RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 DAZ4Q86SG3 579 aaKnown RBP3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 TMEM86BQ8N661 226 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 ZNF625Q96I27 306 aaPredicted RBP3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 DUX5Q96PT3 197 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 OVOL2Q9BRP0 275 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 MAP6D1Q9H9H5 199 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 DAZ3Q9NR90 486 aaKnown RBP3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 FAM30AQ9NZY2 134 aa3.79□□□□□ -1.8
TMEM55B-204ENST00000553602 MYO18BQ8IUG5 2567 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 SPTAN1Q13813 2472 aaKnown RBP3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 IGHV3-64A0A075B6Q5 118 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 TRAV4A0A0B4J268 109 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 TEX49A0A1B0GTD5 131 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 KNCNA6PVL3 124 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 TGFAP01135 160 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 IGKV3-20P01619 116 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 ATP5G1P05496 136 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 NHLRC4P0CG21 123 aaPredicted RBP3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 C10orf99Q6UWK7 81 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 DAND5Q8N907 189 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 LINC00308Q8TCZ7 52 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 FAM110AQ9BQ89 295 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 CDKN2A-AS1Q9UH64 79 aa3.78□□□□□ -1.8
TMEM55B-204ENST00000553602 SMG1Q96Q15 3661 aaKnown RBP3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 ATMQ13315 3056 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 ITPR1Q14643 2758 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 IGHV3OR16-12A0A075B7B8 117 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 SMIM1B2RUZ4 78 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 F5H768 121 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 H7C2G1 150 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 PRSS2P07478 247 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 CMC4P56277 68 aaPredicted RBP3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 RPL36AP83881 106 aaKnown RBP3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 DEFB114Q30KQ6 69 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 LINC00242Q5T6M2 205 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 Q6ZSN1 163 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 LRRC75A-AS1Q8N1F1 130 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 C15orf53Q8NAA6 179 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 RPL36ALQ969Q0 106 aaKnown RBP3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 CITED2Q99967 270 aaPredicted RBP3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 ZNF462Q96JM2 2506 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 NAV2Q8IVL1 2488 aa3.77□□□□□ -1.81
TMEM55B-204ENST00000553602 BSNQ9UPA5 3926 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 IGKV2-29A2NJV5 120 aaPredicted RBP3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 GAGE12JA6NER3 117 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 K7EQD1 137 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 GAGE7O76087 117 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 GAGE12FP0CL80 117 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 GAGE12GP0CL81 117 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 GAGE12IP0CL82 117 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 INAFM2P0DMQ5 153 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 IGHV4-31P0DP07 118 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 SLURP1P55000 103 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 PROK1P58294 105 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 GAGE4Q13068 117 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 TTC32Q5I0X7 151 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 DGAT2L7PQ6IED9 249 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 CEMP1Q6PRD7 247 aaPredicted RBP3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 DYNLRB2Q8TF09 96 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 DEFB104AQ8WTQ1 72 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 LINC01587Q99440 93 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 KRTAP9-2Q9BYQ4 174 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 Q9H8V8 135 aa3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 BEX4Q9NWD9 120 aaPredicted RBP3.76□□□□□ -1.81
TMEM55B-204ENST00000553602 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.76□□□□□ -1.811e-7■■■■□ 20.9
TMEM55B-204ENST00000553602 NACAE9PAV3 2078 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 GCN1Q92616 2671 aaKnown RBP3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 IGHV3-73A0A0B4J1V6 119 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 TRAV13-2A0A0B4J235 113 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 KALRNO60229 2985 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 CRLF1O75462 422 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 CXCL5P42830 114 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 RPL28P46779 137 aaKnown RBP3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 ODF3L2Q3SX64 289 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 LINC00643Q86TS7 51 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 CLEC2BQ92478 149 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 CDC42SE2Q9NRR3 84 aa3.75□□□□□ -1.81
TMEM55B-204ENST00000553602 LRRK2Q5S007 2527 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 TRBV6-4A0A1B0GX49 114 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 LINC00694P0DN24 101 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 PRRC2AP48634 2157 aaKnown RBP3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 RNASE13Q5GAN3 156 aaKnown RBP3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 HIST2H2BCQ6DN03 193 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 HIST2H2BDQ6DRA6 164 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 NTM-AS1Q6ZSK4 140 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 PRIMA1Q86XR5 153 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 C1orf158Q8N1D5 194 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 C16orf74Q96GX8 76 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 TMEM243Q9BU79 118 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 MED13LQ71F56 2210 aa3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 FLNBO75369 2602 aaKnown RBP3.74□□□□□ -1.81
TMEM55B-204ENST00000553602 DCHS2Q6V1P9 2916 aa3.73□□□□□ -1.81
TMEM55B-204ENST00000553602 IBA57-AS1B1ANH7 110 aa3.73□□□□□ -1.81
TMEM55B-204ENST00000553602 CRPP02741 224 aa3.73□□□□□ -1.81
TMEM55B-204ENST00000553602 COX6A2Q02221 97 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms