RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 A8MZ25 164 aa17.1■□□□□ 0.33
NPAS3-211ENST00000551634 DEFB136Q30KP8 78 aa17.1■□□□□ 0.33
NPAS3-211ENST00000551634 NDUFA1O15239 70 aa17.09■□□□□ 0.33
NPAS3-211ENST00000551634 SVIPQ8NHG7 77 aa17.09■□□□□ 0.33
NPAS3-211ENST00000551634 UBE2WQ96B02 151 aa17.09■□□□□ 0.33
NPAS3-211ENST00000551634 CREBBPQ92793 2442 aa17.09■□□□□ 0.33
NPAS3-211ENST00000551634 INSP01308 110 aa17.08■□□□□ 0.33
NPAS3-211ENST00000551634 C2orf82Q6UX34 121 aa17.08■□□□□ 0.33
NPAS3-211ENST00000551634 C18orf65Q6ZTR6 163 aa17.08■□□□□ 0.33
NPAS3-211ENST00000551634 CDKN2A-AS1Q9UH64 79 aa17.08■□□□□ 0.33
NPAS3-211ENST00000551634 TEX49A0A1B0GTD5 131 aa17.08■□□□□ 0.32
NPAS3-211ENST00000551634 Q8N2B8 174 aa17.08■□□□□ 0.32
NPAS3-211ENST00000551634 H7C423 109 aa17.07■□□□□ 0.32
NPAS3-211ENST00000551634 IGHV3-38A0A0C4DH36 116 aa17.06■□□□□ 0.32
NPAS3-211ENST00000551634 SNCGO76070 127 aa17.06■□□□□ 0.32
NPAS3-211ENST00000551634 TRAV8-4A0A0B4J246 113 aa17.06■□□□□ 0.32
NPAS3-211ENST00000551634 LST1O00453 97 aa17.06■□□□□ 0.32
NPAS3-211ENST00000551634 CIRBPQ14011 172 aaKnown RBP17.06■□□□□ 0.32
NPAS3-211ENST00000551634 DGAT2L7PQ6IED9 249 aa17.06■□□□□ 0.32
NPAS3-211ENST00000551634 TMEM101Q96IK0 257 aa17.06■□□□□ 0.32
NPAS3-211ENST00000551634 CLUHP3Q96NS8 147 aa17.06■□□□□ 0.32
NPAS3-211ENST00000551634 C4orf3Q8WVX3 66 aa17.05■□□□□ 0.32
NPAS3-211ENST00000551634 MAPK1IP1LQ8NDC0 245 aa17.05■□□□□ 0.32
NPAS3-211ENST00000551634 DYNLRB2Q8TF09 96 aa17.05■□□□□ 0.32
NPAS3-211ENST00000551634 ANAPC13Q9BS18 74 aa17.05■□□□□ 0.32
NPAS3-211ENST00000551634 NPC2P61916 151 aa17.04■□□□□ 0.32
NPAS3-211ENST00000551634 HERVK_113P63121 156 aa17.04■□□□□ 0.32
NPAS3-211ENST00000551634 IGLV5-39A0A0G2JS06 123 aa17.03■□□□□ 0.32
NPAS3-211ENST00000551634 GAGE2BQ13066 116 aa17.03■□□□□ 0.32
NPAS3-211ENST00000551634 GAGE2EQ4V326 116 aa17.03■□□□□ 0.32
NPAS3-211ENST00000551634 Q6Q795 121 aa17.03■□□□□ 0.32
NPAS3-211ENST00000551634 GAGE2DQ9UEU5 116 aa17.03■□□□□ 0.32
NPAS3-211ENST00000551634 TEX15Q9BXT5 2789 aa17.03■□□□□ 0.32
NPAS3-211ENST00000551634 APCP25054 2843 aa17.03■□□□□ 0.32
NPAS3-211ENST00000551634 DEFB114Q30KQ6 69 aa17.03■□□□□ 0.32
NPAS3-211ENST00000551634 FAM19A3Q7Z5A8 133 aa17.03■□□□□ 0.32
NPAS3-211ENST00000551634 UNC79Q9P2D8 2635 aa17.02■□□□□ 0.32
NPAS3-211ENST00000551634 Q6ZSV7 163 aa17.02■□□□□ 0.32
NPAS3-211ENST00000551634 IGHV3OR16-12A0A075B7B8 117 aa17.01■□□□□ 0.31
NPAS3-211ENST00000551634 IGHV4-31P0DP07 118 aa17.01■□□□□ 0.31
NPAS3-211ENST00000551634 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.01■□□□□ 0.31
NPAS3-211ENST00000551634 CLEC2BQ92478 149 aa17.01■□□□□ 0.31
NPAS3-211ENST00000551634 NAV2Q8IVL1 2488 aa17.01■□□□□ 0.31
NPAS3-211ENST00000551634 COPS9Q8WXC6 57 aa17■□□□□ 0.31
NPAS3-211ENST00000551634 ZNF469Q96JG9 3925 aaPredicted RBP17■□□□□ 0.31
NPAS3-211ENST00000551634 DEFB121Q5J5C9 76 aa16.99■□□□□ 0.31
NPAS3-211ENST00000551634 CSDC2Q9Y534 153 aaKnown RBP16.99■□□□□ 0.31
NPAS3-211ENST00000551634 COX6A2Q02221 97 aa16.99■□□□□ 0.31
NPAS3-211ENST00000551634 TRAV4A0A0B4J268 109 aa16.98■□□□□ 0.31
NPAS3-211ENST00000551634 MRPL23Q16540 153 aaKnown RBP16.98■□□□□ 0.31
NPAS3-211ENST00000551634 LINC00242Q5T6M2 205 aa16.98■□□□□ 0.31
NPAS3-211ENST00000551634 LINC00308Q8TCZ7 52 aa16.98■□□□□ 0.31
NPAS3-211ENST00000551634 FAM240AA0A1B0GVK7 77 aa16.98■□□□□ 0.31
NPAS3-211ENST00000551634 DAND5Q8N907 189 aa16.98■□□□□ 0.31
NPAS3-211ENST00000551634 CITED2Q99967 270 aaPredicted RBP16.98■□□□□ 0.31
NPAS3-211ENST00000551634 Q9H8V8 135 aa16.98■□□□□ 0.31
NPAS3-211ENST00000551634 CRLF1O75462 422 aa16.97■□□□□ 0.31
NPAS3-211ENST00000551634 IL17DQ8TAD2 202 aa16.97■□□□□ 0.31
NPAS3-211ENST00000551634 TRBV10-1A0A0K0K1A3 114 aa16.96■□□□□ 0.31
NPAS3-211ENST00000551634 C15orf53Q8NAA6 179 aa16.95■□□□□ 0.3
NPAS3-211ENST00000551634 ZANQ9Y493 2812 aa16.95■□□□□ 0.3
NPAS3-211ENST00000551634 XCL2Q9UBD3 114 aa16.95■□□□□ 0.3
NPAS3-211ENST00000551634 TRAV25A0A0B4J276 109 aa16.94■□□□□ 0.3
NPAS3-211ENST00000551634 RPL36AP83881 106 aaKnown RBP16.94■□□□□ 0.3
NPAS3-211ENST00000551634 KHDC1LQ5JSQ8 128 aa16.94■□□□□ 0.3
NPAS3-211ENST00000551634 RPL36ALQ969Q0 106 aaKnown RBP16.94■□□□□ 0.3
NPAS3-211ENST00000551634 PLA2G2AP14555 144 aa16.93■□□□□ 0.3
NPAS3-211ENST00000551634 NDUFV3P56181 108 aaKnown RBP16.93■□□□□ 0.3
NPAS3-211ENST00000551634 DAZ2Q13117 558 aaKnown RBP16.93■□□□□ 0.3
NPAS3-211ENST00000551634 DAZ4Q86SG3 579 aaKnown RBP16.93■□□□□ 0.3
NPAS3-211ENST00000551634 DAZ3Q9NR90 486 aaKnown RBP16.93■□□□□ 0.3
NPAS3-211ENST00000551634 SMIM1B2RUZ4 78 aa16.93■□□□□ 0.3
NPAS3-211ENST00000551634 C1orf158Q8N1D5 194 aa16.93■□□□□ 0.3
NPAS3-211ENST00000551634 ANKRD17O75179 2603 aaKnown RBP16.93■□□□□ 0.3
NPAS3-211ENST00000551634 NHLRC4P0CG21 123 aaPredicted RBP16.92■□□□□ 0.3
NPAS3-211ENST00000551634 ODF3L2Q3SX64 289 aa16.92■□□□□ 0.3
NPAS3-211ENST00000551634 STHQ8IWL8 128 aa16.92■□□□□ 0.3
NPAS3-211ENST00000551634 TRGV1A0A0A0MS02 117 aa16.91■□□□□ 0.3
NPAS3-211ENST00000551634 LINC00694P0DN24 101 aa16.91■□□□□ 0.3
NPAS3-211ENST00000551634 TTC32Q5I0X7 151 aa16.91■□□□□ 0.3
NPAS3-211ENST00000551634 PPDPFQ9H3Y8 114 aa16.91■□□□□ 0.3
NPAS3-211ENST00000551634 K7EQD1 137 aa16.91■□□□□ 0.3
NPAS3-211ENST00000551634 GAGE5Q13069 117 aa16.91■□□□□ 0.3
NPAS3-211ENST00000551634 GAGE6Q13070 117 aa16.91■□□□□ 0.3
NPAS3-211ENST00000551634 COX7A2LO14548 114 aa16.9■□□□□ 0.3
NPAS3-211ENST00000551634 CR1P17927 2039 aa16.89■□□□□ 0.29
NPAS3-211ENST00000551634 HERV-K104P63124 156 aa16.89■□□□□ 0.29
NPAS3-211ENST00000551634 SHISA2Q6UWI4 295 aa16.89■□□□□ 0.29
NPAS3-211ENST00000551634 ZNF625Q96I27 306 aaPredicted RBP16.89■□□□□ 0.29
NPAS3-211ENST00000551634 NTM-AS1Q6ZSK4 140 aa16.88■□□□□ 0.29
NPAS3-211ENST00000551634 CDC42SE2Q9NRR3 84 aa16.88■□□□□ 0.29
NPAS3-211ENST00000551634 MXRA5Q9NR99 2828 aa16.87■□□□□ 0.29
NPAS3-211ENST00000551634 TRAV13-1A0A0B4J241 112 aa16.87■□□□□ 0.29
NPAS3-211ENST00000551634 PRIMA1Q86XR5 153 aa16.87■□□□□ 0.29
NPAS3-211ENST00000551634 MAST4O15021 2626 aa16.87■□□□□ 0.29
NPAS3-211ENST00000551634 F5H768 121 aa16.86■□□□□ 0.29
NPAS3-211ENST00000551634 SOSTDC1Q6X4U4 206 aa16.86■□□□□ 0.29
NPAS3-211ENST00000551634 TLN2Q9Y4G6 2542 aa16.85■□□□□ 0.29
NPAS3-211ENST00000551634 MEIG1Q5JSS6 88 aa16.85■□□□□ 0.29
NPAS3-211ENST00000551634 NDUFA7O95182 113 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms