RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 S100A4P26447 101 aaKnown RBP1.39□□□□□ -2.19
SCFD1-219ENST00000556413 S100A7P31151 101 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 ATP5IP56385 69 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-219ENST00000556413 AP3S2P59780 193 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 PRR3P79522 188 aaKnown RBP1.39□□□□□ -2.19
SCFD1-219ENST00000556413 RAB31Q13636 194 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 ZNF56Q15929 161 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 GUK1Q16774 197 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 MAJINQ3KP22 176 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 LINC00269Q8N2A0 174 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 C12orf45Q8N5I9 185 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-219ENST00000556413 OR10AG1Q8NH19 301 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 CMTM2Q8TAZ6 248 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 C15orf40Q8WUR7 153 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 MITD1Q8WV92 249 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 ZC2HC1AQ96GY0 325 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 CAMK2N2Q96S95 79 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 SLC25A21Q9BQT8 299 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-219ENST00000556413 WDR61Q9GZS3 305 aaKnown RBP1.39□□□□□ -2.19
SCFD1-219ENST00000556413 DPH3P1Q9H4G8 78 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 OTORQ9NRC9 128 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 RABL2AQ9UBK7 228 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-219ENST00000556413 PRELID1Q9Y255 219 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 URGCP-MRPS24S4R325 110 aa1.39□□□□□ -2.19
SCFD1-219ENST00000556413 A0A096LNI7 61 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 TRBV6-4A0A1B0GX49 114 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 B4DEV8 164 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 FNDC10F2Z333 226 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 LYRM1O43325 122 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 TCRBP04435 133 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 TCRAP04437 139 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 ARMS2P0C7Q2 107 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 GZMBP10144 247 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 MGST1P10620 155 aaKnown RBP1.38□□□□□ -2.19
SCFD1-219ENST00000556413 PVALBP20472 110 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-219ENST00000556413 S100A11P31949 105 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 S100A5P33763 92 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 CRIP1P50238 77 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 TMBIM6P55061 237 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 TAS2R30P59541 319 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 SEC61GP60059 68 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 UBE2D3P61077 147 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 UBE2D2P62837 147 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 RBX1P62877 108 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 HBG1P69891 147 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 HBG2P69892 147 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 FLI1Q01543 452 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-219ENST00000556413 COX6A2Q02221 97 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 PDE6HQ13956 83 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 SMUG1Q53HV7 270 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 KHDC3LQ587J8 217 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 KRTAP26-1Q6PEX3 210 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 SDIM1Q6ZPB5 146 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 S100A7AQ86SG5 101 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 Q86TA4 180 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 SPACA4Q8TDM5 124 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 C2orf50Q96LR7 162 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 ATP5SQ99766 215 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 GGACTQ9BVM4 153 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 CACFD1Q9UGQ2 172 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 ARL2-SNX15V9GYD0 113 aa1.38□□□□□ -2.19
SCFD1-219ENST00000556413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-219ENST00000556413 TRAV26-2A0A0B4J265 109 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 A0A0J9YXV3 536 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 A0A0U1RQV1 116 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-219ENST00000556413 RBAKDNA6NC62 111 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 H7C1H1 209 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 IFNA7P01567 189 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 APCSP02743 223 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 NMBP08949 121 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 GCHFRP30047 84 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 CDC34P49427 236 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-219ENST00000556413 NKX2-5P52952 324 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-219ENST00000556413 H2BFSP57053 126 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 IL15RAQ13261 267 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 ZNF726P1Q15940 193 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 TDRG1Q3Y452 100 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 ORMDL2Q53FV1 153 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 Q5BKY6 102 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 RNASE13Q5GAN3 156 aaKnown RBP1.37□□□□□ -2.19
SCFD1-219ENST00000556413 C6orf226Q5I0X4 101 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 PHF5AQ7RTV0 110 aaKnown RBP1.37□□□□□ -2.19
SCFD1-219ENST00000556413 C9orf163Q8N9P6 203 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 SCGB1C1Q8TD33 95 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 PPP1R1CQ8WVI7 109 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 KCNS1Q96KK3 526 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 DERL1Q9BUN8 251 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 ZNF471Q9BX82 626 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-219ENST00000556413 HSPB11Q9Y547 144 aa1.37□□□□□ -2.19
SCFD1-219ENST00000556413 IGHV3-64A0A075B6Q5 118 aa1.36□□□□□ -2.19
SCFD1-219ENST00000556413 TRBV6-8A0A0A6YYG3 113 aa1.36□□□□□ -2.19
SCFD1-219ENST00000556413 A0A0D9SG52 128 aa1.36□□□□□ -2.19
SCFD1-219ENST00000556413 FAM240BA0A1B0GVZ2 78 aa1.36□□□□□ -2.19
SCFD1-219ENST00000556413 A0A1W2PPV4 95 aa1.36□□□□□ -2.19
SCFD1-219ENST00000556413 NAP1L6A6NFF2 107 aa1.36□□□□□ -2.19
SCFD1-219ENST00000556413 CENPXA8MT69 81 aa1.36□□□□□ -2.19
SCFD1-219ENST00000556413 A8MWV9 139 aa1.36□□□□□ -2.19
SCFD1-219ENST00000556413 KRBOX1C9JBD0 128 aa1.36□□□□□ -2.19
SCFD1-219ENST00000556413 C17orf112F2Z3M2 114 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms