RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 GEMIN7Q9H840 131 aaKnown RBP10.51□□□□□ -0.73
ACTN1-211ENST00000553882 ITPR2Q14571 2701 aa10.5□□□□□ -0.73
ACTN1-211ENST00000553882 TINCRA0A1B0GVN0 87 aa10.5□□□□□ -0.73
ACTN1-211ENST00000553882 C1orf158Q8N1D5 194 aa10.5□□□□□ -0.73
ACTN1-211ENST00000553882 LRRC75A-AS1Q8N1F1 130 aa10.5□□□□□ -0.73
ACTN1-211ENST00000553882 BEAN1Q3B7T3 259 aa10.5□□□□□ -0.73
ACTN1-211ENST00000553882 HIST2H2BCQ6DN03 193 aa10.5□□□□□ -0.73
ACTN1-211ENST00000553882 CDKN2A-AS1Q9UH64 79 aa10.5□□□□□ -0.73
ACTN1-211ENST00000553882 A0A0B4J2C4 111 aa10.49□□□□□ -0.73
ACTN1-211ENST00000553882 RS1O15537 224 aa10.49□□□□□ -0.73
ACTN1-211ENST00000553882 CRYBA4P53673 196 aa10.49□□□□□ -0.73
ACTN1-211ENST00000553882 DGAT2L7PQ6IED9 249 aa10.49□□□□□ -0.73
ACTN1-211ENST00000553882 ESM1Q9NQ30 184 aa10.49□□□□□ -0.73
ACTN1-211ENST00000553882 CCL24O00175 119 aa10.48□□□□□ -0.73
ACTN1-211ENST00000553882 TEN1Q86WV5 123 aa10.48□□□□□ -0.73
ACTN1-211ENST00000553882 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-211ENST00000553882 DAND5Q8N907 189 aa10.48□□□□□ -0.73
ACTN1-211ENST00000553882 C9JAW5 83 aa10.48□□□□□ -0.73
ACTN1-211ENST00000553882 NDUFA7O95182 113 aa10.48□□□□□ -0.73
ACTN1-211ENST00000553882 FHL3Q13643 280 aa10.48□□□□□ -0.73
ACTN1-211ENST00000553882 Q6ZTI0 123 aa10.48□□□□□ -0.73
ACTN1-211ENST00000553882 ATP6V0E2Q8NHE4 81 aa10.48□□□□□ -0.73
ACTN1-211ENST00000553882 CARD19Q96LW7 228 aa10.48□□□□□ -0.73
ACTN1-211ENST00000553882 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-211ENST00000553882 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
ACTN1-211ENST00000553882 DNAJC30Q96LL9 226 aa10.47□□□□□ -0.73
ACTN1-211ENST00000553882 LINC00694P0DN24 101 aa10.47□□□□□ -0.73
ACTN1-211ENST00000553882 WFDC10AQ9H1F0 79 aa10.46□□□□□ -0.73
ACTN1-211ENST00000553882 SLC25A20O43772 301 aa10.46□□□□□ -0.74
ACTN1-211ENST00000553882 COX6A2Q02221 97 aa10.46□□□□□ -0.74
ACTN1-211ENST00000553882 PPDPFLQ8WWR9 84 aa10.45□□□□□ -0.74
ACTN1-211ENST00000553882 TRIAP1O43715 76 aa10.44□□□□□ -0.74
ACTN1-211ENST00000553882 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-211ENST00000553882 CDIP1Q9H305 208 aa10.44□□□□□ -0.74
ACTN1-211ENST00000553882 A0A0U1RRA0 63 aa10.44□□□□□ -0.74
ACTN1-211ENST00000553882 MIAQ16674 131 aa10.44□□□□□ -0.74
ACTN1-211ENST00000553882 ZFAND6Q6FIF0 208 aa10.44□□□□□ -0.74
ACTN1-211ENST00000553882 SBSPONQ8IVN8 264 aa10.44□□□□□ -0.74
ACTN1-211ENST00000553882 TMEM86BQ8N661 226 aa10.44□□□□□ -0.74
ACTN1-211ENST00000553882 NOP10Q9NPE3 64 aaKnown RBP10.44□□□□□ -0.74
ACTN1-211ENST00000553882 TRAV13-1A0A0B4J241 112 aa10.43□□□□□ -0.74
ACTN1-211ENST00000553882 TMEM101Q96IK0 257 aa10.43□□□□□ -0.74
ACTN1-211ENST00000553882 FN1P02751 2386 aaKnown RBP10.43□□□□□ -0.74
ACTN1-211ENST00000553882 GAGE12JA6NER3 117 aa10.43□□□□□ -0.74
ACTN1-211ENST00000553882 GAGE4Q13068 117 aa10.43□□□□□ -0.74
ACTN1-211ENST00000553882 GAGE5Q13069 117 aa10.43□□□□□ -0.74
ACTN1-211ENST00000553882 SPANXDQ9BXN6 97 aa10.42□□□□□ -0.74
ACTN1-211ENST00000553882 SPANXCQ9NY87 97 aa10.42□□□□□ -0.74
ACTN1-211ENST00000553882 PDZD2O15018 2839 aa10.42□□□□□ -0.74
ACTN1-211ENST00000553882 TRAV25A0A0B4J276 109 aa10.42□□□□□ -0.74
ACTN1-211ENST00000553882 K7EQD1 137 aa10.42□□□□□ -0.74
ACTN1-211ENST00000553882 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
ACTN1-211ENST00000553882 NTM-AS1Q6ZSK4 140 aa10.42□□□□□ -0.74
ACTN1-211ENST00000553882 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
ACTN1-211ENST00000553882 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
ACTN1-211ENST00000553882 RPL35AP18077 110 aaKnown RBP10.41□□□□□ -0.74
ACTN1-211ENST00000553882 LINC00242Q5T6M2 205 aa10.41□□□□□ -0.74
ACTN1-211ENST00000553882 ATXN8Q156A1 80 aa10.4□□□□□ -0.74
ACTN1-211ENST00000553882 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
ACTN1-211ENST00000553882 Q9H8V8 135 aa10.4□□□□□ -0.74
ACTN1-211ENST00000553882 GCN1Q92616 2671 aaKnown RBP10.4□□□□□ -0.74
ACTN1-211ENST00000553882 MT-ATP8P03928 68 aa10.4□□□□□ -0.74
ACTN1-211ENST00000553882 ICOSQ9Y6W8 199 aa10.4□□□□□ -0.74
ACTN1-211ENST00000553882 PLA2G2AP14555 144 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 XGP55808 180 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 TIRAPP58753 221 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 HELZ2Q9BYK8 2649 aaKnown RBP10.39□□□□□ -0.75
ACTN1-211ENST00000553882 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 TRBV30A0A0K0K1B3 111 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 GAGE7O76087 117 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 GIG44P09565 113 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-211ENST00000553882 GAGE12FP0CL80 117 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 GAGE12GP0CL81 117 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 GAGE12IP0CL82 117 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 SCGB1A1P11684 91 aa10.39□□□□□ -0.75
ACTN1-211ENST00000553882 LOC100131303A0A0U1RQF7 123 aa10.38□□□□□ -0.75
ACTN1-211ENST00000553882 NDUFA1O15239 70 aa10.38□□□□□ -0.75
ACTN1-211ENST00000553882 HERVK_113P63121 156 aa10.38□□□□□ -0.75
ACTN1-211ENST00000553882 TRGV2A0A075B6R0 118 aa10.38□□□□□ -0.75
ACTN1-211ENST00000553882 NTN5Q8WTR8 489 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-211ENST00000553882 CLEC2BQ92478 149 aa10.38□□□□□ -0.75
ACTN1-211ENST00000553882 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
ACTN1-211ENST00000553882 RPL13AP40429 203 aaKnown RBP10.37□□□□□ -0.75
ACTN1-211ENST00000553882 DAZ2Q13117 558 aaKnown RBP10.37□□□□□ -0.75
ACTN1-211ENST00000553882 DAZ4Q86SG3 579 aaKnown RBP10.37□□□□□ -0.75
ACTN1-211ENST00000553882 DAZ3Q9NR90 486 aaKnown RBP10.37□□□□□ -0.75
ACTN1-211ENST00000553882 TRBV10-1A0A0K0K1A3 114 aa10.37□□□□□ -0.75
ACTN1-211ENST00000553882 SMIM1B2RUZ4 78 aa10.37□□□□□ -0.75
ACTN1-211ENST00000553882 YAE1D1Q9NRH1 226 aa10.37□□□□□ -0.75
ACTN1-211ENST00000553882 ANK3Q12955 4377 aaKnown RBP10.36□□□□□ -0.75
ACTN1-211ENST00000553882 TEX49A0A1B0GTD5 131 aa10.36□□□□□ -0.75
ACTN1-211ENST00000553882 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
ACTN1-211ENST00000553882 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
ACTN1-211ENST00000553882 PLAC8L1A1L4L8 177 aa10.35□□□□□ -0.75
ACTN1-211ENST00000553882 CDC42SE2Q9NRR3 84 aa10.35□□□□□ -0.75
ACTN1-211ENST00000553882 IGKV3OR2-268A0A0C4DH90 116 aa10.35□□□□□ -0.75
ACTN1-211ENST00000553882 UBE2L6O14933 153 aa10.35□□□□□ -0.75
ACTN1-211ENST00000553882 COX6CP09669 75 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms