RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CASC10Q5T4H9 136 aa7.56□□□□□ -1.2
TMEM260-208ENST00000555905 OR5A1Q8NGJ0 315 aa7.56□□□□□ -1.2
TMEM260-208ENST00000555905 TIMM17AQ99595 171 aa7.56□□□□□ -1.2
TMEM260-208ENST00000555905 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
TMEM260-208ENST00000555905 IGIPA6NJ69 53 aa7.55□□□□□ -1.2
TMEM260-208ENST00000555905 NPSP0C0P6 89 aa7.55□□□□□ -1.2
TMEM260-208ENST00000555905 PAPPA-AS1Q5QFB9 102 aa7.55□□□□□ -1.2
TMEM260-208ENST00000555905 WFDC10BQ8IUB3 73 aa7.55□□□□□ -1.2
TMEM260-208ENST00000555905 HIST1H2BLQ99880 126 aa7.55□□□□□ -1.2
TMEM260-208ENST00000555905 UPK3BQ9BT76 320 aa7.55□□□□□ -1.2
TMEM260-208ENST00000555905 CSDC2Q9Y534 153 aaKnown RBP7.55□□□□□ -1.2
TMEM260-208ENST00000555905 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
TMEM260-208ENST00000555905 SIVA1O15304 175 aa7.54□□□□□ -1.2
TMEM260-208ENST00000555905 RBX1P62877 108 aa7.54□□□□□ -1.2
TMEM260-208ENST00000555905 MPV17L2Q567V2 206 aa7.54□□□□□ -1.2
TMEM260-208ENST00000555905 Q6ZN92 141 aa7.54□□□□□ -1.2
TMEM260-208ENST00000555905 IFI27L1Q96BM0 104 aa7.54□□□□□ -1.2
TMEM260-208ENST00000555905 IGLV4-3A0A075B6K6 122 aa7.53□□□□□ -1.2
TMEM260-208ENST00000555905 IFITM10A6NMD0 228 aa7.53□□□□□ -1.2
TMEM260-208ENST00000555905 PRSS1P07477 247 aa7.53□□□□□ -1.2
TMEM260-208ENST00000555905 MRPS36P82909 103 aaKnown RBP7.53□□□□□ -1.2
TMEM260-208ENST00000555905 LINC01556Q5JQF7 62 aa7.53□□□□□ -1.2
TMEM260-208ENST00000555905 LINC00173Q6ZV60 143 aa7.53□□□□□ -1.2
TMEM260-208ENST00000555905 ZNF664Q8N3J9 261 aa7.53□□□□□ -1.2
TMEM260-208ENST00000555905 Q8N976 141 aa7.53□□□□□ -1.2
TMEM260-208ENST00000555905 MAP1LC3CQ9BXW4 147 aa7.53□□□□□ -1.2
TMEM260-208ENST00000555905 VCX2Q9H322 139 aa7.53□□□□□ -1.2
TMEM260-208ENST00000555905 TENM2Q9NT68 2774 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 IGLV4-60A0A075B6I1 120 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 IGHV3-30P01768 117 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 IGHV3-33P01772 117 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 ANGP03950 147 aaKnown RBP7.52□□□□□ -1.21
TMEM260-208ENST00000555905 DNAH10OSP0CZ25 163 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 IGHV3-30-3P0DP02 117 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 TEX43Q6ZNM6 134 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 Q6ZUT4 128 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
TMEM260-208ENST00000555905 Q9H8V8 135 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
TMEM260-208ENST00000555905 STARD9Q9P2P6 4700 aa7.51□□□□□ -1.21
TMEM260-208ENST00000555905 TRAV9-2A0A087WT02 112 aa7.51□□□□□ -1.21
TMEM260-208ENST00000555905 H0Y8G0 127 aa7.51□□□□□ -1.21
TMEM260-208ENST00000555905 KRTDAPP60985 99 aa7.51□□□□□ -1.21
TMEM260-208ENST00000555905 Q8N3U1 123 aa7.51□□□□□ -1.21
TMEM260-208ENST00000555905 BAALCQ8WXS3 180 aa7.51□□□□□ -1.21
TMEM260-208ENST00000555905 C2orf88Q9BSF0 95 aa7.51□□□□□ -1.21
TMEM260-208ENST00000555905 PMVKQ15126 192 aa7.5□□□□□ -1.21
TMEM260-208ENST00000555905 RNASE13Q5GAN3 156 aaKnown RBP7.5□□□□□ -1.21
TMEM260-208ENST00000555905 LGALS9CQ6DKI2 356 aa7.5□□□□□ -1.21
TMEM260-208ENST00000555905 LINC00269Q8N2A0 174 aa7.5□□□□□ -1.21
TMEM260-208ENST00000555905 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
TMEM260-208ENST00000555905 TRAV12-1A0A0B4J245 112 aa7.49□□□□□ -1.21
TMEM260-208ENST00000555905 SYS1-DBNDD2H3BUS1 97 aa7.49□□□□□ -1.21
TMEM260-208ENST00000555905 K7EP13 123 aa7.49□□□□□ -1.21
TMEM260-208ENST00000555905 C3orf79P0CE67 100 aa7.49□□□□□ -1.21
TMEM260-208ENST00000555905 C10orf126Q8N4M7 172 aa7.49□□□□□ -1.21
TMEM260-208ENST00000555905 OR10D4PQ8NGN7 298 aa7.49□□□□□ -1.21
TMEM260-208ENST00000555905 FAM104AQ969W3 186 aa7.49□□□□□ -1.21
TMEM260-208ENST00000555905 AMELXQ99217 191 aa7.49□□□□□ -1.21
TMEM260-208ENST00000555905 KLK12Q9UKR0 248 aa7.49□□□□□ -1.21
TMEM260-208ENST00000555905 PLECQ15149 4684 aaKnown RBP7.48□□□□□ -1.21
TMEM260-208ENST00000555905 IGKV3OR2-268A0A0C4DH90 116 aa7.48□□□□□ -1.21
TMEM260-208ENST00000555905 PRSS29PA6NIE9 313 aa7.48□□□□□ -1.21
TMEM260-208ENST00000555905 CRPP02741 224 aa7.48□□□□□ -1.21
TMEM260-208ENST00000555905 REG3AQ06141 175 aa7.48□□□□□ -1.21
TMEM260-208ENST00000555905 ZC2HC1BQ5TFG8 222 aa7.48□□□□□ -1.21
TMEM260-208ENST00000555905 PET117Q6UWS5 81 aa7.48□□□□□ -1.21
TMEM260-208ENST00000555905 SPATA12Q7Z6I5 190 aa7.48□□□□□ -1.21
TMEM260-208ENST00000555905 TRAV13-1A0A0B4J241 112 aa7.47□□□□□ -1.21
TMEM260-208ENST00000555905 TMEM238LA0A1B0GVL6 79 aa7.47□□□□□ -1.21
TMEM260-208ENST00000555905 C20orf202A1L168 122 aa7.47□□□□□ -1.21
TMEM260-208ENST00000555905 SS18Q15532 418 aa7.47□□□□□ -1.21
TMEM260-208ENST00000555905 TTC32Q5I0X7 151 aa7.47□□□□□ -1.21
TMEM260-208ENST00000555905 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
TMEM260-208ENST00000555905 UBE2WQ96B02 151 aa7.47□□□□□ -1.21
TMEM260-208ENST00000555905 CHTOPQ9Y3Y2 248 aaKnown RBP7.47□□□□□ -1.21
TMEM260-208ENST00000555905 CCL25O15444 150 aa7.46□□□□□ -1.22
TMEM260-208ENST00000555905 LY6G6CO95867 125 aa7.46□□□□□ -1.22
TMEM260-208ENST00000555905 UBE2D1P51668 147 aa7.46□□□□□ -1.22
TMEM260-208ENST00000555905 AKR1D1P51857 326 aa7.46□□□□□ -1.22
TMEM260-208ENST00000555905 LINC00476Q8WZB0 136 aa7.46□□□□□ -1.22
TMEM260-208ENST00000555905 PRR34Q9NV39 138 aa7.46□□□□□ -1.22
TMEM260-208ENST00000555905 TRAV8-3A0A0A6YYJ7 113 aa7.45□□□□□ -1.22
TMEM260-208ENST00000555905 LINC00959A0A1B0GUT2 108 aa7.45□□□□□ -1.22
TMEM260-208ENST00000555905 IBA57-AS1B1ANH7 110 aa7.45□□□□□ -1.22
TMEM260-208ENST00000555905 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
TMEM260-208ENST00000555905 SEC11AP67812 179 aa7.45□□□□□ -1.22
TMEM260-208ENST00000555905 ODF1Q14990 250 aa7.45□□□□□ -1.22
TMEM260-208ENST00000555905 MIAQ16674 131 aa7.45□□□□□ -1.22
TMEM260-208ENST00000555905 ENHOQ6UWT2 76 aa7.45□□□□□ -1.22
TMEM260-208ENST00000555905 TRAV8-4A0A0B4J246 113 aa7.44□□□□□ -1.22
TMEM260-208ENST00000555905 NBDYA0A0U1RRE5 68 aa7.44□□□□□ -1.22
TMEM260-208ENST00000555905 F8VRH5 84 aa7.44□□□□□ -1.22
TMEM260-208ENST00000555905 DPM2O94777 84 aa7.44□□□□□ -1.22
TMEM260-208ENST00000555905 SCGB1D1O95968 90 aa7.44□□□□□ -1.22
TMEM260-208ENST00000555905 PLNP26678 52 aa7.44□□□□□ -1.22
TMEM260-208ENST00000555905 XP32Q5T750 250 aa7.44□□□□□ -1.22
TMEM260-208ENST00000555905 LINC01545Q5VT33 79 aa7.44□□□□□ -1.22
TMEM260-208ENST00000555905 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms