RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 ATP1A1-AS1Q5TC04 95 aa6.46□□□□□ -1.38
PPFIA2-220ENST00000550584 RNASE3P12724 160 aaKnown RBP6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 NUP210Q8TEM1 1887 aaPredicted RBP6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 CEP290O15078 2479 aa6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 C22orf34Q6ZV56 151 aa6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 HELZP42694 1942 aaKnown RBP6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 CFAP47Q6ZTR5 3102 aa6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 TRBV6-8A0A0A6YYG3 113 aa6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 KLLNB2CW77 178 aa6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 CCDC140Q96MF4 163 aa6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 C1orf158Q8N1D5 194 aa6.45□□□□□ -1.38
PPFIA2-220ENST00000550584 HILS1P60008 231 aa6.44□□□□□ -1.38
PPFIA2-220ENST00000550584 TMEM131Q92545 1883 aa6.44□□□□□ -1.38
PPFIA2-220ENST00000550584 GYPEP15421 78 aa6.44□□□□□ -1.38
PPFIA2-220ENST00000550584 PLA2G5P39877 138 aa6.44□□□□□ -1.38
PPFIA2-220ENST00000550584 ELOF1P60002 83 aaKnown RBP6.44□□□□□ -1.38
PPFIA2-220ENST00000550584 NCKAP5O14513 1909 aa6.44□□□□□ -1.38
PPFIA2-220ENST00000550584 ADAMTSL4-AS1Q5T5F5 129 aa6.44□□□□□ -1.38
PPFIA2-220ENST00000550584 C5orf56Q8N8D9 126 aa6.44□□□□□ -1.38
PPFIA2-220ENST00000550584 SPAG11AQ6PDA7 123 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 PRRC2BQ5JSZ5 2229 aaKnown RBP6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 DMXL1Q9Y485 3027 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 FREM2Q5SZK8 3169 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 EML6Q6ZMW3 1958 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 DOCK7Q96N67 2140 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 FHL3Q13643 280 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 WFDC10BQ8IUB3 73 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 PRR4Q16378 134 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 SMIM1B2RUZ4 78 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 BRWD1Q9NSI6 2320 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
PPFIA2-220ENST00000550584 LRCOL1A6NCL2 159 aa6.42□□□□□ -1.38
PPFIA2-220ENST00000550584 LINC01356Q8N9X3 169 aa6.42□□□□□ -1.38
PPFIA2-220ENST00000550584 VWA8A3KMH1 1905 aa6.42□□□□□ -1.38
PPFIA2-220ENST00000550584 C11orf21Q9P2W6 132 aa6.42□□□□□ -1.38
PPFIA2-220ENST00000550584 SPENQ96T58 3664 aaKnown RBP6.41□□□□□ -1.38
PPFIA2-220ENST00000550584 PSCAO43653 123 aa6.41□□□□□ -1.38
PPFIA2-220ENST00000550584 PLA2G2AP14555 144 aa6.41□□□□□ -1.38
PPFIA2-220ENST00000550584 CLPSL2Q6UWE3 100 aa6.41□□□□□ -1.38
PPFIA2-220ENST00000550584 LINC00575Q6W349 94 aa6.41□□□□□ -1.38
PPFIA2-220ENST00000550584 ODF3BA8MYP8 253 aa6.41□□□□□ -1.38
PPFIA2-220ENST00000550584 GAS8-AS1O95177 125 aa6.41□□□□□ -1.38
PPFIA2-220ENST00000550584 IGFL3Q6UXB1 125 aa6.41□□□□□ -1.38
PPFIA2-220ENST00000550584 H0Y9P7 68 aa6.4□□□□□ -1.38
PPFIA2-220ENST00000550584 MGAMO43451 1857 aa6.4□□□□□ -1.38
PPFIA2-220ENST00000550584 C3orf84H3BNL1 204 aa6.4□□□□□ -1.38
PPFIA2-220ENST00000550584 LINC00242Q5T6M2 205 aa6.4□□□□□ -1.38
PPFIA2-220ENST00000550584 SEM1Q6ZVN7 128 aa6.4□□□□□ -1.38
PPFIA2-220ENST00000550584 THADAQ6YHU6 1953 aa6.4□□□□□ -1.39
PPFIA2-220ENST00000550584 DEFB114Q30KQ6 69 aa6.4□□□□□ -1.39
PPFIA2-220ENST00000550584 CDC42SE2Q9NRR3 84 aa6.4□□□□□ -1.39
PPFIA2-220ENST00000550584 IGLV5-39A0A0G2JS06 123 aa6.39□□□□□ -1.39
PPFIA2-220ENST00000550584 K7EQG2 157 aa6.39□□□□□ -1.39
PPFIA2-220ENST00000550584 CHCHD10Q8WYQ3 142 aaPredicted RBP6.39□□□□□ -1.39
PPFIA2-220ENST00000550584 PRO0255Q9UI72 69 aa6.39□□□□□ -1.39
PPFIA2-220ENST00000550584 MSMBP08118 114 aa6.39□□□□□ -1.39
PPFIA2-220ENST00000550584 SMCR5Q8TEV8 140 aa6.39□□□□□ -1.39
PPFIA2-220ENST00000550584 H7BZZ5 65 aa6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 C1orf229Q6ZS94 237 aaPredicted RBP6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 WFDC13Q8IUB5 93 aa6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 ATG2AQ2TAZ0 1938 aa6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 BRD3OSQ6XYD6 125 aa6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 IL17DQ8TAD2 202 aa6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 LY6LH3BQJ8 138 aa6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 REG3AQ06141 175 aa6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 C2orf48Q96LS8 159 aa6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 CHCHD7Q9BUK0 85 aa6.38□□□□□ -1.39
PPFIA2-220ENST00000550584 TP53AIP1Q9HCN2 124 aa6.37□□□□□ -1.39
PPFIA2-220ENST00000550584 IGF1P05019 195 aa6.37□□□□□ -1.39
PPFIA2-220ENST00000550584 MYOFQ9NZM1 2061 aa6.37□□□□□ -1.39
PPFIA2-220ENST00000550584 ZNF843Q8N446 348 aa6.37□□□□□ -1.39
PPFIA2-220ENST00000550584 BRI3O95415 125 aa6.37□□□□□ -1.39
PPFIA2-220ENST00000550584 Q6ZQT0 140 aa6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 C6orf223Q8N319 242 aa6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 IGKV2D-24A0A075B6R9 120 aa6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 IGLV5-45A0A087WSX0 123 aa6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 DAZAP2Q15038 168 aaPredicted RBP6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 Q1T7F1 81 aa6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 WISP2O76076 250 aa6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 RUSC1-AS1Q66K80 236 aa6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 KNL1Q8NG31 2342 aa6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 LINC00959A0A1B0GUT2 108 aa6.36□□□□□ -1.39
PPFIA2-220ENST00000550584 C9orf116Q5BN46 136 aaPredicted RBP6.35□□□□□ -1.39
PPFIA2-220ENST00000550584 ANAPC1Q9H1A4 1944 aa6.35□□□□□ -1.39
PPFIA2-220ENST00000550584 KIAA1549LQ6ZVL6 1849 aa6.35□□□□□ -1.39
PPFIA2-220ENST00000550584 PHF3Q92576 2039 aaKnown RBP6.35□□□□□ -1.39
PPFIA2-220ENST00000550584 BPESC1Q9GZL8 116 aa6.35□□□□□ -1.39
PPFIA2-220ENST00000550584 Q6ZSV7 163 aa6.34□□□□□ -1.39
PPFIA2-220ENST00000550584 UBE2DNLQ8IWF7 75 aa6.34□□□□□ -1.39
PPFIA2-220ENST00000550584 TANC2Q9HCD6 1990 aa6.34□□□□□ -1.39
PPFIA2-220ENST00000550584 SPART-AS1P0CW21 52 aa6.34□□□□□ -1.39
PPFIA2-220ENST00000550584 PRR9Q5T870 116 aa6.34□□□□□ -1.39
PPFIA2-220ENST00000550584 ALPK2Q86TB3 2170 aa6.34□□□□□ -1.39
PPFIA2-220ENST00000550584 Q5XG85 94 aa6.34□□□□□ -1.39
PPFIA2-220ENST00000550584 C1orf137Q5JT78 98 aa6.34□□□□□ -1.4
PPFIA2-220ENST00000550584 IGLV10-54A0A075B6I4 117 aa6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 IGHV4-59P01825 116 aa6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 SMG1Q96Q15 3661 aaKnown RBP6.33□□□□□ -1.4
PPFIA2-220ENST00000550584 ADAMTS9Q9P2N4 1935 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms