RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 AP4S1Q9Y587 144 aa0.85□□□□□ -2.27
CTDSPL2-207ENST00000559738 ZNF609O15014 1411 aa0.84□□□□□ -2.27
CTDSPL2-207ENST00000559738 LOC285095A0A1B0GVY8 99 aa0.84□□□□□ -2.27
CTDSPL2-207ENST00000559738 IGLC7A0M8Q6 106 aa0.84□□□□□ -2.27
CTDSPL2-207ENST00000559738 F8VRH5 84 aa0.84□□□□□ -2.27
CTDSPL2-207ENST00000559738 TMEM170BQ5T4T1 132 aa0.84□□□□□ -2.27
CTDSPL2-207ENST00000559738 Q5VV11 94 aa0.84□□□□□ -2.27
CTDSPL2-207ENST00000559738 BAGE2Q86Y30 109 aa0.84□□□□□ -2.27
CTDSPL2-207ENST00000559738 FAM167A-AS1Q96KT0 104 aa0.84□□□□□ -2.27
CTDSPL2-207ENST00000559738 FYCO1Q9BQS8 1478 aa0.84□□□□□ -2.28
CTDSPL2-207ENST00000559738 WNK3Q9BYP7 1800 aa0.83□□□□□ -2.28
CTDSPL2-207ENST00000559738 TRAV22A0A0B4J277 110 aa0.83□□□□□ -2.28
CTDSPL2-207ENST00000559738 G3V318 75 aa0.83□□□□□ -2.28
CTDSPL2-207ENST00000559738 MT-ATP8P03928 68 aa0.83□□□□□ -2.28
CTDSPL2-207ENST00000559738 PKIAP61925 76 aa0.83□□□□□ -2.28
CTDSPL2-207ENST00000559738 SEC11AP67812 179 aa0.83□□□□□ -2.28
CTDSPL2-207ENST00000559738 SMIM4Q8WVI0 70 aa0.83□□□□□ -2.28
CTDSPL2-207ENST00000559738 PMCHL2Q9BQD1 86 aa0.83□□□□□ -2.28
CTDSPL2-207ENST00000559738 PRO1854Q9UHT4 67 aa0.83□□□□□ -2.28
CTDSPL2-207ENST00000559738 APOC3P02656 99 aa0.82□□□□□ -2.28
CTDSPL2-207ENST00000559738 TRAPPC2P0DI81 140 aa0.82□□□□□ -2.28
CTDSPL2-207ENST00000559738 TRAPPC2BP0DI82 140 aa0.82□□□□□ -2.28
CTDSPL2-207ENST00000559738 AMELXQ99217 191 aa0.82□□□□□ -2.28
CTDSPL2-207ENST00000559738 FAM103A1Q9BTL3 118 aaKnown RBP0.82□□□□□ -2.28
CTDSPL2-207ENST00000559738 CDC42SE2Q9NRR3 84 aa0.82□□□□□ -2.28
CTDSPL2-207ENST00000559738 EHBP1L1Q8N3D4 1523 aa0.82□□□□□ -2.28
CTDSPL2-207ENST00000559738 CADP27708 2225 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 GAPVD1Q14C86 1478 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 PLXNB2O15031 1838 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 UQCR11O14957 56 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 SFT2D2O95562 160 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 NMBP08949 121 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 COX6CP09669 75 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 UBE2D3P61077 147 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 UBE2D2P62837 147 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 UBA52P62987 128 aaKnown RBP0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 COX17Q14061 63 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 COL5A1-AS1Q5SY13 56 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 DPY30Q9C005 99 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 ARL2-SNX15V9GYD0 113 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 PDCD11Q14690 1871 aaKnown RBP0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 LRRC37A2A6NM11 1700 aa0.81□□□□□ -2.28
CTDSPL2-207ENST00000559738 KDM3BQ7LBC6 1761 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 DIP2CQ9Y2E4 1556 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 LINC00032P0C843 101 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 UBE2DNLQ8IWF7 75 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 FAM223AQ8IWN6 122 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 VAMP8Q9BV40 100 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 SNHG12Q9BXW3 62 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 C10orf95Q9H7T3 257 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 NXT2Q9NPJ8 142 aaKnown RBP0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 FAIMQ9NVQ4 179 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 LINC01558Q9Y6Z2 57 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 NUP188Q5SRE5 1749 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 MYO7BQ6PIF6 2116 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 TEX14Q8IWB6 1497 aa0.8□□□□□ -2.28
CTDSPL2-207ENST00000559738 SPINK7P58062 85 aa0.79□□□□□ -2.28
CTDSPL2-207ENST00000559738 HAMPP81172 84 aa0.79□□□□□ -2.28
CTDSPL2-207ENST00000559738 PROK2Q9HC23 129 aa0.79□□□□□ -2.28
CTDSPL2-207ENST00000559738 ANKRD36BQ8N2N9 1353 aa0.79□□□□□ -2.28
CTDSPL2-207ENST00000559738 HMGXB3Q12766 1538 aa0.79□□□□□ -2.28
CTDSPL2-207ENST00000559738 UNC13BO14795 1591 aa0.79□□□□□ -2.28
CTDSPL2-207ENST00000559738 TTC37Q6PGP7 1564 aa0.79□□□□□ -2.28
CTDSPL2-207ENST00000559738 BAZ1AQ9NRL2 1556 aaPredicted RBP0.79□□□□□ -2.28
CTDSPL2-207ENST00000559738 MARF1Q9Y4F3 1742 aaKnown RBP0.78□□□□□ -2.28
CTDSPL2-207ENST00000559738 M0R3E3 92 aa0.78□□□□□ -2.28
CTDSPL2-207ENST00000559738 A0A0G2JND7 137 aa0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 ATOX1O00244 68 aa0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 MGPP08493 103 aa0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 IGLC1P0CG04 106 aa0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 PLEKHH2Q8IVE3 1493 aa0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 MLH3Q9UHC1 1453 aa0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 PRDM15P57071 1507 aaPredicted RBP0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 RAPGEF6Q8TEU7 1601 aa0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 CLTCQ00610 1675 aaKnown RBP0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 COL4A6Q14031 1691 aa0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 TENM3Q9P273 2699 aa0.77□□□□□ -2.29
CTDSPL2-207ENST00000559738 CACNA1CQ13936 2221 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 ASXL3Q9C0F0 2248 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 MON2Q7Z3U7 1717 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 LRP6O75581 1613 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 MAGI1Q96QZ7 1491 aaPredicted RBP0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 FAM223BA6NKX1 122 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 ZNF815PA8K554 130 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 PIN1P1O15428 100 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 NDUFC1O43677 76 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 SSBP3-AS1Q7Z2R9 100 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 Q9H521 79 aa0.76□□□□□ -2.29
CTDSPL2-207ENST00000559738 RGPD4Q7Z3J3 1758 aa0.75□□□□□ -2.29
CTDSPL2-207ENST00000559738 FAUP35544 74 aaKnown RBP0.75□□□□□ -2.29
CTDSPL2-207ENST00000559738 Q6JHZ5 121 aa0.75□□□□□ -2.29
CTDSPL2-207ENST00000559738 LINC00472Q9H8W2 130 aa0.75□□□□□ -2.29
CTDSPL2-207ENST00000559738 CACFD1Q9UGQ2 172 aa0.75□□□□□ -2.29
CTDSPL2-207ENST00000559738 ERCC6L2Q5T890 1561 aa0.74□□□□□ -2.29
CTDSPL2-207ENST00000559738 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
CTDSPL2-207ENST00000559738 RAPGEF2Q9Y4G8 1499 aa0.74□□□□□ -2.29
CTDSPL2-207ENST00000559738 NSD3Q9BZ95 1437 aa0.74□□□□□ -2.29
CTDSPL2-207ENST00000559738 A0A1B0GWA3 101 aa0.74□□□□□ -2.29
CTDSPL2-207ENST00000559738 ASIPP42127 132 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms