2.23
SPG11-218ENST00000559754 MYH4Q9Y623 1939 aa1.14□□□□□ -2.23
SPG11-218ENST00000559754 WNK3Q9BYP7 1800 aa1.14□□□□□ -2.23
SPG11-218ENST00000559754 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
SPG11-218ENST00000559754 KNTC1P50748 2209 aa1.13□□□□□ -2.23
SPG11-218ENST00000559754 UBR1Q8IWV7 1749 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms