RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TIMM21Q9BVV7 248 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 C1orf167Q5SNV9 1468 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 SCN7AQ01118 1682 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 WIZO95785 1651 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 ALS2Q96Q42 1657 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 TRBV7-3A0A075B6L6 115 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 IGHV3-64A0A075B6Q5 118 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 TRAV12-3A0A0B4J271 114 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 TMEM30CPA0ZSE6 113 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 SDHAF1A6NFY7 115 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 FAM223BA6NKX1 122 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 IQCF6A8MYZ5 107 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 F8WEM9 126 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 BCE1O60756 84 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 C3orf79P0CE67 100 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 COX8AP10176 69 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 MIFP14174 115 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 ERHP84090 104 aaKnown RBP1.4□□□□□ -2.19
SPG11-206ENST00000558093 KLKP1Q107X0 134 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 DEFB134Q4QY38 66 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 XAF1Q6GPH4 301 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 ZNF818PQ6ZRF7 136 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 SMIM5Q71RC9 77 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 C6orf201Q7Z4U5 140 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 C20orf197Q8N268 126 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 FAM167A-AS1Q96KT0 104 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 PROK2Q9HC23 129 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 PKD1L3Q7Z443 1732 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 TIAM2Q8IVF5 1701 aa1.4□□□□□ -2.19
SPG11-206ENST00000558093 ZNF142P52746 1687 aaPredicted RBP1.39□□□□□ -2.19
SPG11-206ENST00000558093 UNC13CQ8NB66 2214 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 TRBV25-1A0A075B6N4 114 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 FXYD6-FXYD2A0A087WZ82 144 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 TMSB15BA0A087X1C1 80 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 TRAV12-1A0A0B4J245 112 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 ZNF815PA8K554 130 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 FXYD1O00168 92 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 GCHFRP30047 84 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 SPINT3P49223 89 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 DEFB121Q5J5C9 76 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 CSAG1Q6PB30 78 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.39□□□□□ -2.19
SPG11-206ENST00000558093 FXYD6Q9H0Q3 95 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 DYNLRB1Q9NP97 96 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 PSENENQ9NZ42 101 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 C22orf24Q9Y442 160 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 ARL2-SNX15V9GYD0 113 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 V9GYH0 126 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 CDC42BPAQ5VT25 1732 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 PARP4Q9UKK3 1724 aaKnown RBP1.39□□□□□ -2.19
SPG11-206ENST00000558093 KDM6BO15054 1643 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 KIAA0556O60303 1618 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 CUL9Q8IWT3 2517 aa1.39□□□□□ -2.19
SPG11-206ENST00000558093 ARHGEF5Q12774 1597 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 UGGT1Q9NYU2 1555 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 RALGAPBQ86X10 1494 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 MYMXA0A1B0GTQ4 84 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 LOC285095A0A1B0GVY8 99 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 A0A1B0GWA3 101 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 A0A1W2PNM2 257 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 C2orf70A6NJV1 201 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 TMEM14DPA8MWL7 114 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 C10orf142B7Z368 130 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 H3BVH4 76 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 HMGN2P05204 90 aaKnown RBP1.38□□□□□ -2.19
SPG11-206ENST00000558093 COX6CP09669 75 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 UBE2D1P51668 147 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 PYDC2Q56P42 97 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 C2orf82Q6UX34 121 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 ZNF833PQ6ZTB9 187 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 C9orf163Q8N9P6 203 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 LIMD2Q9BT23 127 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 FAM103A1Q9BTL3 118 aaKnown RBP1.38□□□□□ -2.19
SPG11-206ENST00000558093 LHFPL6Q9Y693 200 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 CDC42BPGQ6DT37 1551 aa1.38□□□□□ -2.19
SPG11-206ENST00000558093 NKTRP30414 1462 aaKnown RBP1.37□□□□□ -2.19
SPG11-206ENST00000558093 PAPPAQ13219 1627 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 BCORQ6W2J9 1755 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 COL4A1P02462 1669 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 SHPRHQ149N8 1683 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 TRAV23DV6A0A075B6W5 121 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 CEBPZOSA8MTT3 80 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 PLGLAQ15195 96 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 PSMG4Q5JS54 123 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 BAGE3Q86Y29 109 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 BAGE2Q86Y30 109 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 CDC42SE2Q9NRR3 84 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 TMEM14BQ9NUH8 114 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 GNG13Q9P2W3 67 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 DNAJC13O75165 2243 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 VWDEQ8N2E2 1590 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 ABCA5Q8WWZ7 1642 aa1.37□□□□□ -2.19
SPG11-206ENST00000558093 DLEC1Q9Y238 1755 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 NCOA6Q14686 2063 aaPredicted RBP1.36□□□□□ -2.19
SPG11-206ENST00000558093 COL4A5P29400 1685 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 RREB1Q92766 1687 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 ZFHX2Q9C0A1 2572 aaPredicted RBP1.36□□□□□ -2.19
SPG11-206ENST00000558093 IGLV3-32A0A0A0MS00 114 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 TRBV6-7A0A0A0MS04 114 aa1.36□□□□□ -2.19
SPG11-206ENST00000558093 TRBV10-1A0A0K0K1A3 114 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms