RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ZNF815PA8K554 130 aa13.5□□□□□ -0.25
BRF1-215ENST00000549655 LYRM9A8MSI8 78 aa13.5□□□□□ -0.25
BRF1-215ENST00000549655 STAB1Q9NY15 2570 aa13.5□□□□□ -0.25
BRF1-215ENST00000549655 KRTAP10-11P60412 298 aa13.49□□□□□ -0.25
BRF1-215ENST00000549655 SBSPONQ8IVN8 264 aa13.49□□□□□ -0.25
BRF1-215ENST00000549655 COX11Q9Y6N1 276 aa13.49□□□□□ -0.25
BRF1-215ENST00000549655 TAX1BP3O14907 124 aa13.48□□□□□ -0.25
BRF1-215ENST00000549655 GCSHP23434 173 aa13.47□□□□□ -0.25
BRF1-215ENST00000549655 TSPEAR-AS2P59090 65 aa13.47□□□□□ -0.25
BRF1-215ENST00000549655 RNF183Q96D59 192 aa13.47□□□□□ -0.25
BRF1-215ENST00000549655 TMEM243Q9BU79 118 aa13.47□□□□□ -0.25
BRF1-215ENST00000549655 CSDC2Q9Y534 153 aaKnown RBP13.47□□□□□ -0.25
BRF1-215ENST00000549655 TINCRA0A1B0GVN0 87 aa13.47□□□□□ -0.25
BRF1-215ENST00000549655 MIFP14174 115 aa13.47□□□□□ -0.25
BRF1-215ENST00000549655 Q8NAQ8 132 aa13.47□□□□□ -0.25
BRF1-215ENST00000549655 A6NDN8 102 aa13.46□□□□□ -0.25
BRF1-215ENST00000549655 J3QQQ9 107 aa13.45□□□□□ -0.26
BRF1-215ENST00000549655 UBE2D1P51668 147 aa13.45□□□□□ -0.26
BRF1-215ENST00000549655 IGHV3-64A0A075B6Q5 118 aa13.45□□□□□ -0.26
BRF1-215ENST00000549655 UBE2L6O14933 153 aa13.45□□□□□ -0.26
BRF1-215ENST00000549655 LEPROTO15243 131 aa13.45□□□□□ -0.26
BRF1-215ENST00000549655 EGFEM1PQ0D2K5 195 aa13.45□□□□□ -0.26
BRF1-215ENST00000549655 SCGB1D4Q6XE38 83 aa13.45□□□□□ -0.26
BRF1-215ENST00000549655 CEND1Q8N111 149 aa13.45□□□□□ -0.26
BRF1-215ENST00000549655 GYPEP15421 78 aa13.44□□□□□ -0.26
BRF1-215ENST00000549655 LGALS3P17931 250 aaKnown RBP13.44□□□□□ -0.26
BRF1-215ENST00000549655 FXYD2P54710 66 aa13.44□□□□□ -0.26
BRF1-215ENST00000549655 SMAGPQ0VAQ4 97 aa13.44□□□□□ -0.26
BRF1-215ENST00000549655 TAL2Q16559 108 aa13.44□□□□□ -0.26
BRF1-215ENST00000549655 PLEKHB2Q96CS7 222 aa13.44□□□□□ -0.26
BRF1-215ENST00000549655 HIST1H4GQ99525 98 aa13.44□□□□□ -0.26
BRF1-215ENST00000549655 PRO0255Q9UI72 69 aa13.44□□□□□ -0.26
BRF1-215ENST00000549655 AMMECR1LQ6DCA0 310 aa13.43□□□□□ -0.26
BRF1-215ENST00000549655 TM2D2Q9BX73 214 aa13.43□□□□□ -0.26
BRF1-215ENST00000549655 MAST4O15021 2626 aa13.43□□□□□ -0.26
BRF1-215ENST00000549655 K7EP13 123 aa13.43□□□□□ -0.26
BRF1-215ENST00000549655 OR5A1Q8NGJ0 315 aa13.43□□□□□ -0.26
BRF1-215ENST00000549655 GEMIN7Q9H840 131 aaKnown RBP13.43□□□□□ -0.26
BRF1-215ENST00000549655 TRBV6-8A0A0A6YYG3 113 aa13.42□□□□□ -0.26
BRF1-215ENST00000549655 DAD1P61803 113 aa13.42□□□□□ -0.26
BRF1-215ENST00000549655 CDC42SE2Q9NRR3 84 aa13.42□□□□□ -0.26
BRF1-215ENST00000549655 H7C423 109 aa13.41□□□□□ -0.26
BRF1-215ENST00000549655 LINC00469Q8N7U9 141 aa13.41□□□□□ -0.26
BRF1-215ENST00000549655 CELA1Q9UNI1 258 aa13.41□□□□□ -0.26
BRF1-215ENST00000549655 PTTG1IPP53801 180 aa13.41□□□□□ -0.26
BRF1-215ENST00000549655 TMEM101Q96IK0 257 aa13.41□□□□□ -0.26
BRF1-215ENST00000549655 TIRAPP58753 221 aa13.4□□□□□ -0.26
BRF1-215ENST00000549655 ATP6V0E2Q8NHE4 81 aa13.4□□□□□ -0.26
BRF1-215ENST00000549655 H3BRM9 83 aa13.4□□□□□ -0.27
BRF1-215ENST00000549655 PAX4O43316 350 aa13.4□□□□□ -0.27
BRF1-215ENST00000549655 IGHV3-30-3P0DP02 117 aa13.4□□□□□ -0.27
BRF1-215ENST00000549655 TRAV8-3A0A0A6YYJ7 113 aa13.39□□□□□ -0.27
BRF1-215ENST00000549655 A0A0J9YY99 117 aa13.39□□□□□ -0.27
BRF1-215ENST00000549655 SPART-AS1P0CW21 52 aa13.39□□□□□ -0.27
BRF1-215ENST00000549655 GAGE6Q13070 117 aa13.39□□□□□ -0.27
BRF1-215ENST00000549655 TRAV13-1A0A0B4J241 112 aa13.38□□□□□ -0.27
BRF1-215ENST00000549655 A8MZ25 164 aa13.38□□□□□ -0.27
BRF1-215ENST00000549655 LINC00242Q5T6M2 205 aa13.38□□□□□ -0.27
BRF1-215ENST00000549655 CHCHD5Q9BSY4 110 aa13.38□□□□□ -0.27
BRF1-215ENST00000549655 IGLV5-45A0A087WSX0 123 aa13.38□□□□□ -0.27
BRF1-215ENST00000549655 IGHV1-58A0A0C4DH39 117 aa13.38□□□□□ -0.27
BRF1-215ENST00000549655 SPINK8P0C7L1 97 aa13.38□□□□□ -0.27
BRF1-215ENST00000549655 COX6A2Q02221 97 aa13.38□□□□□ -0.27
BRF1-215ENST00000549655 CDKN2A-AS1Q9UH64 79 aa13.38□□□□□ -0.27
BRF1-215ENST00000549655 PKD1L1Q8TDX9 2849 aa13.37□□□□□ -0.27
BRF1-215ENST00000549655 G3V4G9 280 aa13.36□□□□□ -0.27
BRF1-215ENST00000549655 ATP5G1P05496 136 aa13.36□□□□□ -0.27
BRF1-215ENST00000549655 SMIM13P0DJ93 91 aa13.36□□□□□ -0.27
BRF1-215ENST00000549655 HERVK_113P63121 156 aa13.36□□□□□ -0.27
BRF1-215ENST00000549655 SRSF9Q13242 221 aaKnown RBP eCLIP13.36□□□□□ -0.27
BRF1-215ENST00000549655 FAM19A3Q7Z5A8 133 aa13.36□□□□□ -0.27
BRF1-215ENST00000549655 RAB37Q96AX2 223 aa13.36□□□□□ -0.27
BRF1-215ENST00000549655 VSIG2Q96IQ7 327 aa13.36□□□□□ -0.27
BRF1-215ENST00000549655 COL6A5A8TX70 2615 aa13.36□□□□□ -0.27
BRF1-215ENST00000549655 NHP2Q9NX24 153 aaKnown RBP13.36□□□□□ -0.27
BRF1-215ENST00000549655 A0A096LPF7 62 aa13.34□□□□□ -0.27
BRF1-215ENST00000549655 VAMP3Q15836 100 aa13.34□□□□□ -0.27
BRF1-215ENST00000549655 C9orf118A6NHY6 69 aa13.34□□□□□ -0.27
BRF1-215ENST00000549655 K7ERJ3 54 aa13.34□□□□□ -0.27
BRF1-215ENST00000549655 RETNQ9HD89 108 aa13.34□□□□□ -0.27
BRF1-215ENST00000549655 IGLV4-60A0A075B6I1 120 aa13.33□□□□□ -0.28
BRF1-215ENST00000549655 F5H768 121 aa13.33□□□□□ -0.28
BRF1-215ENST00000549655 SPANXB1Q9NS25 103 aaPredicted RBP13.33□□□□□ -0.28
BRF1-215ENST00000549655 C10orf126Q8N4M7 172 aa13.32□□□□□ -0.28
BRF1-215ENST00000549655 TRAV26-1A0A087WT03 109 aa13.32□□□□□ -0.28
BRF1-215ENST00000549655 HTN3P15516 51 aa13.31□□□□□ -0.28
BRF1-215ENST00000549655 CMYA5Q8N3K9 4069 aa13.31□□□□□ -0.28
BRF1-215ENST00000549655 H3BUT2 72 aa13.31□□□□□ -0.28
BRF1-215ENST00000549655 NAA38Q9BRA0 125 aaKnown RBP13.31□□□□□ -0.28
BRF1-215ENST00000549655 NDUFA12Q9UI09 145 aa13.31□□□□□ -0.28
BRF1-215ENST00000549655 TEX48A0A1B0GUV7 120 aa13.3□□□□□ -0.28
BRF1-215ENST00000549655 UBE2V1Q13404 147 aa13.3□□□□□ -0.28
BRF1-215ENST00000549655 C12orf74Q32Q52 190 aa13.3□□□□□ -0.28
BRF1-215ENST00000549655 A0A0J9YXY3 114 aa13.29□□□□□ -0.28
BRF1-215ENST00000549655 TMEM262E9PQX1 116 aa13.29□□□□□ -0.28
BRF1-215ENST00000549655 IGHV3-30P01768 117 aa13.29□□□□□ -0.28
BRF1-215ENST00000549655 IGHV3-30-5P0DP03 117 aa13.29□□□□□ -0.28
BRF1-215ENST00000549655 ZFAND6Q6FIF0 208 aa13.29□□□□□ -0.28
BRF1-215ENST00000549655 IGKV3OR2-268A0A0C4DH90 116 aa13.28□□□□□ -0.28
BRF1-215ENST00000549655 SAMD5Q5TGI4 173 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms