RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 HIST1H2BLQ99880 126 aa10.82□□□□□ -0.68
TRAFD1-203ENST00000547063 DNAH10OSP0CZ25 163 aa10.81□□□□□ -0.68
TRAFD1-203ENST00000547063 ZNF664Q8N3J9 261 aa10.81□□□□□ -0.68
TRAFD1-203ENST00000547063 MAP1LC3CQ9BXW4 147 aa10.81□□□□□ -0.68
TRAFD1-203ENST00000547063 VCX2Q9H322 139 aa10.81□□□□□ -0.68
TRAFD1-203ENST00000547063 IGLV4-3A0A075B6K6 122 aa10.8□□□□□ -0.68
TRAFD1-203ENST00000547063 TRAV9-2A0A087WT02 112 aa10.8□□□□□ -0.68
TRAFD1-203ENST00000547063 LGALS9CQ6DKI2 356 aa10.8□□□□□ -0.68
TRAFD1-203ENST00000547063 TEX43Q6ZNM6 134 aa10.8□□□□□ -0.68
TRAFD1-203ENST00000547063 Q9H8V8 135 aa10.8□□□□□ -0.68
TRAFD1-203ENST00000547063 CDC42SE2Q9NRR3 84 aa10.8□□□□□ -0.68
TRAFD1-203ENST00000547063 ANGP03950 147 aaKnown RBP10.79□□□□□ -0.68
TRAFD1-203ENST00000547063 PRSS1P07477 247 aa10.79□□□□□ -0.68
TRAFD1-203ENST00000547063 C10orf126Q8N4M7 172 aa10.79□□□□□ -0.68
TRAFD1-203ENST00000547063 Q8N976 141 aa10.79□□□□□ -0.68
TRAFD1-203ENST00000547063 C2orf88Q9BSF0 95 aa10.79□□□□□ -0.68
TRAFD1-203ENST00000547063 IGLV4-60A0A075B6I1 120 aa10.78□□□□□ -0.68
TRAFD1-203ENST00000547063 IGHV3-30P01768 117 aa10.78□□□□□ -0.68
TRAFD1-203ENST00000547063 IGHV3-33P01772 117 aa10.78□□□□□ -0.68
TRAFD1-203ENST00000547063 IGHV3-30-3P0DP02 117 aa10.78□□□□□ -0.68
TRAFD1-203ENST00000547063 IGHV3-30-5P0DP03 117 aa10.78□□□□□ -0.68
TRAFD1-203ENST00000547063 PMVKQ15126 192 aa10.78□□□□□ -0.68
TRAFD1-203ENST00000547063 Q6ZUT4 128 aa10.78□□□□□ -0.68
TRAFD1-203ENST00000547063 BAALCQ8WXS3 180 aa10.78□□□□□ -0.68
TRAFD1-203ENST00000547063 IFITM10A6NMD0 228 aa10.77□□□□□ -0.69
TRAFD1-203ENST00000547063 LINC00173Q6ZV60 143 aa10.77□□□□□ -0.69
TRAFD1-203ENST00000547063 AMELXQ99217 191 aa10.77□□□□□ -0.69
TRAFD1-203ENST00000547063 OPRPNQ99935 248 aaPredicted RBP10.77□□□□□ -0.69
TRAFD1-203ENST00000547063 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
TRAFD1-203ENST00000547063 CCL25O15444 150 aa10.76□□□□□ -0.69
TRAFD1-203ENST00000547063 SPATA12Q7Z6I5 190 aa10.76□□□□□ -0.69
TRAFD1-203ENST00000547063 KLK12Q9UKR0 248 aa10.76□□□□□ -0.69
TRAFD1-203ENST00000547063 SYS1-DBNDD2H3BUS1 97 aa10.75□□□□□ -0.69
TRAFD1-203ENST00000547063 CRPP02741 224 aa10.75□□□□□ -0.69
TRAFD1-203ENST00000547063 AKR1D1P51857 326 aa10.75□□□□□ -0.69
TRAFD1-203ENST00000547063 KRTDAPP60985 99 aa10.75□□□□□ -0.69
TRAFD1-203ENST00000547063 TTC32Q5I0X7 151 aa10.75□□□□□ -0.69
TRAFD1-203ENST00000547063 PET117Q6UWS5 81 aa10.75□□□□□ -0.69
TRAFD1-203ENST00000547063 LINC00269Q8N2A0 174 aa10.75□□□□□ -0.69
TRAFD1-203ENST00000547063 FAM104AQ969W3 186 aa10.75□□□□□ -0.69
TRAFD1-203ENST00000547063 CST9LQ9H4G1 147 aa10.75□□□□□ -0.69
TRAFD1-203ENST00000547063 C20orf202A1L168 122 aa10.74□□□□□ -0.69
TRAFD1-203ENST00000547063 C3orf79P0CE67 100 aa10.74□□□□□ -0.69
TRAFD1-203ENST00000547063 SEC11AP67812 179 aa10.74□□□□□ -0.69
TRAFD1-203ENST00000547063 REG3AQ06141 175 aa10.74□□□□□ -0.69
TRAFD1-203ENST00000547063 Q8N3U1 123 aa10.74□□□□□ -0.69
TRAFD1-203ENST00000547063 OR10D4PQ8NGN7 298 aa10.74□□□□□ -0.69
TRAFD1-203ENST00000547063 PRR34Q9NV39 138 aa10.74□□□□□ -0.69
TRAFD1-203ENST00000547063 PRSS29PA6NIE9 313 aa10.73□□□□□ -0.69
TRAFD1-203ENST00000547063 H0Y8G0 127 aa10.73□□□□□ -0.69
TRAFD1-203ENST00000547063 SS18Q15532 418 aa10.73□□□□□ -0.69
TRAFD1-203ENST00000547063 RNASE13Q5GAN3 156 aaKnown RBP10.73□□□□□ -0.69
TRAFD1-203ENST00000547063 TRAV8-4A0A0B4J246 113 aa10.72□□□□□ -0.69
TRAFD1-203ENST00000547063 IBA57-AS1B1ANH7 110 aa10.72□□□□□ -0.69
TRAFD1-203ENST00000547063 MIAQ16674 131 aa10.72□□□□□ -0.69
TRAFD1-203ENST00000547063 LINC00476Q8WZB0 136 aa10.72□□□□□ -0.69
TRAFD1-203ENST00000547063 TENM2Q9NT68 2774 aa10.72□□□□□ -0.69
TRAFD1-203ENST00000547063 TRAV8-3A0A0A6YYJ7 113 aa10.71□□□□□ -0.69
TRAFD1-203ENST00000547063 TRAV13-1A0A0B4J241 112 aa10.71□□□□□ -0.69
TRAFD1-203ENST00000547063 LY6G6CO95867 125 aa10.71□□□□□ -0.69
TRAFD1-203ENST00000547063 UBE2WQ96B02 151 aa10.71□□□□□ -0.69
TRAFD1-203ENST00000547063 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.69
TRAFD1-203ENST00000547063 IGKV3OR2-268A0A0C4DH90 116 aa10.7□□□□□ -0.7
TRAFD1-203ENST00000547063 LINC00959A0A1B0GUT2 108 aa10.7□□□□□ -0.7
TRAFD1-203ENST00000547063 F8VRH5 84 aa10.7□□□□□ -0.7
TRAFD1-203ENST00000547063 UBE2D1P51668 147 aa10.7□□□□□ -0.7
TRAFD1-203ENST00000547063 ODF1Q14990 250 aa10.7□□□□□ -0.7
TRAFD1-203ENST00000547063 FAM19A3Q7Z5A8 133 aa10.7□□□□□ -0.7
TRAFD1-203ENST00000547063 RMI2Q96E14 147 aa10.7□□□□□ -0.7
TRAFD1-203ENST00000547063 NBDYA0A0U1RRE5 68 aa10.69□□□□□ -0.7
TRAFD1-203ENST00000547063 PLNP26678 52 aa10.69□□□□□ -0.7
TRAFD1-203ENST00000547063 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
TRAFD1-203ENST00000547063 LINC01545Q5VT33 79 aa10.69□□□□□ -0.7
TRAFD1-203ENST00000547063 CLPSL2Q6UWE3 100 aa10.69□□□□□ -0.7
TRAFD1-203ENST00000547063 ENHOQ6UWT2 76 aa10.69□□□□□ -0.7
TRAFD1-203ENST00000547063 TINCRA0A1B0GVN0 87 aa10.68□□□□□ -0.7
TRAFD1-203ENST00000547063 HERVK_113P63121 156 aa10.68□□□□□ -0.7
TRAFD1-203ENST00000547063 GEMIN7Q9H840 131 aaKnown RBP10.68□□□□□ -0.7
TRAFD1-203ENST00000547063 CSMD3Q7Z407 3707 aa10.68□□□□□ -0.7
TRAFD1-203ENST00000547063 DPM2O94777 84 aa10.67□□□□□ -0.7
TRAFD1-203ENST00000547063 IGLC3P0DOY3 106 aa10.67□□□□□ -0.7
TRAFD1-203ENST00000547063 MRPL35Q9NZE8 188 aaKnown RBP10.67□□□□□ -0.7
TRAFD1-203ENST00000547063 COX11Q9Y6N1 276 aa10.67□□□□□ -0.7
TRAFD1-203ENST00000547063 DNAH7Q8WXX0 4024 aa10.67□□□□□ -0.7
TRAFD1-203ENST00000547063 A0A0J9YXV3 536 aa10.66□□□□□ -0.7
TRAFD1-203ENST00000547063 SCGB1D1O95968 90 aa10.66□□□□□ -0.7
TRAFD1-203ENST00000547063 LINC00242Q5T6M2 205 aa10.66□□□□□ -0.7
TRAFD1-203ENST00000547063 NFE4Q86UQ8 179 aa10.66□□□□□ -0.7
TRAFD1-203ENST00000547063 CHCHD10Q8WYQ3 142 aaPredicted RBP10.66□□□□□ -0.7
TRAFD1-203ENST00000547063 CHAC1Q9BUX1 264 aa10.66□□□□□ -0.7
TRAFD1-203ENST00000547063 C1orf43Q9BWL3 253 aa10.66□□□□□ -0.7
TRAFD1-203ENST00000547063 IGKCP01834 107 aa10.65□□□□□ -0.7
TRAFD1-203ENST00000547063 CD164L2Q6UWJ8 174 aa10.65□□□□□ -0.7
TRAFD1-203ENST00000547063 TM2D2Q9BX73 214 aa10.65□□□□□ -0.7
TRAFD1-203ENST00000547063 IGLV4-69A0A075B6H9 119 aa10.64□□□□□ -0.71
TRAFD1-203ENST00000547063 JOSD1Q15040 202 aaPredicted RBP10.64□□□□□ -0.71
TRAFD1-203ENST00000547063 Q9HAA7 133 aa10.64□□□□□ -0.71
TRAFD1-203ENST00000547063 IGLV10-54A0A075B6I4 117 aa10.63□□□□□ -0.71
TRAFD1-203ENST00000547063 IGKV2D-24A0A075B6R9 120 aa10.63□□□□□ -0.71
TRAFD1-203ENST00000547063 LOC105371267A0A1B0GV96 52 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms