RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 LGALS3P17931 250 aaKnown RBP8.1□□□□□ -1.11
RAB5C-208ENST00000551338 OR5A1Q8NGJ0 315 aa8.1□□□□□ -1.11
RAB5C-208ENST00000551338 TMEM243Q9BU79 118 aa8.1□□□□□ -1.11
RAB5C-208ENST00000551338 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
RAB5C-208ENST00000551338 NOTCH2Q04721 2471 aa8.09□□□□□ -1.11
RAB5C-208ENST00000551338 IGLV5-45A0A087WSX0 123 aa8.09□□□□□ -1.11
RAB5C-208ENST00000551338 IGHV4-28A0A0C4DH34 117 aa8.09□□□□□ -1.11
RAB5C-208ENST00000551338 IGHV4-30-4P0DP06 118 aa8.09□□□□□ -1.11
RAB5C-208ENST00000551338 FAM222AQ5U5X8 452 aa8.09□□□□□ -1.11
RAB5C-208ENST00000551338 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
RAB5C-208ENST00000551338 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
RAB5C-208ENST00000551338 HIST1H4GQ99525 98 aa8.09□□□□□ -1.11
RAB5C-208ENST00000551338 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.11
RAB5C-208ENST00000551338 SETD2Q9BYW2 2564 aaPredicted RBP8.09□□□□□ -1.12
RAB5C-208ENST00000551338 TRAV8-3A0A0A6YYJ7 113 aa8.08□□□□□ -1.12
RAB5C-208ENST00000551338 C9orf118A6NHY6 69 aa8.08□□□□□ -1.12
RAB5C-208ENST00000551338 K7ERJ3 54 aa8.08□□□□□ -1.12
RAB5C-208ENST00000551338 TIRAPP58753 221 aa8.08□□□□□ -1.12
RAB5C-208ENST00000551338 SCGB1D4Q6XE38 83 aa8.08□□□□□ -1.12
RAB5C-208ENST00000551338 Q8NAQ8 132 aa8.08□□□□□ -1.12
RAB5C-208ENST00000551338 JMJD1CQ15652 2540 aa8.08□□□□□ -1.12
RAB5C-208ENST00000551338 IGHV1-58A0A0C4DH39 117 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 H7C423 109 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 IGHV3-30-3P0DP02 117 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 PTTG1IPP53801 180 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 SMAGPQ0VAQ4 97 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 PRIMA1Q86XR5 153 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 RAB37Q96AX2 223 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 RNF183Q96D59 192 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 CDC42SE2Q9NRR3 84 aa8.07□□□□□ -1.12
RAB5C-208ENST00000551338 NHP2Q9NX24 153 aaKnown RBP8.07□□□□□ -1.12
RAB5C-208ENST00000551338 H3BUT2 72 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 DEFB4AO15263 64 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 CCL25O15444 150 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 SPINK8P0C7L1 97 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 MIFP14174 115 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 GYPEP15421 78 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 KRTAP10-11P60412 298 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 UBE2V1Q13404 147 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 VAMP3Q15836 100 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 LINC00242Q5T6M2 205 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 SHISA2Q6UWI4 295 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 NAA38Q9BRA0 125 aaKnown RBP8.06□□□□□ -1.12
RAB5C-208ENST00000551338 GEMIN7Q9H840 131 aaKnown RBP8.06□□□□□ -1.12
RAB5C-208ENST00000551338 CELA1Q9UNI1 258 aa8.06□□□□□ -1.12
RAB5C-208ENST00000551338 TRBV6-8A0A0A6YYG3 113 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 A0A1B0GWB2 263 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 UBE2L6O14933 153 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 COX6A2Q02221 97 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 EGFEM1PQ0D2K5 195 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 GAGE6Q13070 117 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 C12orf74Q32Q52 190 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 AMMECR1LQ6DCA0 310 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 C10orf126Q8N4M7 172 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 C3orf56Q8N813 242 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 VSIG2Q96IQ7 327 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 CDKN2A-AS1Q9UH64 79 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 PRO0255Q9UI72 69 aa8.05□□□□□ -1.12
RAB5C-208ENST00000551338 HERVK_113P63121 156 aa8.04□□□□□ -1.12
RAB5C-208ENST00000551338 ATP6V0E2Q8NHE4 81 aa8.04□□□□□ -1.12
RAB5C-208ENST00000551338 A0A0J9YXY3 114 aa8.03□□□□□ -1.12
RAB5C-208ENST00000551338 A8MZ25 164 aa8.03□□□□□ -1.12
RAB5C-208ENST00000551338 IGHV3-30P01768 117 aa8.03□□□□□ -1.12
RAB5C-208ENST00000551338 IGHV3-30-5P0DP03 117 aa8.03□□□□□ -1.12
RAB5C-208ENST00000551338 DAD1P61803 113 aa8.03□□□□□ -1.12
RAB5C-208ENST00000551338 SRSF9Q13242 221 aaKnown RBP eCLIP8.03□□□□□ -1.12
RAB5C-208ENST00000551338 TMEM101Q96IK0 257 aa8.03□□□□□ -1.12
RAB5C-208ENST00000551338 IGLV4-60A0A075B6I1 120 aa8.02□□□□□ -1.13
RAB5C-208ENST00000551338 TRAV13-1A0A0B4J241 112 aa8.02□□□□□ -1.13
RAB5C-208ENST00000551338 ZFAND6Q6FIF0 208 aa8.02□□□□□ -1.13
RAB5C-208ENST00000551338 IGLV5-39A0A0G2JS06 123 aa8.01□□□□□ -1.13
RAB5C-208ENST00000551338 A0A1W2PPM0 123 aa8.01□□□□□ -1.13
RAB5C-208ENST00000551338 SMIM1B2RUZ4 78 aa8.01□□□□□ -1.13
RAB5C-208ENST00000551338 IGLL5B9A064 214 aa8.01□□□□□ -1.13
RAB5C-208ENST00000551338 PAX4O43316 350 aa8.01□□□□□ -1.13
RAB5C-208ENST00000551338 LITAFQ99732 161 aa8.01□□□□□ -1.13
RAB5C-208ENST00000551338 CHCHD5Q9BSY4 110 aa8.01□□□□□ -1.13
RAB5C-208ENST00000551338 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
RAB5C-208ENST00000551338 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
RAB5C-208ENST00000551338 A6NJY4 79 aa8□□□□□ -1.13
RAB5C-208ENST00000551338 F5H768 121 aa8□□□□□ -1.13
RAB5C-208ENST00000551338 K7EP34 96 aa8□□□□□ -1.13
RAB5C-208ENST00000551338 ATP5G1P05496 136 aa8□□□□□ -1.13
RAB5C-208ENST00000551338 SPART-AS1P0CW21 52 aa8□□□□□ -1.13
RAB5C-208ENST00000551338 SAMD5Q5TGI4 173 aa8□□□□□ -1.13
RAB5C-208ENST00000551338 RETNQ9HD89 108 aa8□□□□□ -1.13
RAB5C-208ENST00000551338 A0A096LPF7 62 aa7.99□□□□□ -1.13
RAB5C-208ENST00000551338 TMEM238C9JI98 176 aa7.99□□□□□ -1.13
RAB5C-208ENST00000551338 NDUFA1O15239 70 aa7.99□□□□□ -1.13
RAB5C-208ENST00000551338 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
RAB5C-208ENST00000551338 SPANXDQ9BXN6 97 aa7.98□□□□□ -1.13
RAB5C-208ENST00000551338 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
RAB5C-208ENST00000551338 SPCS1Q9Y6A9 102 aa7.98□□□□□ -1.13
RAB5C-208ENST00000551338 G3V4G9 280 aa7.97□□□□□ -1.13
RAB5C-208ENST00000551338 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
RAB5C-208ENST00000551338 TIMM17BO60830 172 aa7.97□□□□□ -1.13
RAB5C-208ENST00000551338 APOMO95445 188 aa7.97□□□□□ -1.13
RAB5C-208ENST00000551338 FABP2P12104 132 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms