RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 SBSPONQ8IVN8 264 aa8.64□□□□□ -1.03
RAPGEF3-219ENST00000549151 PEMTQ9UBM1 199 aa8.64□□□□□ -1.03
RAPGEF3-219ENST00000549151 ITPR3Q14573 2671 aa8.64□□□□□ -1.03
RAPGEF3-219ENST00000549151 ICOSQ9Y6W8 199 aa8.64□□□□□ -1.03
RAPGEF3-219ENST00000549151 C2orf82Q6UX34 121 aa8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 J3QLI3 93 aa8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 INSP01308 110 aa8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 IGHV4-31P0DP07 118 aa8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 RPL13AP40429 203 aaKnown RBP8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 A0A096LNT2 108 aa8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 COX6A2Q02221 97 aa8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 SPANXA1Q9NS26 97 aa8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 SETXQ7Z333 2677 aaKnown RBP8.63□□□□□ -1.03
RAPGEF3-219ENST00000549151 COX6CP09669 75 aa8.62□□□□□ -1.03
RAPGEF3-219ENST00000549151 MIAQ16674 131 aa8.62□□□□□ -1.03
RAPGEF3-219ENST00000549151 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
RAPGEF3-219ENST00000549151 C11orf72Q8NBR9 251 aa8.62□□□□□ -1.03
RAPGEF3-219ENST00000549151 Q9H8V8 135 aa8.62□□□□□ -1.03
RAPGEF3-219ENST00000549151 ZNF469Q96JG9 3925 aaPredicted RBP8.61□□□□□ -1.03
RAPGEF3-219ENST00000549151 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
RAPGEF3-219ENST00000549151 TMEM262E9PQX1 116 aa8.61□□□□□ -1.03
RAPGEF3-219ENST00000549151 STHQ8IWL8 128 aa8.61□□□□□ -1.03
RAPGEF3-219ENST00000549151 TMEM101Q96IK0 257 aa8.61□□□□□ -1.03
RAPGEF3-219ENST00000549151 DEFB114Q30KQ6 69 aa8.61□□□□□ -1.03
RAPGEF3-219ENST00000549151 TEX29Q8N6K0 151 aa8.61□□□□□ -1.03
RAPGEF3-219ENST00000549151 TRBV30A0A0K0K1B3 111 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 RNF183Q96D59 192 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 CR1P17927 2039 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 SNCGO76070 127 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 GAGE4Q13068 117 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 GAGE5Q13069 117 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 ZFAND6Q6FIF0 208 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 ANAPC13Q9BS18 74 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 TRBV10-2A0A0K0K1G8 114 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 CRLF1O75462 422 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 MEIG1Q5JSS6 88 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 Q6ZTI0 123 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 UBE2WQ96B02 151 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 Q96MF0 132 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 APCP25054 2843 aa8.6□□□□□ -1.03
RAPGEF3-219ENST00000549151 TRAV8-4A0A0B4J246 113 aa8.59□□□□□ -1.03
RAPGEF3-219ENST00000549151 TRAV4A0A0B4J268 109 aa8.59□□□□□ -1.03
RAPGEF3-219ENST00000549151 ODF3L2Q3SX64 289 aa8.59□□□□□ -1.03
RAPGEF3-219ENST00000549151 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
RAPGEF3-219ENST00000549151 SPANXCQ9NY87 97 aa8.59□□□□□ -1.03
RAPGEF3-219ENST00000549151 H7C423 109 aa8.58□□□□□ -1.04
RAPGEF3-219ENST00000549151 CIRBPQ14011 172 aaKnown RBP8.58□□□□□ -1.04
RAPGEF3-219ENST00000549151 HERV-K104P63124 156 aa8.58□□□□□ -1.04
RAPGEF3-219ENST00000549151 RNF152Q8N8N0 203 aa8.58□□□□□ -1.04
RAPGEF3-219ENST00000549151 C4orf3Q8WVX3 66 aa8.58□□□□□ -1.04
RAPGEF3-219ENST00000549151 RS1O15537 224 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 GAGE2BQ13066 116 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 GAGE2EQ4V326 116 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 LINC00242Q5T6M2 205 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 PRIMA1Q86XR5 153 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 EDA2RQ9HAV5 297 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 YAE1D1Q9NRH1 226 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 GAGE2DQ9UEU5 116 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 AKAP9Q99996 3911 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 TTC32Q5I0X7 151 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 NBEAL2Q6ZNJ1 2754 aa8.57□□□□□ -1.04
RAPGEF3-219ENST00000549151 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
RAPGEF3-219ENST00000549151 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
RAPGEF3-219ENST00000549151 WFDC10AQ9H1F0 79 aa8.56□□□□□ -1.04
RAPGEF3-219ENST00000549151 NOP10Q9NPE3 64 aaKnown RBP8.56□□□□□ -1.04
RAPGEF3-219ENST00000549151 C15orf53Q8NAA6 179 aa8.56□□□□□ -1.04
RAPGEF3-219ENST00000549151 DNAJC30Q96LL9 226 aa8.56□□□□□ -1.04
RAPGEF3-219ENST00000549151 GCN1Q92616 2671 aaKnown RBP8.56□□□□□ -1.04
RAPGEF3-219ENST00000549151 FSHBP01225 129 aa8.56□□□□□ -1.04
RAPGEF3-219ENST00000549151 SS18L2Q9UHA2 77 aa8.56□□□□□ -1.04
RAPGEF3-219ENST00000549151 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 TOMM7Q9P0U1 55 aa8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 HELZ2Q9BYK8 2649 aaKnown RBP8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 NDUFA1O15239 70 aa8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 RPL35AP18077 110 aaKnown RBP8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 BEAN1Q3B7T3 259 aa8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 A8MTW9 85 aa8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 PLA2G2AP14555 144 aa8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 HERVK_113P63121 156 aa8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 NTM-AS1Q6ZSK4 140 aa8.55□□□□□ -1.04
RAPGEF3-219ENST00000549151 HIVEP2P31629 2446 aa8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 LOC100131303A0A0U1RQF7 123 aa8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 GAGE7O76087 117 aa8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 GAGE12FP0CL80 117 aa8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 GAGE12GP0CL81 117 aa8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 GAGE12IP0CL82 117 aa8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 BBC3Q96PG8 261 aaPredicted RBP8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 CITED2Q99967 270 aaPredicted RBP8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 TRGV2A0A075B6R0 118 aa8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 UBE2L6O14933 153 aa8.54□□□□□ -1.04
RAPGEF3-219ENST00000549151 K7EQD1 137 aa8.53□□□□□ -1.04
RAPGEF3-219ENST00000549151 LST1O00453 97 aa8.53□□□□□ -1.04
RAPGEF3-219ENST00000549151 TIRAPP58753 221 aa8.53□□□□□ -1.04
RAPGEF3-219ENST00000549151 PIK3CD-AS1Q5SR53 167 aa8.53□□□□□ -1.04
RAPGEF3-219ENST00000549151 Q8N2B8 174 aa8.53□□□□□ -1.04
RAPGEF3-219ENST00000549151 HECTD1Q9ULT8 2610 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms