RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 UACAQ9BZF9 1416 aa0.84□□□□□ -2.27
SRP54-204ENST00000553923 GVQW2A0A096LPI5 108 aaPredicted RBP0.84□□□□□ -2.27
SRP54-204ENST00000553923 C10orf142B7Z368 130 aa0.84□□□□□ -2.27
SRP54-204ENST00000553923 LEPROTL1O95214 131 aa0.84□□□□□ -2.27
SRP54-204ENST00000553923 FXYD6P3P58550 94 aa0.84□□□□□ -2.27
SRP54-204ENST00000553923 C6orf52Q5T4I8 152 aa0.84□□□□□ -2.27
SRP54-204ENST00000553923 ALKAL2Q6UX46 152 aa0.84□□□□□ -2.27
SRP54-204ENST00000553923 MED12LQ86YW9 2145 aa0.84□□□□□ -2.27
SRP54-204ENST00000553923 AMELXQ99217 191 aa0.84□□□□□ -2.27
SRP54-204ENST00000553923 PXDNQ92626 1479 aa0.84□□□□□ -2.28
SRP54-204ENST00000553923 FREM1Q5H8C1 2179 aa0.84□□□□□ -2.28
SRP54-204ENST00000553923 UNC13CQ8NB66 2214 aa0.84□□□□□ -2.28
SRP54-204ENST00000553923 ZMYM4Q5VZL5 1548 aa0.84□□□□□ -2.28
SRP54-204ENST00000553923 PLIN4Q96Q06 1357 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 CASP8AP2Q9UKL3 1982 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 TOP2BQ02880 1626 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 A0A087WVE0 104 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 A0A096LNT2 108 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 F8WEM9 126 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 PRB1P04280 392 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 RPL37P61927 97 aaKnown RBP0.83□□□□□ -2.28
SRP54-204ENST00000553923 PSENENQ9NZ42 101 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 RABAC1Q9UI14 185 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 TOPAZ1Q8N9V7 1692 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 ICE1Q9Y2F5 2266 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 ANKRD26Q9UPS8 1709 aa0.83□□□□□ -2.28
SRP54-204ENST00000553923 ABCA3Q99758 1704 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 PEAK1Q9H792 1746 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 MARF1Q9Y4F3 1742 aaKnown RBP0.82□□□□□ -2.28
SRP54-204ENST00000553923 KANTRA0A1W2PQU2 76 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 D6R8Y8 96 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 ARMS2P0C7Q2 107 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 GNGT1P63211 74 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 WFDC2Q14508 124 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 NMSQ5H8A3 153 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 Q6JHZ5 121 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 MUSTN1Q8IVN3 82 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 ST20Q9HBF5 79 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 TET1Q8NFU7 2136 aa0.82□□□□□ -2.28
SRP54-204ENST00000553923 ARFGEF3Q5TH69 2177 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 MED14O60244 1454 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 ATP10BO94823 1461 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 ARHGAP35Q9NRY4 1499 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 HMGXB3Q12766 1538 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 EHBP1L1Q8N3D4 1523 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 ARHGEF12Q9NZN5 1544 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 PATJQ8NI35 1801 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 PHIPQ8WWQ0 1821 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 SNRPFP62306 86 aaKnown RBP0.81□□□□□ -2.28
SRP54-204ENST00000553923 UBE2DNLQ8IWF7 75 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 DEFB107AQ8IZN7 70 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 DOCK1Q14185 1865 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 EXPH5Q8NEV8 1989 aa0.81□□□□□ -2.28
SRP54-204ENST00000553923 NRXN1Q9ULB1 1477 aa0.8□□□□□ -2.28
SRP54-204ENST00000553923 ABCC3O15438 1527 aa0.8□□□□□ -2.28
SRP54-204ENST00000553923 SHROOM2Q13796 1616 aa0.8□□□□□ -2.28
SRP54-204ENST00000553923 BCE1O60756 84 aa0.8□□□□□ -2.28
SRP54-204ENST00000553923 S100A3P33764 101 aa0.8□□□□□ -2.28
SRP54-204ENST00000553923 KRTAP21-3Q3LHN1 58 aa0.8□□□□□ -2.28
SRP54-204ENST00000553923 TET3O43151 1660 aa0.8□□□□□ -2.28
SRP54-204ENST00000553923 KIAA1551Q9HCM1 1747 aa0.8□□□□□ -2.28
SRP54-204ENST00000553923 AFDNP55196 1824 aaKnown RBP0.8□□□□□ -2.28
SRP54-204ENST00000553923 CITO14578 2027 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 CHD3Q12873 2000 aaKnown RBP0.79□□□□□ -2.28
SRP54-204ENST00000553923 RTTNQ86VV8 2226 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 IQCF6A8MYZ5 107 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 G3V318 75 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 H3BUT2 72 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 PIN1P1O15428 100 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 HMGN2P05204 90 aaKnown RBP0.79□□□□□ -2.28
SRP54-204ENST00000553923 ACYP1P07311 99 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 SPINK9Q5DT21 86 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 C10orf113Q5VZT2 155 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 LINC00643Q86TS7 51 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 TMEM263Q8WUH6 116 aaKnown RBP0.79□□□□□ -2.28
SRP54-204ENST00000553923 LINC01600Q96MT4 127 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 ARFGEF1Q9Y6D6 1849 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 EPRSP07814 1512 aaKnown RBP0.79□□□□□ -2.28
SRP54-204ENST00000553923 CDK13Q14004 1512 aaKnown RBP0.79□□□□□ -2.28
SRP54-204ENST00000553923 UNC13BO14795 1591 aa0.79□□□□□ -2.28
SRP54-204ENST00000553923 PRDM2Q13029 1718 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 MON2Q7Z3U7 1717 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 MYH8P13535 1937 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 MYO18AQ92614 2054 aaKnown RBP0.78□□□□□ -2.28
SRP54-204ENST00000553923 H0Y9P7 68 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 HMGN3Q15651 99 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 SSBP3-AS1Q7Z2R9 100 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 C6orf201Q7Z4U5 140 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 LINC00472Q9H8W2 130 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 PROK2Q9HC23 129 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 CEP162Q5TB80 1403 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 POLA1P09884 1462 aaPredicted RBP0.78□□□□□ -2.28
SRP54-204ENST00000553923 IQSEC2Q5JU85 1478 aa0.78□□□□□ -2.28
SRP54-204ENST00000553923 CHD1O14646 1710 aa0.78□□□□□ -2.29
SRP54-204ENST00000553923 NINQ8N4C6 2090 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 ZGRF1Q86YA3 2104 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 CACNA1GO43497 2377 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 TRBV6-1A0A0K0K1D8 114 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 MYMXA0A1B0GTQ4 84 aa0.77□□□□□ -2.29
SRP54-204ENST00000553923 K7EIL1 84 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms