RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 MUC22E2RYF6 1773 aaPredicted RBP1.23□□□□□ -2.21
PTPN21-209ENST00000557249 COL4A5P29400 1685 aa1.23□□□□□ -2.21
PTPN21-209ENST00000557249 CACNA1DQ01668 2161 aa1.23□□□□□ -2.21
PTPN21-209ENST00000557249 LRP6O75581 1613 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 TRBV6-8A0A0A6YYG3 113 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 UBE2L5PA0A1B0GUS4 154 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 LOC285095A0A1B0GVY8 99 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 F2Z2F3 143 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 GNGT2O14610 69 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 LINC00032P0C843 101 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 C3orf79P0CE67 100 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 COX7CP15954 63 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 FAUP35544 74 aaKnown RBP1.22□□□□□ -2.21
PTPN21-209ENST00000557249 UBE2L3P68036 154 aaKnown RBP1.22□□□□□ -2.21
PTPN21-209ENST00000557249 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.22□□□□□ -2.21
PTPN21-209ENST00000557249 TOMM5Q8N4H5 51 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 LIMD2Q9BT23 127 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 FAM103A1Q9BTL3 118 aaKnown RBP1.22□□□□□ -2.21
PTPN21-209ENST00000557249 CYSTM1Q9H1C7 97 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 HILPDAQ9Y5L2 63 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 HIVEP2P31629 2446 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 MYO9BQ13459 2157 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 MRC1P22897 1456 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 MYOFQ9NZM1 2061 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 NHSL1Q5SYE7 1610 aa1.22□□□□□ -2.21
PTPN21-209ENST00000557249 ZNF831Q5JPB2 1677 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 PXDNQ92626 1479 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 TRAV2A0A0B4J234 112 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 IGKV2-24A0A0C4DH68 120 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 hADV29S1A0JD25 119 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 TMEM30CPA0ZSE6 113 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 A6NIN4 97 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 FXYD1O00168 92 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 CNBPP62633 177 aaKnown RBP1.21□□□□□ -2.22
PTPN21-209ENST00000557249 RHOHQ15669 191 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 PMCHL1Q16048 86 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 C9orf116Q5BN46 136 aaPredicted RBP1.21□□□□□ -2.22
PTPN21-209ENST00000557249 CSAG1Q6PB30 78 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 IGFL1Q6UW32 110 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 COMMD6Q7Z4G1 85 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 C15orf53Q8NAA6 179 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 PPDPFLQ8WWR9 84 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 PATE1Q8WXA2 126 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 LINC00474Q9P2X8 69 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 DUOX1Q9NRD9 1551 aa1.21□□□□□ -2.22
PTPN21-209ENST00000557249 COL4A2P08572 1712 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 COL4A6Q14031 1691 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 GPR179Q6PRD1 2367 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 SEC16AO15027 2179 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 TRBV6-7A0A0A0MS04 114 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 PIGBOS1A0A0B4J2F0 54 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 TRGV4A0A0C4DH28 118 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 TRBV7-7A0A0K0K1E9 115 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 H3BRN7 92 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 CCL16O15467 120 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 SSSCA1O60232 199 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 ATP5EP56381 51 aaPredicted RBP1.2□□□□□ -2.22
PTPN21-209ENST00000557249 NCBP2-AS2Q69YL0 99 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 LYPD5Q6UWN5 251 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 SMIM4Q8WVI0 70 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 PPP1R1CQ8WVI7 109 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 IFI27L1Q96BM0 104 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 ODF3Q96PU9 254 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 ORMDL1Q9P0S3 153 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 CEP192Q8TEP8 1941 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 NHSQ6T4R5 1651 aa1.2□□□□□ -2.22
PTPN21-209ENST00000557249 MPDZO75970 2070 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 TRAV13-2A0A0B4J235 113 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 TRBV10-3A0A0K0K1G6 114 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 CXorf51AA0A1B0GTR3 108 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 GYPAP02724 150 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 CCKP06307 115 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 SMIM13P0DJ93 91 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 COX8AP10176 69 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 ASIPP42127 132 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 KRTAP10-10P60014 251 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 SNRPFP62306 86 aaKnown RBP1.19□□□□□ -2.22
PTPN21-209ENST00000557249 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 CFAP126Q5VTH2 177 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 SMIM5Q71RC9 77 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 BAGE3Q86Y29 109 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 BAGE2Q86Y30 109 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 LINC00304Q8N9R0 145 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 CDC42SE1Q9NRR8 79 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 MRPL35Q9NZE8 188 aaKnown RBP1.19□□□□□ -2.22
PTPN21-209ENST00000557249 HIGD1BQ9P298 99 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 ARL2-SNX15V9GYD0 113 aa1.19□□□□□ -2.22
PTPN21-209ENST00000557249 TRAV12-3A0A0B4J271 114 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 TRBV10-1A0A0K0K1A3 114 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 TRBV6-4A0A1B0GX49 114 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 NUPR2A6NF83 97 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 HCG22E2RYF7 251 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 PPYP01298 95 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 IGHV3-33P01772 117 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 RNASE2P10153 161 aaKnown RBP1.18□□□□□ -2.22
PTPN21-209ENST00000557249 RNASE3P12724 160 aaKnown RBP1.18□□□□□ -2.22
PTPN21-209ENST00000557249 EFNA4P52798 201 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 C10orf55Q5SWW7 151 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 C4orf3Q8WVX3 66 aa1.18□□□□□ -2.22
PTPN21-209ENST00000557249 TTTY12Q9BZ98 90 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms