RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 NFE4Q86UQ8 179 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 NDUFA11Q86Y39 141 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 BBC3Q96PG8 261 aaPredicted RBP7.28□□□□□ -1.24
TRAF1-203ENST00000546084 PSMG3-AS1Q96PY0 264 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 PRO1854Q9UHT4 67 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 A0A0J9YX75 114 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 LINC01619G3V211 115 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 I3L3M4 83 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 NDUFA7O95182 113 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 PRORYQ9H606 182 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 FAM236AA0A1B0GUQ0 79 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 FAM236BA0A1B0GV22 79 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 TEN1Q86WV5 123 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 TMEM101Q96IK0 257 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 NDUFA12Q9UI09 145 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 PRO0461Q9UI25 63 aa7.27□□□□□ -1.25
TRAF1-203ENST00000546084 IGHV4-4A0A075B6R2 117 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 A0A0J9YY99 117 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 Q6ZSV7 163 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 SMR3AQ99954 134 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 PRIMA1Q86XR5 153 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 MUSTN1Q8IVN3 82 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 LENEPQ9Y5L5 61 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 FAM236DA0A1B0GTK5 79 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 FAM236CP0DP71 79 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 UNC79Q9P2D8 2635 aa7.26□□□□□ -1.25
TRAF1-203ENST00000546084 SLC25A20O43772 301 aa7.25□□□□□ -1.25
TRAF1-203ENST00000546084 SMCPP49901 116 aaPredicted RBP7.25□□□□□ -1.25
TRAF1-203ENST00000546084 NXPH4O95158 308 aa7.25□□□□□ -1.25
TRAF1-203ENST00000546084 COX6CP09669 75 aa7.25□□□□□ -1.25
TRAF1-203ENST00000546084 CFC1BP0CG36 223 aa7.25□□□□□ -1.25
TRAF1-203ENST00000546084 CFC1P0CG37 223 aa7.25□□□□□ -1.25
TRAF1-203ENST00000546084 INSP01308 110 aa7.25□□□□□ -1.25
TRAF1-203ENST00000546084 LINC00158P58513 81 aa7.25□□□□□ -1.25
TRAF1-203ENST00000546084 LRRC75A-AS1Q8N1F1 130 aa7.25□□□□□ -1.25
TRAF1-203ENST00000546084 CRIP2P52943 208 aaPredicted RBP7.24□□□□□ -1.25
TRAF1-203ENST00000546084 M0R2P5 195 aa7.24□□□□□ -1.25
TRAF1-203ENST00000546084 CRYGDP07320 174 aa7.24□□□□□ -1.25
TRAF1-203ENST00000546084 UBE2D1P51668 147 aa7.24□□□□□ -1.25
TRAF1-203ENST00000546084 TSPEAR-AS2P59090 65 aa7.24□□□□□ -1.25
TRAF1-203ENST00000546084 CIRBPQ14011 172 aaKnown RBP7.24□□□□□ -1.25
TRAF1-203ENST00000546084 S100A7L2Q5SY68 101 aa7.24□□□□□ -1.25
TRAF1-203ENST00000546084 Q6ZTI0 123 aa7.24□□□□□ -1.25
TRAF1-203ENST00000546084 DCANP1Q8TF63 244 aa7.24□□□□□ -1.25
TRAF1-203ENST00000546084 IGLV10-54A0A075B6I4 117 aa7.23□□□□□ -1.25
TRAF1-203ENST00000546084 CCL24O00175 119 aa7.23□□□□□ -1.25
TRAF1-203ENST00000546084 C5orf38Q86SI9 138 aa7.23□□□□□ -1.25
TRAF1-203ENST00000546084 NTN5Q8WTR8 489 aaPredicted RBP7.23□□□□□ -1.25
TRAF1-203ENST00000546084 RPL36AP83881 106 aaKnown RBP7.23□□□□□ -1.25
TRAF1-203ENST00000546084 RPL36ALQ969Q0 106 aaKnown RBP7.23□□□□□ -1.25
TRAF1-203ENST00000546084 TMEM141Q96I45 108 aa7.23□□□□□ -1.25
TRAF1-203ENST00000546084 TRAV4A0A0B4J268 109 aa7.23□□□□□ -1.25
TRAF1-203ENST00000546084 CDIP1Q9H305 208 aa7.23□□□□□ -1.25
TRAF1-203ENST00000546084 KLK5Q9Y337 293 aaPredicted RBP7.23□□□□□ -1.25
TRAF1-203ENST00000546084 K7EQG2 157 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 RHODO00212 210 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 TSHBP01222 138 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 SLC25A29Q8N8R3 303 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 CLEC2BQ92478 149 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 IGLV4-69A0A075B6H9 119 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 PSMB8P28062 276 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 DEFB113Q30KQ7 82 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 Q9H8V8 135 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 IGHV3-30P01768 117 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 IGHV3-30-5P0DP03 117 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 ATP6V0E2Q8NHE4 81 aa7.22□□□□□ -1.25
TRAF1-203ENST00000546084 ELANEP08246 267 aa7.21□□□□□ -1.25
TRAF1-203ENST00000546084 CARD19Q96LW7 228 aa7.21□□□□□ -1.25
TRAF1-203ENST00000546084 HIVEP1P15822 2718 aa7.21□□□□□ -1.25
TRAF1-203ENST00000546084 LOC100131303A0A0U1RQF7 123 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 IGIPA6NJ69 53 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 M0QY20 66 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 NDUFC2O95298 119 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 DSCR9P59020 149 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 IGHV4-31P0DP07 118 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 UBE2D3P61077 147 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 UBE2D2P62837 147 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 C2orf82Q6UX34 121 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 LINC00467Q9BRT7 94 aa7.21□□□□□ -1.26
TRAF1-203ENST00000546084 STAB1Q9NY15 2570 aa7.2□□□□□ -1.26
TRAF1-203ENST00000546084 PAX4O43316 350 aa7.2□□□□□ -1.26
TRAF1-203ENST00000546084 POLR2KP53803 58 aaKnown RBP7.2□□□□□ -1.26
TRAF1-203ENST00000546084 C4orf26Q17RF5 130 aa7.2□□□□□ -1.26
TRAF1-203ENST00000546084 TIMM17AQ99595 171 aa7.2□□□□□ -1.26
TRAF1-203ENST00000546084 IGHV3-30-3P0DP02 117 aa7.2□□□□□ -1.26
TRAF1-203ENST00000546084 Q6ZSN1 163 aa7.2□□□□□ -1.26
TRAF1-203ENST00000546084 C20orf203Q8NBC4 194 aa7.2□□□□□ -1.26
TRAF1-203ENST00000546084 CDKN2A-AS1Q9UH64 79 aa7.2□□□□□ -1.26
TRAF1-203ENST00000546084 H3BMM0 161 aa7.19□□□□□ -1.26
TRAF1-203ENST00000546084 CRLF1O75462 422 aa7.19□□□□□ -1.26
TRAF1-203ENST00000546084 XCL1P47992 114 aa7.19□□□□□ -1.26
TRAF1-203ENST00000546084 FHL3Q13643 280 aa7.19□□□□□ -1.26
TRAF1-203ENST00000546084 MRPL55Q7Z7F7 128 aaKnown RBP7.19□□□□□ -1.26
TRAF1-203ENST00000546084 KIR2DL5BQ8NHK3 375 aa7.19□□□□□ -1.26
TRAF1-203ENST00000546084 MAP6D1Q9H9H5 199 aa7.19□□□□□ -1.26
TRAF1-203ENST00000546084 ATXN8Q156A1 80 aa7.19□□□□□ -1.26
TRAF1-203ENST00000546084 PRO0628Q9UI54 55 aa7.19□□□□□ -1.26
TRAF1-203ENST00000546084 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
TRAF1-203ENST00000546084 APCP25054 2843 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms