RNA–Protein interactions for RNA: ENST00000554639.5

MEG3-224, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,712 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-224ENST00000554639 LYRM7Q5U5X0 104 aa12.84□□□□□ -0.35
MEG3-224ENST00000554639 FAM104AQ969W3 186 aa12.84□□□□□ -0.35
MEG3-224ENST00000554639 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
MEG3-224ENST00000554639 WFDC10AQ9H1F0 79 aa12.83□□□□□ -0.36
MEG3-224ENST00000554639 CSDC2Q9Y534 153 aaKnown RBP12.83□□□□□ -0.36
MEG3-224ENST00000554639 FASNP49327 2511 aaKnown RBP12.82□□□□□ -0.36
MEG3-224ENST00000554639 CDIP1Q9H305 208 aa12.82□□□□□ -0.36
MEG3-224ENST00000554639 Q9UF83 564 aa12.82□□□□□ -0.36
MEG3-224ENST00000554639 WNK1Q9H4A3 2382 aa12.82□□□□□ -0.36
MEG3-224ENST00000554639 A0A0J9YXV3 536 aa12.82□□□□□ -0.36
MEG3-224ENST00000554639 SMIM9A6NGZ8 99 aa12.82□□□□□ -0.36
MEG3-224ENST00000554639 UBE2D3P61077 147 aa12.82□□□□□ -0.36
MEG3-224ENST00000554639 UBE2D2P62837 147 aa12.82□□□□□ -0.36
MEG3-224ENST00000554639 ERG28Q9UKR5 140 aa12.82□□□□□ -0.36
MEG3-224ENST00000554639 A0A0J9YY99 117 aa12.81□□□□□ -0.36
MEG3-224ENST00000554639 NF1P21359 2839 aa12.8□□□□□ -0.36
MEG3-224ENST00000554639 SPINK8P0C7L1 97 aa12.8□□□□□ -0.36
MEG3-224ENST00000554639 SLC25A29Q8N8R3 303 aa12.8□□□□□ -0.36
MEG3-224ENST00000554639 TRGV2A0A075B6R0 118 aa12.79□□□□□ -0.36
MEG3-224ENST00000554639 SRSF9Q13242 221 aaKnown RBP eCLIP12.79□□□□□ -0.36
MEG3-224ENST00000554639 KIR2DL5BQ8NHK3 375 aa12.79□□□□□ -0.36
MEG3-224ENST00000554639 PPDPFLQ8WWR9 84 aa12.79□□□□□ -0.36
MEG3-224ENST00000554639 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.79□□□□□ -0.36
MEG3-224ENST00000554639 IGKV2-29A2NJV5 120 aaPredicted RBP12.79□□□□□ -0.36
MEG3-224ENST00000554639 H7C423 109 aa12.79□□□□□ -0.36
MEG3-224ENST00000554639 TIRAPP58753 221 aa12.79□□□□□ -0.36
MEG3-224ENST00000554639 DGAT2L7PQ6IED9 249 aa12.79□□□□□ -0.36
MEG3-224ENST00000554639 CITED1Q99966 193 aa12.79□□□□□ -0.36
MEG3-224ENST00000554639 MTORP42345 2549 aa12.78□□□□□ -0.36
MEG3-224ENST00000554639 IGHV3-38A0A0C4DH36 116 aa12.78□□□□□ -0.36
MEG3-224ENST00000554639 TMEM262E9PQX1 116 aa12.78□□□□□ -0.36
MEG3-224ENST00000554639 M0QXV9 152 aa12.78□□□□□ -0.36
MEG3-224ENST00000554639 TSPEAR-AS2P59090 65 aa12.78□□□□□ -0.36
MEG3-224ENST00000554639 FAM19A3Q7Z5A8 133 aa12.78□□□□□ -0.36
MEG3-224ENST00000554639 GAGE7O76087 117 aa12.77□□□□□ -0.36
MEG3-224ENST00000554639 GAGE12FP0CL80 117 aa12.77□□□□□ -0.36
MEG3-224ENST00000554639 GAGE12GP0CL81 117 aa12.77□□□□□ -0.36
MEG3-224ENST00000554639 GAGE12IP0CL82 117 aa12.77□□□□□ -0.36
MEG3-224ENST00000554639 Q6ZUT4 128 aa12.77□□□□□ -0.36
MEG3-224ENST00000554639 SBSPONQ8IVN8 264 aa12.77□□□□□ -0.36
MEG3-224ENST00000554639 GCN1Q92616 2671 aaKnown RBP12.77□□□□□ -0.37
MEG3-224ENST00000554639 UBE2D1P51668 147 aa12.76□□□□□ -0.37
MEG3-224ENST00000554639 LINC00612Q8N6U2 182 aa12.76□□□□□ -0.37
MEG3-224ENST00000554639 TRBV20-1A0A075B6N2 111 aa12.76□□□□□ -0.37
MEG3-224ENST00000554639 IGLV5-45A0A087WSX0 123 aa12.76□□□□□ -0.37
MEG3-224ENST00000554639 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
MEG3-224ENST00000554639 CEMP1Q6PRD7 247 aaPredicted RBP12.76□□□□□ -0.37
MEG3-224ENST00000554639 TEN1Q86WV5 123 aa12.75□□□□□ -0.37
MEG3-224ENST00000554639 TRGV4A0A0C4DH28 118 aa12.74□□□□□ -0.37
MEG3-224ENST00000554639 GAGE12JA6NER3 117 aa12.74□□□□□ -0.37
MEG3-224ENST00000554639 IGHV3-30-3P0DP02 117 aa12.74□□□□□ -0.37
MEG3-224ENST00000554639 HERVK_113P63121 156 aa12.74□□□□□ -0.37
MEG3-224ENST00000554639 GAGE4Q13068 117 aa12.74□□□□□ -0.37
MEG3-224ENST00000554639 GAGE5Q13069 117 aa12.74□□□□□ -0.37
MEG3-224ENST00000554639 GAGE6Q13070 117 aa12.74□□□□□ -0.37
MEG3-224ENST00000554639 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
MEG3-224ENST00000554639 NTM-AS1Q6ZSK4 140 aa12.73□□□□□ -0.37
MEG3-224ENST00000554639 TMEM243Q9BU79 118 aa12.73□□□□□ -0.37
MEG3-224ENST00000554639 WIPF1O43516 503 aa12.72□□□□□ -0.37
MEG3-224ENST00000554639 IGHV3-30P01768 117 aa12.72□□□□□ -0.37
MEG3-224ENST00000554639 IGHV3-30-5P0DP03 117 aa12.72□□□□□ -0.37
MEG3-224ENST00000554639 FHL2Q14192 279 aa12.72□□□□□ -0.37
MEG3-224ENST00000554639 VSIG2Q96IQ7 327 aa12.72□□□□□ -0.37
MEG3-224ENST00000554639 APOC4P55056 127 aa12.71□□□□□ -0.37
MEG3-224ENST00000554639 WFDC9Q8NEX5 89 aa12.71□□□□□ -0.37
MEG3-224ENST00000554639 MT-ATP8P03928 68 aa12.71□□□□□ -0.38
MEG3-224ENST00000554639 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.71□□□□□ -0.38
MEG3-224ENST00000554639 TMEM101Q96IK0 257 aa12.71□□□□□ -0.38
MEG3-224ENST00000554639 PGPEP1Q9NXJ5 209 aa12.71□□□□□ -0.38
MEG3-224ENST00000554639 UBE2L6O14933 153 aa12.7□□□□□ -0.38
MEG3-224ENST00000554639 LINC00694P0DN24 101 aa12.7□□□□□ -0.38
MEG3-224ENST00000554639 XGP55808 180 aa12.7□□□□□ -0.38
MEG3-224ENST00000554639 ZFAND6Q6FIF0 208 aa12.7□□□□□ -0.38
MEG3-224ENST00000554639 X6R8D5 127 aa12.7□□□□□ -0.38
MEG3-224ENST00000554639 LYRM9A8MSI8 78 aa12.69□□□□□ -0.38
MEG3-224ENST00000554639 RNASE13Q5GAN3 156 aaKnown RBP12.69□□□□□ -0.38
MEG3-224ENST00000554639 CDC42SE2Q9NRR3 84 aa12.69□□□□□ -0.38
MEG3-224ENST00000554639 SETXQ7Z333 2677 aaKnown RBP12.69□□□□□ -0.38
MEG3-224ENST00000554639 CUBNO60494 3623 aa12.68□□□□□ -0.38
MEG3-224ENST00000554639 A0A0J9YXY3 114 aa12.68□□□□□ -0.38
MEG3-224ENST00000554639 RNF183Q96D59 192 aa12.68□□□□□ -0.38
MEG3-224ENST00000554639 OTOGQ6ZRI0 2925 aa12.68□□□□□ -0.38
MEG3-224ENST00000554639 TIMM17BO60830 172 aa12.68□□□□□ -0.38
MEG3-224ENST00000554639 CFAP161Q6P656 301 aa12.68□□□□□ -0.38
MEG3-224ENST00000554639 LINC01600Q96MT4 127 aa12.68□□□□□ -0.38
MEG3-224ENST00000554639 ANAPC13Q9BS18 74 aa12.68□□□□□ -0.38
MEG3-224ENST00000554639 HECTD1Q9ULT8 2610 aa12.67□□□□□ -0.38
MEG3-224ENST00000554639 Q6Q795 121 aa12.67□□□□□ -0.38
MEG3-224ENST00000554639 C10orf126Q8N4M7 172 aa12.67□□□□□ -0.38
MEG3-224ENST00000554639 CARD19Q96LW7 228 aa12.67□□□□□ -0.38
MEG3-224ENST00000554639 NDUFA12Q9UI09 145 aa12.67□□□□□ -0.38
MEG3-224ENST00000554639 LINC00242Q5T6M2 205 aa12.66□□□□□ -0.38
MEG3-224ENST00000554639 IGHV3-64A0A075B6Q5 118 aa12.65□□□□□ -0.38
MEG3-224ENST00000554639 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.65□□□□□ -0.38
MEG3-224ENST00000554639 SPANXDQ9BXN6 97 aa12.65□□□□□ -0.38
MEG3-224ENST00000554639 SPANXCQ9NY87 97 aa12.65□□□□□ -0.38
MEG3-224ENST00000554639 TRBV6-8A0A0A6YYG3 113 aa12.65□□□□□ -0.38
MEG3-224ENST00000554639 IGLV5-39A0A0G2JS06 123 aa12.65□□□□□ -0.38
MEG3-224ENST00000554639 CDKN2A-AS1Q9UH64 79 aa12.65□□□□□ -0.38
MEG3-224ENST00000554639 TRAV8-3A0A0A6YYJ7 113 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 304.9 ms