RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 SHISA2Q6UWI4 295 aa11.02□□□□□ -0.65
SCN8A-206ENST00000550891 LYRM9A8MSI8 78 aa11.01□□□□□ -0.65
SCN8A-206ENST00000550891 IGHV4-30-4P0DP06 118 aa11.01□□□□□ -0.65
SCN8A-206ENST00000550891 OR5A1Q8NGJ0 315 aa11.01□□□□□ -0.65
SCN8A-206ENST00000550891 TAX1BP3O14907 124 aa11.01□□□□□ -0.65
SCN8A-206ENST00000550891 WIPF1O43516 503 aa11.01□□□□□ -0.65
SCN8A-206ENST00000550891 MRPS36P82909 103 aaKnown RBP11.01□□□□□ -0.65
SCN8A-206ENST00000550891 CEND1Q8N111 149 aa11.01□□□□□ -0.65
SCN8A-206ENST00000550891 LINC00469Q8N7U9 141 aa11.01□□□□□ -0.65
SCN8A-206ENST00000550891 PLEKHB2Q96CS7 222 aa11.01□□□□□ -0.65
SCN8A-206ENST00000550891 TMEM223A0PJW6 202 aa11□□□□□ -0.65
SCN8A-206ENST00000550891 OXLD1Q5BKU9 147 aa11□□□□□ -0.65
SCN8A-206ENST00000550891 GTSF1LQ9H1H1 148 aa11□□□□□ -0.65
SCN8A-206ENST00000550891 DEFB4AO15263 64 aa11□□□□□ -0.65
SCN8A-206ENST00000550891 LEPROTO15243 131 aa10.99□□□□□ -0.65
SCN8A-206ENST00000550891 NTM-AS1Q6ZSK4 140 aa10.99□□□□□ -0.65
SCN8A-206ENST00000550891 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
SCN8A-206ENST00000550891 SMIM13P0DJ93 91 aa10.99□□□□□ -0.65
SCN8A-206ENST00000550891 RAB37Q96AX2 223 aa10.99□□□□□ -0.65
SCN8A-206ENST00000550891 IGHV4-28A0A0C4DH34 117 aa10.98□□□□□ -0.65
SCN8A-206ENST00000550891 H3BRM9 83 aa10.98□□□□□ -0.65
SCN8A-206ENST00000550891 MIFP14174 115 aa10.98□□□□□ -0.65
SCN8A-206ENST00000550891 FXYD2P54710 66 aa10.98□□□□□ -0.65
SCN8A-206ENST00000550891 DAD1P61803 113 aa10.98□□□□□ -0.65
SCN8A-206ENST00000550891 CHCHD5Q9BSY4 110 aa10.98□□□□□ -0.65
SCN8A-206ENST00000550891 NHP2Q9NX24 153 aaKnown RBP10.98□□□□□ -0.65
SCN8A-206ENST00000550891 PRO0255Q9UI72 69 aa10.98□□□□□ -0.65
SCN8A-206ENST00000550891 LINC00694P0DN24 101 aa10.97□□□□□ -0.65
SCN8A-206ENST00000550891 GYPEP15421 78 aa10.97□□□□□ -0.65
SCN8A-206ENST00000550891 LINC00612Q8N6U2 182 aa10.97□□□□□ -0.65
SCN8A-206ENST00000550891 BAHCC1Q9P281 2608 aa10.97□□□□□ -0.65
SCN8A-206ENST00000550891 TM2D2Q9BX73 214 aa10.97□□□□□ -0.65
SCN8A-206ENST00000550891 CSDC2Q9Y534 153 aaKnown RBP10.97□□□□□ -0.65
SCN8A-206ENST00000550891 FAM104AQ969W3 186 aa10.97□□□□□ -0.65
SCN8A-206ENST00000550891 TRAV13-1A0A0B4J241 112 aa10.96□□□□□ -0.65
SCN8A-206ENST00000550891 TMEM238LA0A1B0GVL6 79 aa10.96□□□□□ -0.66
SCN8A-206ENST00000550891 A6NJY4 79 aa10.96□□□□□ -0.66
SCN8A-206ENST00000550891 PAX4O43316 350 aa10.96□□□□□ -0.66
SCN8A-206ENST00000550891 UBE2D1P51668 147 aa10.96□□□□□ -0.66
SCN8A-206ENST00000550891 TSPEAR-AS2P59090 65 aa10.96□□□□□ -0.66
SCN8A-206ENST00000550891 ATP6V0E2Q8NHE4 81 aa10.96□□□□□ -0.66
SCN8A-206ENST00000550891 H7C423 109 aa10.95□□□□□ -0.66
SCN8A-206ENST00000550891 K7EP13 123 aa10.95□□□□□ -0.66
SCN8A-206ENST00000550891 TRBV6-8A0A0A6YYG3 113 aa10.95□□□□□ -0.66
SCN8A-206ENST00000550891 HERVK_113P63121 156 aa10.95□□□□□ -0.66
SCN8A-206ENST00000550891 GAGE6Q13070 117 aa10.95□□□□□ -0.66
SCN8A-206ENST00000550891 SPART-AS1P0CW21 52 aa10.94□□□□□ -0.66
SCN8A-206ENST00000550891 IGHV3-30-3P0DP02 117 aa10.94□□□□□ -0.66
SCN8A-206ENST00000550891 RNF183Q96D59 192 aa10.94□□□□□ -0.66
SCN8A-206ENST00000550891 NBEAL2Q6ZNJ1 2754 aa10.94□□□□□ -0.66
SCN8A-206ENST00000550891 H3BUT2 72 aa10.94□□□□□ -0.66
SCN8A-206ENST00000550891 SPINK8P0C7L1 97 aa10.94□□□□□ -0.66
SCN8A-206ENST00000550891 IGHV1-58A0A0C4DH39 117 aa10.93□□□□□ -0.66
SCN8A-206ENST00000550891 C9orf118A6NHY6 69 aa10.93□□□□□ -0.66
SCN8A-206ENST00000550891 TIRAPP58753 221 aa10.93□□□□□ -0.66
SCN8A-206ENST00000550891 SBSPONQ8IVN8 264 aa10.93□□□□□ -0.66
SCN8A-206ENST00000550891 TRAV8-3A0A0A6YYJ7 113 aa10.93□□□□□ -0.66
SCN8A-206ENST00000550891 A0A0J9YY99 117 aa10.93□□□□□ -0.66
SCN8A-206ENST00000550891 ATP5G1P05496 136 aa10.93□□□□□ -0.66
SCN8A-206ENST00000550891 CDC42SE2Q9NRR3 84 aa10.93□□□□□ -0.66
SCN8A-206ENST00000550891 HTN3P15516 51 aa10.92□□□□□ -0.66
SCN8A-206ENST00000550891 UBE2V1Q13404 147 aa10.92□□□□□ -0.66
SCN8A-206ENST00000550891 CDKN2A-AS1Q9UH64 79 aa10.92□□□□□ -0.66
SCN8A-206ENST00000550891 VSIG2Q96IQ7 327 aa10.92□□□□□ -0.66
SCN8A-206ENST00000550891 TMEM262E9PQX1 116 aa10.91□□□□□ -0.66
SCN8A-206ENST00000550891 Q8NAQ8 132 aa10.91□□□□□ -0.66
SCN8A-206ENST00000550891 IGKV3OR2-268A0A0C4DH90 116 aa10.91□□□□□ -0.66
SCN8A-206ENST00000550891 F5H768 121 aa10.91□□□□□ -0.66
SCN8A-206ENST00000550891 K7ERJ3 54 aa10.91□□□□□ -0.66
SCN8A-206ENST00000550891 A0A096LPF7 62 aa10.9□□□□□ -0.66
SCN8A-206ENST00000550891 NAA38Q9BRA0 125 aaKnown RBP10.9□□□□□ -0.66
SCN8A-206ENST00000550891 NDUFA12Q9UI09 145 aa10.9□□□□□ -0.66
SCN8A-206ENST00000550891 TMEM238C9JI98 176 aa10.9□□□□□ -0.66
SCN8A-206ENST00000550891 PRIMA1Q86XR5 153 aa10.9□□□□□ -0.66
SCN8A-206ENST00000550891 MAST4O15021 2626 aa10.9□□□□□ -0.66
SCN8A-206ENST00000550891 LINC00242Q5T6M2 205 aa10.9□□□□□ -0.67
SCN8A-206ENST00000550891 C12orf74Q32Q52 190 aa10.89□□□□□ -0.67
SCN8A-206ENST00000550891 GTF2H5Q6ZYL4 71 aa10.89□□□□□ -0.67
SCN8A-206ENST00000550891 TEX48A0A1B0GUV7 120 aa10.89□□□□□ -0.67
SCN8A-206ENST00000550891 GAGE10A6NGK3 116 aa10.89□□□□□ -0.67
SCN8A-206ENST00000550891 FABP2P12104 132 aa10.89□□□□□ -0.67
SCN8A-206ENST00000550891 KRTAP10-11P60412 298 aa10.89□□□□□ -0.67
SCN8A-206ENST00000550891 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-206ENST00000550891 STAB1Q9NY15 2570 aa10.88□□□□□ -0.67
SCN8A-206ENST00000550891 SAMD5Q5TGI4 173 aa10.88□□□□□ -0.67
SCN8A-206ENST00000550891 CELA1Q9UNI1 258 aa10.88□□□□□ -0.67
SCN8A-206ENST00000550891 IGLV5-45A0A087WSX0 123 aa10.87□□□□□ -0.67
SCN8A-206ENST00000550891 COX6A2Q02221 97 aa10.87□□□□□ -0.67
SCN8A-206ENST00000550891 TRAV26-1A0A087WT03 109 aa10.87□□□□□ -0.67
SCN8A-206ENST00000550891 CYSRT1A8MQ03 144 aa10.87□□□□□ -0.67
SCN8A-206ENST00000550891 EGFEM1PQ0D2K5 195 aa10.86□□□□□ -0.67
SCN8A-206ENST00000550891 CCL25O15444 150 aa10.86□□□□□ -0.67
SCN8A-206ENST00000550891 A0A0J9YXY3 114 aa10.85□□□□□ -0.67
SCN8A-206ENST00000550891 APOMO95445 188 aa10.85□□□□□ -0.67
SCN8A-206ENST00000550891 PRSS2P07478 247 aa10.85□□□□□ -0.67
SCN8A-206ENST00000550891 A0A1W2PPM0 123 aa10.85□□□□□ -0.67
SCN8A-206ENST00000550891 A8MZ25 164 aa10.85□□□□□ -0.67
SCN8A-206ENST00000550891 C10orf126Q8N4M7 172 aa10.85□□□□□ -0.67
SCN8A-206ENST00000550891 ZFAND6Q6FIF0 208 aa10.85□□□□□ -0.67
SCN8A-206ENST00000550891 IGLV4-60A0A075B6I1 120 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms