RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 FANCAO15360 1455 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 ESPL1Q14674 2120 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 UNC13BO14795 1591 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 FBN3Q75N90 2809 aa1.67□□□□□ -2.14
VRK1-205ENST00000555402 EPRSP07814 1512 aaKnown RBP1.66□□□□□ -2.14
VRK1-205ENST00000555402 MAP3K1Q13233 1512 aa1.66□□□□□ -2.14
VRK1-205ENST00000555402 KIF14Q15058 1648 aa1.66□□□□□ -2.14
VRK1-205ENST00000555402 MAP3K4Q9Y6R4 1608 aa1.66□□□□□ -2.14
VRK1-205ENST00000555402 SUPT6HQ7KZ85 1726 aaKnown RBP1.66□□□□□ -2.14
VRK1-205ENST00000555402 H3BQF6 201 aa1.66□□□□□ -2.14
VRK1-205ENST00000555402 HMGN4O00479 90 aa1.66□□□□□ -2.14
VRK1-205ENST00000555402 NMBP08949 121 aa1.66□□□□□ -2.14
VRK1-205ENST00000555402 COL4A6Q14031 1691 aa1.65□□□□□ -2.15
VRK1-205ENST00000555402 ATP10BO94823 1461 aa1.65□□□□□ -2.15
VRK1-205ENST00000555402 EFNA4P52798 201 aa1.65□□□□□ -2.15
VRK1-205ENST00000555402 CCL18P55774 89 aa1.65□□□□□ -2.15
VRK1-205ENST00000555402 VMO1Q7Z5L0 202 aa1.65□□□□□ -2.15
VRK1-205ENST00000555402 CDC42SE2Q9NRR3 84 aa1.65□□□□□ -2.15
VRK1-205ENST00000555402 UBR1Q8IWV7 1749 aa1.65□□□□□ -2.15
VRK1-205ENST00000555402 IFT172Q9UG01 1749 aa1.65□□□□□ -2.15
VRK1-205ENST00000555402 MED12Q93074 2177 aa1.65□□□□□ -2.15
VRK1-205ENST00000555402 CDK13Q14004 1512 aaKnown RBP1.65□□□□□ -2.15
VRK1-205ENST00000555402 SPTBP11277 2137 aa1.64□□□□□ -2.15
VRK1-205ENST00000555402 LOC285095A0A1B0GVY8 99 aa1.64□□□□□ -2.15
VRK1-205ENST00000555402 H7BZZ5 65 aa1.64□□□□□ -2.15
VRK1-205ENST00000555402 NCR3O14931 201 aa1.64□□□□□ -2.15
VRK1-205ENST00000555402 S100A16Q96FQ6 103 aaKnown RBP1.64□□□□□ -2.15
VRK1-205ENST00000555402 NXT2Q9NPJ8 142 aaKnown RBP1.64□□□□□ -2.15
VRK1-205ENST00000555402 TMEM14BQ9NUH8 114 aa1.64□□□□□ -2.15
VRK1-205ENST00000555402 R4GMQ9 66 aa1.64□□□□□ -2.15
VRK1-205ENST00000555402 DIP2BQ9P265 1576 aa1.64□□□□□ -2.15
VRK1-205ENST00000555402 MAP2P11137 1827 aaKnown RBP1.63□□□□□ -2.15
VRK1-205ENST00000555402 ERVK-7P63135 1459 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 KIAA0100Q14667 2235 aaKnown RBP1.63□□□□□ -2.15
VRK1-205ENST00000555402 KDM5DQ9BY66 1539 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 DCAF1Q9Y4B6 1507 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 UQCRHP07919 91 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 C6orf52Q5T4I8 152 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 TMEM170BQ5T4T1 132 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 BPESC1Q9GZL8 116 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 KIF21AQ7Z4S6 1674 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 EDC4Q6P2E9 1401 aaKnown RBP1.63□□□□□ -2.15
VRK1-205ENST00000555402 RRBP1Q9P2E9 1410 aaKnown RBP1.63□□□□□ -2.15
VRK1-205ENST00000555402 LRRIQ1Q96JM4 1722 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 NLRP1Q9C000 1473 aa1.63□□□□□ -2.15
VRK1-205ENST00000555402 HMGXB3Q12766 1538 aa1.62□□□□□ -2.15
VRK1-205ENST00000555402 TRBV30A0A0K0K1B3 111 aa1.62□□□□□ -2.15
VRK1-205ENST00000555402 TMEM14DPA8MWL7 114 aa1.62□□□□□ -2.15
VRK1-205ENST00000555402 LINC00575Q6W349 94 aa1.62□□□□□ -2.15
VRK1-205ENST00000555402 POLA1P09884 1462 aaPredicted RBP1.62□□□□□ -2.15
VRK1-205ENST00000555402 PLIN4Q96Q06 1357 aa1.61□□□□□ -2.15
VRK1-205ENST00000555402 SPAG17Q6Q759 2223 aa1.61□□□□□ -2.15
VRK1-205ENST00000555402 TRAV1-2A0A0B4J238 106 aa1.61□□□□□ -2.15
VRK1-205ENST00000555402 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
VRK1-205ENST00000555402 PMCHL1Q16048 86 aa1.61□□□□□ -2.15
VRK1-205ENST00000555402 FAM223AQ8IWN6 122 aa1.61□□□□□ -2.15
VRK1-205ENST00000555402 S100A13Q99584 98 aa1.61□□□□□ -2.15
VRK1-205ENST00000555402 WFDC6Q9BQY6 131 aa1.61□□□□□ -2.15
VRK1-205ENST00000555402 NUP188Q5SRE5 1749 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 CTXND1A0A1B0GTU2 59 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 IGLC7A0M8Q6 106 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 F8VRH5 84 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 M0R135 149 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 ACYP2P14621 99 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 TDRG1Q3Y452 100 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 C10orf99Q6UWK7 81 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 BAGE3Q86Y29 109 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 Q96NJ1 140 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 ARL2-SNX15V9GYD0 113 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 BTAF1O14981 1849 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 NRXN1Q9ULB1 1477 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 PDCD11Q14690 1871 aaKnown RBP1.6□□□□□ -2.15
VRK1-205ENST00000555402 CACNA1BQ00975 2339 aa1.6□□□□□ -2.15
VRK1-205ENST00000555402 ZNF236Q9UL36 1845 aa1.59□□□□□ -2.15
VRK1-205ENST00000555402 TRBV25-1A0A075B6N4 114 aa1.59□□□□□ -2.15
VRK1-205ENST00000555402 TRGV1A0A0A0MS02 117 aa1.59□□□□□ -2.15
VRK1-205ENST00000555402 FAM223BA6NKX1 122 aa1.59□□□□□ -2.15
VRK1-205ENST00000555402 PSMG4Q5JS54 123 aa1.59□□□□□ -2.15
VRK1-205ENST00000555402 AMELXQ99217 191 aa1.59□□□□□ -2.15
VRK1-205ENST00000555402 HIGD1BQ9P298 99 aa1.59□□□□□ -2.15
VRK1-205ENST00000555402 RABAC1Q9UI14 185 aa1.59□□□□□ -2.15
VRK1-205ENST00000555402 TECTAO75443 2155 aa1.59□□□□□ -2.16
VRK1-205ENST00000555402 COL6A6A6NMZ7 2263 aa1.59□□□□□ -2.16
VRK1-205ENST00000555402 ABCA4P78363 2273 aa1.58□□□□□ -2.16
VRK1-205ENST00000555402 SAA2P0DJI9 122 aaPredicted RBP1.58□□□□□ -2.16
VRK1-205ENST00000555402 BAGE2Q86Y30 109 aa1.58□□□□□ -2.16
VRK1-205ENST00000555402 SPCS1Q9Y6A9 102 aa1.58□□□□□ -2.16
VRK1-205ENST00000555402 KIF20BQ96Q89 1820 aa1.58□□□□□ -2.16
VRK1-205ENST00000555402 PI4KAP42356 2102 aa1.58□□□□□ -2.16
VRK1-205ENST00000555402 IQSEC2Q5JU85 1478 aa1.57□□□□□ -2.16
VRK1-205ENST00000555402 LAMA4Q16363 1823 aa1.57□□□□□ -2.16
VRK1-205ENST00000555402 ABCC2Q92887 1545 aa1.57□□□□□ -2.16
VRK1-205ENST00000555402 UQCR11O14957 56 aa1.57□□□□□ -2.16
VRK1-205ENST00000555402 ZNF137PP52743 207 aa1.57□□□□□ -2.16
VRK1-205ENST00000555402 MYH4Q9Y623 1939 aa1.57□□□□□ -2.16
VRK1-205ENST00000555402 DNMBPQ6XZF7 1577 aa1.56□□□□□ -2.16
VRK1-205ENST00000555402 DOCK11Q5JSL3 2073 aa1.56□□□□□ -2.16
VRK1-205ENST00000555402 ZNF815PA8K554 130 aa1.56□□□□□ -2.16
VRK1-205ENST00000555402 LY6G6CO95867 125 aa1.56□□□□□ -2.16
VRK1-205ENST00000555402 ALKAL2Q6UX46 152 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms