RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TRBV10-1A0A0K0K1A3 114 aa7.18□□□□□ -1.26
TMEM260-211ENST00000556648 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
TMEM260-211ENST00000556648 FABP2P12104 132 aa7.18□□□□□ -1.26
TMEM260-211ENST00000556648 UBE2D1P51668 147 aa7.18□□□□□ -1.26
TMEM260-211ENST00000556648 CRYBA4P53673 196 aa7.18□□□□□ -1.26
TMEM260-211ENST00000556648 C10orf126Q8N4M7 172 aa7.18□□□□□ -1.26
TMEM260-211ENST00000556648 C2CD3Q4AC94 2353 aa7.17□□□□□ -1.26
TMEM260-211ENST00000556648 TINCRA0A1B0GVN0 87 aa7.17□□□□□ -1.26
TMEM260-211ENST00000556648 IGHV3-30P01768 117 aa7.17□□□□□ -1.26
TMEM260-211ENST00000556648 IGHV3-30-5P0DP03 117 aa7.17□□□□□ -1.26
TMEM260-211ENST00000556648 GTF2H5Q6ZYL4 71 aa7.17□□□□□ -1.26
TMEM260-211ENST00000556648 SBSPONQ8IVN8 264 aa7.17□□□□□ -1.26
TMEM260-211ENST00000556648 TIMM21Q9BVV7 248 aa7.17□□□□□ -1.26
TMEM260-211ENST00000556648 NOTCH2Q04721 2471 aa7.17□□□□□ -1.26
TMEM260-211ENST00000556648 COX6A2Q02221 97 aa7.17□□□□□ -1.26
TMEM260-211ENST00000556648 SPANXB1Q9NS25 103 aaPredicted RBP7.17□□□□□ -1.26
TMEM260-211ENST00000556648 TRGV4A0A0C4DH28 118 aa7.16□□□□□ -1.26
TMEM260-211ENST00000556648 FHL2Q14192 279 aa7.16□□□□□ -1.26
TMEM260-211ENST00000556648 DAZ4Q86SG3 579 aaKnown RBP7.16□□□□□ -1.26
TMEM260-211ENST00000556648 DAZ3Q9NR90 486 aaKnown RBP7.16□□□□□ -1.26
TMEM260-211ENST00000556648 X6R8D5 127 aa7.16□□□□□ -1.26
TMEM260-211ENST00000556648 NSD1Q96L73 2696 aaPredicted RBP7.16□□□□□ -1.26
TMEM260-211ENST00000556648 EIF4EBP3O60516 100 aaPredicted RBP7.15□□□□□ -1.26
TMEM260-211ENST00000556648 APOMO95445 188 aa7.15□□□□□ -1.26
TMEM260-211ENST00000556648 DEFB130BP0DP73 79 aa7.15□□□□□ -1.26
TMEM260-211ENST00000556648 DEFB130AP0DP74 79 aa7.15□□□□□ -1.26
TMEM260-211ENST00000556648 C9orf66Q5T8R8 295 aa7.15□□□□□ -1.26
TMEM260-211ENST00000556648 DGAT2L7PQ6IED9 249 aa7.15□□□□□ -1.26
TMEM260-211ENST00000556648 CITED1Q99966 193 aa7.15□□□□□ -1.26
TMEM260-211ENST00000556648 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.27
TMEM260-211ENST00000556648 A0A0J9YXY3 114 aa7.15□□□□□ -1.27
TMEM260-211ENST00000556648 VSIG2Q96IQ7 327 aa7.15□□□□□ -1.27
TMEM260-211ENST00000556648 CDKN2A-AS1Q9UH64 79 aa7.15□□□□□ -1.27
TMEM260-211ENST00000556648 HIVEP1P15822 2718 aa7.14□□□□□ -1.27
TMEM260-211ENST00000556648 GEMIN7Q9H840 131 aaKnown RBP7.14□□□□□ -1.27
TMEM260-211ENST00000556648 PGPEP1Q9NXJ5 209 aa7.14□□□□□ -1.27
TMEM260-211ENST00000556648 VWFP04275 2813 aa7.14□□□□□ -1.27
TMEM260-211ENST00000556648 TRBV6-4A0A1B0GX49 114 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 TSPAN13O95857 204 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 CFC1BP0CG36 223 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 CFC1P0CG37 223 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 LINC00242Q5T6M2 205 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 SFTA2Q6UW10 78 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 LITAFQ99732 161 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 IGLV5-45A0A087WSX0 123 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 TRAV13-1A0A0B4J241 112 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 TMEM238LA0A1B0GVL6 79 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 A6NJY4 79 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 DEFB4AO15263 64 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 TMEM243Q9BU79 118 aa7.13□□□□□ -1.27
TMEM260-211ENST00000556648 FOSL1P15407 271 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 INSL3P51460 131 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 TIRAPP58753 221 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 GAGE6Q13070 117 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 DEFB135Q30KP9 77 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 MUSTN1Q8IVN3 82 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 LINC00612Q8N6U2 182 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 NDUFA12Q9UI09 145 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 TENM1Q9UKZ4 2725 aa7.12□□□□□ -1.27
TMEM260-211ENST00000556648 A4D1N5 150 aa7.11□□□□□ -1.27
TMEM260-211ENST00000556648 MTURNQ8N3F0 131 aa7.11□□□□□ -1.27
TMEM260-211ENST00000556648 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
TMEM260-211ENST00000556648 GTSF1LQ9H1H1 148 aa7.11□□□□□ -1.27
TMEM260-211ENST00000556648 CDC42SE2Q9NRR3 84 aa7.11□□□□□ -1.27
TMEM260-211ENST00000556648 RBX1P62877 108 aa7.11□□□□□ -1.27
TMEM260-211ENST00000556648 OCIAD2Q56VL3 154 aa7.11□□□□□ -1.27
TMEM260-211ENST00000556648 CSDC2Q9Y534 153 aaKnown RBP7.11□□□□□ -1.27
TMEM260-211ENST00000556648 H3BMG7 143 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 UBE2L6O14933 153 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 ZFAND6Q6FIF0 208 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 KIR2DL5BQ8NHK3 375 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 IGLV4-60A0A075B6I1 120 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 TMEM238C9JI98 176 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 NPC2P61916 151 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 RNF151Q2KHN1 245 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 FAM222AQ5U5X8 452 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 FAM19A3Q7Z5A8 133 aa7.1□□□□□ -1.27
TMEM260-211ENST00000556648 SMIM1B2RUZ4 78 aa7.09□□□□□ -1.27
TMEM260-211ENST00000556648 CIDEAO60543 219 aa7.09□□□□□ -1.27
TMEM260-211ENST00000556648 GYPEP15421 78 aa7.09□□□□□ -1.27
TMEM260-211ENST00000556648 IGKV3OR2-268A0A0C4DH90 116 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 IGLV5-39A0A0G2JS06 123 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 F5H768 121 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 HERVK_113P63121 156 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 DAND5Q8N907 189 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 A0A096LPF7 62 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 TRBV6-8A0A0A6YYG3 113 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 IGHV4-28A0A0C4DH34 117 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 WFDC2Q14508 124 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 CHCHD5Q9BSY4 110 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 CELA1Q9UNI1 258 aa7.08□□□□□ -1.28
TMEM260-211ENST00000556648 SMIM9A6NGZ8 99 aa7.07□□□□□ -1.28
TMEM260-211ENST00000556648 NDUFA1O15239 70 aa7.07□□□□□ -1.28
TMEM260-211ENST00000556648 MIAQ16674 131 aa7.07□□□□□ -1.28
TMEM260-211ENST00000556648 ZNF625Q96I27 306 aaPredicted RBP7.07□□□□□ -1.28
TMEM260-211ENST00000556648 SPANXDQ9BXN6 97 aa7.07□□□□□ -1.28
TMEM260-211ENST00000556648 SPANXCQ9NY87 97 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms