RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 PET117Q6UWS5 81 aa10.17□□□□□ -0.78
VPS18-202ENST00000558474 BAALCQ8WXS3 180 aa10.17□□□□□ -0.78
VPS18-202ENST00000558474 AMELXQ99217 191 aa10.17□□□□□ -0.78
VPS18-202ENST00000558474 VCX2Q9H322 139 aa10.17□□□□□ -0.78
VPS18-202ENST00000558474 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 PRSS1P07477 247 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 C3orf79P0CE67 100 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 DNAH10OSP0CZ25 163 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 PMVKQ15126 192 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 MPV17L2Q567V2 206 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 ZFAND6Q6FIF0 208 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 LINC00173Q6ZV60 143 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 OR10D4PQ8NGN7 298 aa10.16□□□□□ -0.78
VPS18-202ENST00000558474 SIVA1O15304 175 aa10.15□□□□□ -0.78
VPS18-202ENST00000558474 WFDC10BQ8IUB3 73 aa10.15□□□□□ -0.78
VPS18-202ENST00000558474 FAM104AQ969W3 186 aa10.15□□□□□ -0.78
VPS18-202ENST00000558474 C2orf88Q9BSF0 95 aa10.15□□□□□ -0.78
VPS18-202ENST00000558474 IGLV4-60A0A075B6I1 120 aa10.14□□□□□ -0.79
VPS18-202ENST00000558474 CCL25O15444 150 aa10.14□□□□□ -0.79
VPS18-202ENST00000558474 KRTDAPP60985 99 aa10.14□□□□□ -0.79
VPS18-202ENST00000558474 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
VPS18-202ENST00000558474 LGALS9CQ6DKI2 356 aa10.14□□□□□ -0.79
VPS18-202ENST00000558474 Q6ZUT4 128 aa10.14□□□□□ -0.79
VPS18-202ENST00000558474 UBE2DNLQ8IWF7 75 aa10.14□□□□□ -0.79
VPS18-202ENST00000558474 CST9LQ9H4G1 147 aa10.14□□□□□ -0.79
VPS18-202ENST00000558474 CSMD3Q7Z407 3707 aa10.14□□□□□ -0.79
VPS18-202ENST00000558474 LOC105371267A0A1B0GV96 52 aa10.13□□□□□ -0.79
VPS18-202ENST00000558474 C20orf202A1L168 122 aa10.13□□□□□ -0.79
VPS18-202ENST00000558474 Q8N976 141 aa10.13□□□□□ -0.79
VPS18-202ENST00000558474 OPRPNQ99935 248 aaPredicted RBP10.13□□□□□ -0.79
VPS18-202ENST00000558474 TRAV9-2A0A087WT02 112 aa10.12□□□□□ -0.79
VPS18-202ENST00000558474 PRSS29PA6NIE9 313 aa10.12□□□□□ -0.79
VPS18-202ENST00000558474 LINC01545Q5VT33 79 aa10.12□□□□□ -0.79
VPS18-202ENST00000558474 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
VPS18-202ENST00000558474 C10orf126Q8N4M7 172 aa10.12□□□□□ -0.79
VPS18-202ENST00000558474 Q9H8V8 135 aa10.12□□□□□ -0.79
VPS18-202ENST00000558474 TGP01266 2768 aa10.11□□□□□ -0.79
VPS18-202ENST00000558474 ANGP03950 147 aaKnown RBP10.11□□□□□ -0.79
VPS18-202ENST00000558474 SEC11AP67812 179 aa10.11□□□□□ -0.79
VPS18-202ENST00000558474 ODF1Q14990 250 aa10.11□□□□□ -0.79
VPS18-202ENST00000558474 PRR34Q9NV39 138 aa10.11□□□□□ -0.79
VPS18-202ENST00000558474 F8VRH5 84 aa10.1□□□□□ -0.79
VPS18-202ENST00000558474 JOSD1Q15040 202 aaPredicted RBP10.1□□□□□ -0.79
VPS18-202ENST00000558474 CHTOPQ9Y3Y2 248 aaKnown RBP10.1□□□□□ -0.79
VPS18-202ENST00000558474 IGHV3-30P01768 117 aa10.09□□□□□ -0.79
VPS18-202ENST00000558474 IGHV3-33P01772 117 aa10.09□□□□□ -0.79
VPS18-202ENST00000558474 IGHV3-30-3P0DP02 117 aa10.09□□□□□ -0.79
VPS18-202ENST00000558474 IGHV3-30-5P0DP03 117 aa10.09□□□□□ -0.79
VPS18-202ENST00000558474 UBE2D1P51668 147 aa10.09□□□□□ -0.79
VPS18-202ENST00000558474 REG3AQ06141 175 aa10.09□□□□□ -0.79
VPS18-202ENST00000558474 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
VPS18-202ENST00000558474 H0Y8G0 127 aa10.08□□□□□ -0.8
VPS18-202ENST00000558474 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
VPS18-202ENST00000558474 PLNP26678 52 aa10.08□□□□□ -0.8
VPS18-202ENST00000558474 LINC00269Q8N2A0 174 aa10.08□□□□□ -0.8
VPS18-202ENST00000558474 KLK12Q9UKR0 248 aa10.08□□□□□ -0.8
VPS18-202ENST00000558474 LINC00959A0A1B0GUT2 108 aa10.07□□□□□ -0.8
VPS18-202ENST00000558474 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
VPS18-202ENST00000558474 IBA57-AS1B1ANH7 110 aa10.07□□□□□ -0.8
VPS18-202ENST00000558474 CRPP02741 224 aa10.07□□□□□ -0.8
VPS18-202ENST00000558474 SS18Q15532 418 aa10.07□□□□□ -0.8
VPS18-202ENST00000558474 MIAQ16674 131 aa10.07□□□□□ -0.8
VPS18-202ENST00000558474 RNASE13Q5GAN3 156 aaKnown RBP10.07□□□□□ -0.8
VPS18-202ENST00000558474 NFE4Q86UQ8 179 aa10.07□□□□□ -0.8
VPS18-202ENST00000558474 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
VPS18-202ENST00000558474 DPM2O94777 84 aa10.06□□□□□ -0.8
VPS18-202ENST00000558474 SCGB1D1O95968 90 aa10.06□□□□□ -0.8
VPS18-202ENST00000558474 HERVK_113P63121 156 aa10.06□□□□□ -0.8
VPS18-202ENST00000558474 TTC32Q5I0X7 151 aa10.06□□□□□ -0.8
VPS18-202ENST00000558474 ZC2HC1BQ5TFG8 222 aa10.06□□□□□ -0.8
VPS18-202ENST00000558474 Q8N3U1 123 aa10.06□□□□□ -0.8
VPS18-202ENST00000558474 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
VPS18-202ENST00000558474 TRAV8-3A0A0A6YYJ7 113 aa10.05□□□□□ -0.8
VPS18-202ENST00000558474 TRAV13-1A0A0B4J241 112 aa10.05□□□□□ -0.8
VPS18-202ENST00000558474 IGKCP01834 107 aa10.05□□□□□ -0.8
VPS18-202ENST00000558474 ENHOQ6UWT2 76 aa10.05□□□□□ -0.8
VPS18-202ENST00000558474 STARD9Q9P2P6 4700 aa10.05□□□□□ -0.8
VPS18-202ENST00000558474 LINC00242Q5T6M2 205 aa10.04□□□□□ -0.8
VPS18-202ENST00000558474 PLECQ15149 4684 aaKnown RBP10.03□□□□□ -0.8
VPS18-202ENST00000558474 IGLV5-45A0A087WSX0 123 aa10.03□□□□□ -0.8
VPS18-202ENST00000558474 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
VPS18-202ENST00000558474 PYY3Q5JQD4 70 aa10.03□□□□□ -0.8
VPS18-202ENST00000558474 UBE2WQ96B02 151 aa10.03□□□□□ -0.8
VPS18-202ENST00000558474 CHAC1Q9BUX1 264 aa10.03□□□□□ -0.8
VPS18-202ENST00000558474 GEMIN7Q9H840 131 aaKnown RBP10.03□□□□□ -0.8
VPS18-202ENST00000558474 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
VPS18-202ENST00000558474 SMIM6P0DI80 62 aa10.02□□□□□ -0.81
VPS18-202ENST00000558474 CD164L2Q6UWJ8 174 aa10.02□□□□□ -0.81
VPS18-202ENST00000558474 LINC01561Q8N1V8 128 aa10.02□□□□□ -0.81
VPS18-202ENST00000558474 RMI2Q96E14 147 aa10.02□□□□□ -0.81
VPS18-202ENST00000558474 COX11Q9Y6N1 276 aa10.02□□□□□ -0.81
VPS18-202ENST00000558474 NBDYA0A0U1RRE5 68 aa10.01□□□□□ -0.81
VPS18-202ENST00000558474 C11orf86A6NJI1 115 aa10.01□□□□□ -0.81
VPS18-202ENST00000558474 CLPSL2Q6UWE3 100 aa10.01□□□□□ -0.81
VPS18-202ENST00000558474 LINC00476Q8WZB0 136 aa10.01□□□□□ -0.81
VPS18-202ENST00000558474 PMCHL2Q9BQD1 86 aa10.01□□□□□ -0.81
VPS18-202ENST00000558474 IGHV3OR16-9A0A0B4J2B5 98 aa10□□□□□ -0.81
VPS18-202ENST00000558474 H3BRM9 83 aa10□□□□□ -0.81
VPS18-202ENST00000558474 CHCHD10Q8WYQ3 142 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms