RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 ANKRD29Q8N6D5 301 aa7.57□□□□□ -1.2
ERBB3-214ENST00000550070 SORL1Q92673 2214 aa7.56□□□□□ -1.2
ERBB3-214ENST00000550070 I3L3M4 83 aa7.56□□□□□ -1.2
ERBB3-214ENST00000550070 MSMBP08118 114 aa7.56□□□□□ -1.2
ERBB3-214ENST00000550070 SNRPD3P62318 126 aaKnown RBP7.56□□□□□ -1.2
ERBB3-214ENST00000550070 CCL19Q99731 98 aa7.56□□□□□ -1.2
ERBB3-214ENST00000550070 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.56□□□□□ -1.26e-7■■□□□ 13
ERBB3-214ENST00000550070 USP17L23D6RBM5 183 aa7.55□□□□□ -1.2
ERBB3-214ENST00000550070 H7C2G1 150 aa7.55□□□□□ -1.2
ERBB3-214ENST00000550070 FAM104AQ969W3 186 aa7.55□□□□□ -1.2
ERBB3-214ENST00000550070 CD164L2Q6UWJ8 174 aa7.55□□□□□ -1.2
ERBB3-214ENST00000550070 A0A0B4J2C4 111 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 M0R2P5 195 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 SLC25A20O43772 301 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 IGHV4-59P01825 116 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 RBMY1A1P0DJD3 496 aaKnown RBP7.54□□□□□ -1.2
ERBB3-214ENST00000550070 RBMY1CP0DJD4 496 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 RBMY1FQ15415 496 aaKnown RBP7.54□□□□□ -1.2
ERBB3-214ENST00000550070 C11orf45Q8TAV5 145 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 IGHV3-73A0A0B4J1V6 119 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 ADARB2-AS1A8MUL3 147 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 SYNJ2BPP57105 145 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 PROK1P58294 105 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 ZNF843Q8N446 348 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 Q9UF83 564 aa7.54□□□□□ -1.2
ERBB3-214ENST00000550070 CSPG4Q6UVK1 2322 aa7.53□□□□□ -1.2
ERBB3-214ENST00000550070 IGHV3-30-3P0DP02 117 aa7.53□□□□□ -1.2
ERBB3-214ENST00000550070 CEMP1Q6PRD7 247 aaPredicted RBP7.53□□□□□ -1.2
ERBB3-214ENST00000550070 LINC01561Q8N1V8 128 aa7.53□□□□□ -1.2
ERBB3-214ENST00000550070 HILS1P60008 231 aa7.53□□□□□ -1.2
ERBB3-214ENST00000550070 PMAIP1Q13794 54 aa7.53□□□□□ -1.2
ERBB3-214ENST00000550070 TRAV8-3A0A0A6YYJ7 113 aa7.52□□□□□ -1.21
ERBB3-214ENST00000550070 HTN1P15515 57 aa7.52□□□□□ -1.21
ERBB3-214ENST00000550070 DEFB112Q30KQ8 113 aa7.52□□□□□ -1.21
ERBB3-214ENST00000550070 PRRC2AP48634 2157 aaKnown RBP7.52□□□□□ -1.21
ERBB3-214ENST00000550070 PRM2P04554 102 aa7.52□□□□□ -1.21
ERBB3-214ENST00000550070 RNASE13Q5GAN3 156 aaKnown RBP7.52□□□□□ -1.21
ERBB3-214ENST00000550070 LITAFQ99732 161 aa7.52□□□□□ -1.21
ERBB3-214ENST00000550070 TRGV11A0A075B6L2 103 aa7.51□□□□□ -1.21
ERBB3-214ENST00000550070 CD28P10747 220 aa7.51□□□□□ -1.21
ERBB3-214ENST00000550070 C9orf153Q5TBE3 101 aa7.51□□□□□ -1.21
ERBB3-214ENST00000550070 PYGO1Q9Y3Y4 419 aa7.51□□□□□ -1.21
ERBB3-214ENST00000550070 CCDC168Q8NDH2 2452 aa7.51□□□□□ -1.21
ERBB3-214ENST00000550070 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.51□□□□□ -1.21
ERBB3-214ENST00000550070 MRPS36P82909 103 aaKnown RBP7.51□□□□□ -1.21
ERBB3-214ENST00000550070 Q1RN00 199 aa7.51□□□□□ -1.21
ERBB3-214ENST00000550070 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
ERBB3-214ENST00000550070 ITPR2Q14571 2701 aa7.51□□□□□ -1.21
ERBB3-214ENST00000550070 NOTCH2Q04721 2471 aa7.51□□□□□ -1.21
ERBB3-214ENST00000550070 KNCNA6PVL3 124 aa7.5□□□□□ -1.21
ERBB3-214ENST00000550070 B4DSR2 109 aa7.5□□□□□ -1.21
ERBB3-214ENST00000550070 ADAMTSL4-AS1Q5T5F5 129 aa7.5□□□□□ -1.21
ERBB3-214ENST00000550070 NACAE9PAV3 2078 aa7.5□□□□□ -1.21
ERBB3-214ENST00000550070 A0A0U1RQV1 116 aa7.5□□□□□ -1.21
ERBB3-214ENST00000550070 PFN2P35080 140 aa7.5□□□□□ -1.21
ERBB3-214ENST00000550070 APCP25054 2843 aa7.5□□□□□ -1.21
ERBB3-214ENST00000550070 TMEM262E9PQX1 116 aa7.5□□□□□ -1.21
ERBB3-214ENST00000550070 SNCGO76070 127 aa7.5□□□□□ -1.21
ERBB3-214ENST00000550070 HOXD3P31249 432 aaPredicted RBP7.5□□□□□ -1.21
ERBB3-214ENST00000550070 TRIAP1O43715 76 aa7.49□□□□□ -1.21
ERBB3-214ENST00000550070 PRSS2P07478 247 aa7.49□□□□□ -1.21
ERBB3-214ENST00000550070 ATXN8Q156A1 80 aa7.49□□□□□ -1.21
ERBB3-214ENST00000550070 Q6ZSN1 163 aa7.49□□□□□ -1.21
ERBB3-214ENST00000550070 NTN5Q8WTR8 489 aaPredicted RBP7.49□□□□□ -1.21
ERBB3-214ENST00000550070 IGHV1-58A0A0C4DH39 117 aa7.49□□□□□ -1.21
ERBB3-214ENST00000550070 TRBV30A0A0K0K1B3 111 aa7.49□□□□□ -1.21
ERBB3-214ENST00000550070 LINC00482Q8N8I6 264 aa7.49□□□□□ -1.21
ERBB3-214ENST00000550070 DPH3Q96FX2 82 aa7.49□□□□□ -1.21
ERBB3-214ENST00000550070 CHCHD7Q9BUK0 85 aa7.48□□□□□ -1.21
ERBB3-214ENST00000550070 NPC2P61916 151 aa7.48□□□□□ -1.21
ERBB3-214ENST00000550070 Q6ZSV7 163 aa7.48□□□□□ -1.21
ERBB3-214ENST00000550070 NDUFA12Q9UI09 145 aa7.48□□□□□ -1.21
ERBB3-214ENST00000550070 CUBNO60494 3623 aa7.47□□□□□ -1.21
ERBB3-214ENST00000550070 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.47□□□□□ -1.21
ERBB3-214ENST00000550070 IGKV2-29A2NJV5 120 aaPredicted RBP7.47□□□□□ -1.21
ERBB3-214ENST00000550070 RBMY1BA6NDE4 496 aaKnown RBP7.47□□□□□ -1.21
ERBB3-214ENST00000550070 RBMY1EA6NEQ0 496 aaKnown RBP7.47□□□□□ -1.21
ERBB3-214ENST00000550070 RBMY1DP0C7P1 496 aaKnown RBP7.47□□□□□ -1.21
ERBB3-214ENST00000550070 DEFB131AP59861 70 aa7.47□□□□□ -1.21
ERBB3-214ENST00000550070 VSIG2Q96IQ7 327 aa7.47□□□□□ -1.21
ERBB3-214ENST00000550070 UBE2D4Q9Y2X8 147 aa7.47□□□□□ -1.21
ERBB3-214ENST00000550070 TEX49A0A1B0GTD5 131 aa7.47□□□□□ -1.21
ERBB3-214ENST00000550070 SPANXDQ9BXN6 97 aa7.47□□□□□ -1.21
ERBB3-214ENST00000550070 C18orf65Q6ZTR6 163 aa7.46□□□□□ -1.21
ERBB3-214ENST00000550070 LINC01600Q96MT4 127 aa7.46□□□□□ -1.21
ERBB3-214ENST00000550070 TRBV10-2A0A0K0K1G8 114 aa7.46□□□□□ -1.22
ERBB3-214ENST00000550070 H3BMM0 161 aa7.46□□□□□ -1.22
ERBB3-214ENST00000550070 NDUFC2O95298 119 aa7.46□□□□□ -1.22
ERBB3-214ENST00000550070 MIAQ16674 131 aa7.46□□□□□ -1.22
ERBB3-214ENST00000550070 C3orf22Q8N5N4 141 aa7.46□□□□□ -1.22
ERBB3-214ENST00000550070 UBE2E2Q96LR5 201 aa7.46□□□□□ -1.22
ERBB3-214ENST00000550070 KLK5Q9Y337 293 aaPredicted RBP7.46□□□□□ -1.22
ERBB3-214ENST00000550070 ICOSQ9Y6W8 199 aa7.46□□□□□ -1.22
ERBB3-214ENST00000550070 TLN2Q9Y4G6 2542 aa7.45□□□□□ -1.22
ERBB3-214ENST00000550070 IGHV3-38A0A0C4DH36 116 aa7.45□□□□□ -1.22
ERBB3-214ENST00000550070 SLURP1P55000 103 aa7.45□□□□□ -1.22
ERBB3-214ENST00000550070 DEFB136Q30KP8 78 aa7.45□□□□□ -1.22
ERBB3-214ENST00000550070 LINC00467Q9BRT7 94 aa7.45□□□□□ -1.22
ERBB3-214ENST00000550070 FLNBO75369 2602 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms