RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.94□□□□□ -0.98
PAAF1-215ENST00000544909 TRGV1A0A0A0MS02 117 aa8.94□□□□□ -0.98
PAAF1-215ENST00000544909 IGKV2-29A2NJV5 120 aaPredicted RBP8.94□□□□□ -0.98
PAAF1-215ENST00000544909 SCGB1C2P0DMR2 95 aa8.94□□□□□ -0.98
PAAF1-215ENST00000544909 LINC01006Q8NI28 216 aa8.94□□□□□ -0.98
PAAF1-215ENST00000544909 ESM1Q9NQ30 184 aa8.94□□□□□ -0.98
PAAF1-215ENST00000544909 CENPEQ02224 2701 aa8.94□□□□□ -0.98
PAAF1-215ENST00000544909 TEX15Q9BXT5 2789 aa8.94□□□□□ -0.98
PAAF1-215ENST00000544909 TRBV6-4A0A1B0GX49 114 aa8.94□□□□□ -0.98
PAAF1-215ENST00000544909 ATXN8Q156A1 80 aa8.94□□□□□ -0.98
PAAF1-215ENST00000544909 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
PAAF1-215ENST00000544909 COX6CP09669 75 aa8.93□□□□□ -0.98
PAAF1-215ENST00000544909 KRTAP1-1Q07627 177 aa8.93□□□□□ -0.98
PAAF1-215ENST00000544909 CEMP1Q6PRD7 247 aaPredicted RBP8.93□□□□□ -0.98
PAAF1-215ENST00000544909 IGHV3-64A0A075B6Q5 118 aa8.92□□□□□ -0.98
PAAF1-215ENST00000544909 IGHV3OR16-12A0A075B7B8 117 aa8.92□□□□□ -0.98
PAAF1-215ENST00000544909 TRAV8-3A0A0A6YYJ7 113 aa8.92□□□□□ -0.98
PAAF1-215ENST00000544909 CITED2Q99967 270 aaPredicted RBP8.92□□□□□ -0.98
PAAF1-215ENST00000544909 Q9UF83 564 aa8.92□□□□□ -0.98
PAAF1-215ENST00000544909 CDKN2A-AS1Q9UH64 79 aa8.92□□□□□ -0.98
PAAF1-215ENST00000544909 TMEM262E9PQX1 116 aa8.91□□□□□ -0.98
PAAF1-215ENST00000544909 HERV-K104P63124 156 aa8.91□□□□□ -0.98
PAAF1-215ENST00000544909 ZNF418Q8TF45 676 aaPredicted RBP8.91□□□□□ -0.98
PAAF1-215ENST00000544909 ITPR3Q14573 2671 aa8.91□□□□□ -0.98
PAAF1-215ENST00000544909 APCP25054 2843 aa8.91□□□□□ -0.98
PAAF1-215ENST00000544909 EIF4EBP3O60516 100 aaPredicted RBP8.91□□□□□ -0.98
PAAF1-215ENST00000544909 PRM2P04554 102 aa8.91□□□□□ -0.98
PAAF1-215ENST00000544909 HILS1P60008 231 aa8.91□□□□□ -0.98
PAAF1-215ENST00000544909 LINC00242Q5T6M2 205 aa8.91□□□□□ -0.98
PAAF1-215ENST00000544909 TMEM101Q96IK0 257 aa8.91□□□□□ -0.98
PAAF1-215ENST00000544909 C19orf73Q9NVV2 129 aa8.91□□□□□ -0.98
PAAF1-215ENST00000544909 SLC25A20O43772 301 aa8.9□□□□□ -0.98
PAAF1-215ENST00000544909 SPINK8P0C7L1 97 aa8.9□□□□□ -0.98
PAAF1-215ENST00000544909 Q6ZTI0 123 aa8.9□□□□□ -0.98
PAAF1-215ENST00000544909 CDC42SE2Q9NRR3 84 aa8.9□□□□□ -0.98
PAAF1-215ENST00000544909 IGHV3-38A0A0C4DH36 116 aa8.89□□□□□ -0.99
PAAF1-215ENST00000544909 GIG44P09565 113 aaPredicted RBP8.89□□□□□ -0.99
PAAF1-215ENST00000544909 Q1RN00 199 aa8.89□□□□□ -0.99
PAAF1-215ENST00000544909 TMEM243Q9BU79 118 aa8.89□□□□□ -0.99
PAAF1-215ENST00000544909 PLAC8L1A1L4L8 177 aa8.89□□□□□ -0.99
PAAF1-215ENST00000544909 PRSS2P07478 247 aa8.89□□□□□ -0.99
PAAF1-215ENST00000544909 RPL13AP40429 203 aaKnown RBP8.89□□□□□ -0.99
PAAF1-215ENST00000544909 SFTA2Q6UW10 78 aa8.89□□□□□ -0.99
PAAF1-215ENST00000544909 CSNK1G2-AS1Q8NCQ2 148 aa8.89□□□□□ -0.99
PAAF1-215ENST00000544909 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
PAAF1-215ENST00000544909 H3BT86 120 aa8.88□□□□□ -0.99
PAAF1-215ENST00000544909 LINC01620Q4KN68 170 aa8.88□□□□□ -0.99
PAAF1-215ENST00000544909 RNASE13Q5GAN3 156 aaKnown RBP8.88□□□□□ -0.99
PAAF1-215ENST00000544909 ADAMTSL4-AS1Q5T5F5 129 aa8.88□□□□□ -0.99
PAAF1-215ENST00000544909 NTM-AS1Q6ZSK4 140 aa8.88□□□□□ -0.99
PAAF1-215ENST00000544909 MTURNQ8N3F0 131 aa8.88□□□□□ -0.99
PAAF1-215ENST00000544909 ANKRD29Q8N6D5 301 aa8.88□□□□□ -0.99
PAAF1-215ENST00000544909 ICOSQ9Y6W8 199 aa8.88□□□□□ -0.99
PAAF1-215ENST00000544909 TRBV10-2A0A0K0K1G8 114 aa8.87□□□□□ -0.99
PAAF1-215ENST00000544909 A0A1W2PRX2 142 aa8.87□□□□□ -0.99
PAAF1-215ENST00000544909 TLN2Q9Y4G6 2542 aa8.87□□□□□ -0.99
PAAF1-215ENST00000544909 EPG5Q9HCE0 2579 aa8.87□□□□□ -0.99
PAAF1-215ENST00000544909 UBE2L6O14933 153 aa8.87□□□□□ -0.99
PAAF1-215ENST00000544909 TRIAP1O43715 76 aa8.87□□□□□ -0.99
PAAF1-215ENST00000544909 ZNF625Q96I27 306 aaPredicted RBP8.87□□□□□ -0.99
PAAF1-215ENST00000544909 NOP10Q9NPE3 64 aaKnown RBP8.87□□□□□ -0.99
PAAF1-215ENST00000544909 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
PAAF1-215ENST00000544909 C9JAW5 83 aa8.86□□□□□ -0.99
PAAF1-215ENST00000544909 LINC00694P0DN24 101 aa8.86□□□□□ -0.99
PAAF1-215ENST00000544909 INSL3P51460 131 aa8.86□□□□□ -0.99
PAAF1-215ENST00000544909 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.86□□□□□ -0.99
PAAF1-215ENST00000544909 TRGV2A0A075B6R0 118 aa8.85□□□□□ -0.99
PAAF1-215ENST00000544909 F5H768 121 aa8.85□□□□□ -0.99
PAAF1-215ENST00000544909 PF4P02776 101 aa8.85□□□□□ -0.99
PAAF1-215ENST00000544909 KIR2DL5BQ8NHK3 375 aa8.85□□□□□ -0.99
PAAF1-215ENST00000544909 Q9H8V8 135 aa8.85□□□□□ -0.99
PAAF1-215ENST00000544909 LINC00612Q8N6U2 182 aa8.84□□□□□ -0.99
PAAF1-215ENST00000544909 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
PAAF1-215ENST00000544909 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
PAAF1-215ENST00000544909 CDIP1Q9H305 208 aa8.84□□□□□ -0.99
PAAF1-215ENST00000544909 FLNAP21333 2647 aaKnown RBP8.84□□□□□ -0.99
PAAF1-215ENST00000544909 LST1O00453 97 aa8.84□□□□□ -0.99
PAAF1-215ENST00000544909 C11orf44Q8N8P7 122 aa8.84□□□□□ -0.99
PAAF1-215ENST00000544909 GAGE12JA6NER3 117 aa8.83□□□□□ -1
PAAF1-215ENST00000544909 SMIM9A6NGZ8 99 aa8.83□□□□□ -1
PAAF1-215ENST00000544909 COX6A2Q02221 97 aa8.83□□□□□ -1
PAAF1-215ENST00000544909 GAGE4Q13068 117 aa8.83□□□□□ -1
PAAF1-215ENST00000544909 GAGE5Q13069 117 aa8.83□□□□□ -1
PAAF1-215ENST00000544909 FAM222AQ5U5X8 452 aa8.83□□□□□ -1
PAAF1-215ENST00000544909 SONP18583 2426 aaKnown RBP8.83□□□□□ -1
PAAF1-215ENST00000544909 CHD6Q8TD26 2715 aa8.82□□□□□ -1
PAAF1-215ENST00000544909 TRBV6-8A0A0A6YYG3 113 aa8.82□□□□□ -1
PAAF1-215ENST00000544909 TRGV4A0A0C4DH28 118 aa8.82□□□□□ -1
PAAF1-215ENST00000544909 J3QKU1 62 aa8.82□□□□□ -1
PAAF1-215ENST00000544909 PRIMA1Q86XR5 153 aa8.82□□□□□ -1
PAAF1-215ENST00000544909 TRAV13-1A0A0B4J241 112 aa8.81□□□□□ -1
PAAF1-215ENST00000544909 FAM240AA0A1B0GVK7 77 aa8.81□□□□□ -1
PAAF1-215ENST00000544909 A8MZ25 164 aa8.81□□□□□ -1
PAAF1-215ENST00000544909 H7C2G1 150 aa8.81□□□□□ -1
PAAF1-215ENST00000544909 GAGE7O76087 117 aa8.81□□□□□ -1
PAAF1-215ENST00000544909 GAGE12FP0CL80 117 aa8.81□□□□□ -1
PAAF1-215ENST00000544909 GAGE12GP0CL81 117 aa8.81□□□□□ -1
PAAF1-215ENST00000544909 GAGE12IP0CL82 117 aa8.81□□□□□ -1
PAAF1-215ENST00000544909 TRAV26-1A0A087WT03 109 aa8.8□□□□□ -1
PAAF1-215ENST00000544909 A0A1B0GV72 72 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms