RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 NDUFB1O75438 58 aa9.49□□□□□ -0.89
CHD4-211ENST00000544484 BBC3Q96PG8 261 aaPredicted RBP9.49□□□□□ -0.89
CHD4-211ENST00000544484 JMJD7-PLA2G4BH0Y9G9 81 aa9.49□□□□□ -0.89
CHD4-211ENST00000544484 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
CHD4-211ENST00000544484 COX7BP24311 80 aa9.49□□□□□ -0.89
CHD4-211ENST00000544484 FN1P02751 2386 aaKnown RBP9.49□□□□□ -0.89
CHD4-211ENST00000544484 A0A096LNI7 61 aa9.49□□□□□ -0.89
CHD4-211ENST00000544484 PIK3CD-AS1Q5SR53 167 aa9.49□□□□□ -0.89
CHD4-211ENST00000544484 TRBV6-8A0A0A6YYG3 113 aa9.48□□□□□ -0.89
CHD4-211ENST00000544484 MAPKAPK5-AS1Q8N8E1 139 aa9.48□□□□□ -0.89
CHD4-211ENST00000544484 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
CHD4-211ENST00000544484 A8MZ25 164 aa9.48□□□□□ -0.89
CHD4-211ENST00000544484 RNASE3P12724 160 aaKnown RBP9.48□□□□□ -0.89
CHD4-211ENST00000544484 XAGE1AQ9HD64 81 aa9.48□□□□□ -0.89
CHD4-211ENST00000544484 KRTAP10-9P60411 292 aa9.48□□□□□ -0.89
CHD4-211ENST00000544484 H3BT86 120 aa9.48□□□□□ -0.89
CHD4-211ENST00000544484 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
CHD4-211ENST00000544484 SMR3AQ99954 134 aa9.48□□□□□ -0.89
CHD4-211ENST00000544484 USP9YO00507 2555 aaPredicted RBP9.47□□□□□ -0.89
CHD4-211ENST00000544484 HILS1P60008 231 aa9.47□□□□□ -0.89
CHD4-211ENST00000544484 LOC100131303A0A0U1RQF7 123 aa9.47□□□□□ -0.89
CHD4-211ENST00000544484 TMEM223A0PJW6 202 aa9.47□□□□□ -0.89
CHD4-211ENST00000544484 TMEM256-PLSCR3K7ERE1 68 aa9.47□□□□□ -0.89
CHD4-211ENST00000544484 EDN2P20800 178 aa9.47□□□□□ -0.89
CHD4-211ENST00000544484 GAS8-AS1O95177 125 aa9.46□□□□□ -0.89
CHD4-211ENST00000544484 SHISA2Q6UWI4 295 aa9.46□□□□□ -0.89
CHD4-211ENST00000544484 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.46□□□□□ -0.89
CHD4-211ENST00000544484 LINC00526Q96FQ7 95 aa9.46□□□□□ -0.89
CHD4-211ENST00000544484 CITED1Q99966 193 aa9.46□□□□□ -0.9
CHD4-211ENST00000544484 MIFP14174 115 aa9.46□□□□□ -0.9
CHD4-211ENST00000544484 SS18L2Q9UHA2 77 aa9.46□□□□□ -0.9
CHD4-211ENST00000544484 IGLV1-40P01703 118 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 PTPRSQ13332 1948 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 TRBV6-4A0A1B0GX49 114 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 LRP4O75096 1905 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 SLPIP03973 132 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 SPATA25Q9BR10 227 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 RNF183Q96D59 192 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 CHD8Q9HCK8 2581 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 SPTBN4Q9H254 2564 aa9.45□□□□□ -0.9
CHD4-211ENST00000544484 YPEL4Q96NS1 127 aa9.44□□□□□ -0.9
CHD4-211ENST00000544484 U3KQK5 164 aa9.44□□□□□ -0.9
CHD4-211ENST00000544484 TRBV27A0A0K0K1C4 114 aa9.43□□□□□ -0.9
CHD4-211ENST00000544484 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
CHD4-211ENST00000544484 H0Y9J4 135 aa9.43□□□□□ -0.9
CHD4-211ENST00000544484 RBX1P62877 108 aa9.43□□□□□ -0.9
CHD4-211ENST00000544484 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
CHD4-211ENST00000544484 A0A1W2PPR1 153 aa9.43□□□□□ -0.9
CHD4-211ENST00000544484 NRACQ8N912 160 aa9.43□□□□□ -0.9
CHD4-211ENST00000544484 LRCOL1A6NCL2 159 aa9.43□□□□□ -0.9
CHD4-211ENST00000544484 H3BQ85 93 aa9.43□□□□□ -0.9
CHD4-211ENST00000544484 KLLNB2CW77 178 aa9.42□□□□□ -0.9
CHD4-211ENST00000544484 TSHBP01222 138 aa9.42□□□□□ -0.9
CHD4-211ENST00000544484 IGLV2-18A0A075B6J9 118 aa9.42□□□□□ -0.9
CHD4-211ENST00000544484 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.42□□□□□ -0.9
CHD4-211ENST00000544484 IL17DQ8TAD2 202 aa9.42□□□□□ -0.9
CHD4-211ENST00000544484 ATOX1O00244 68 aa9.42□□□□□ -0.9
CHD4-211ENST00000544484 MP68P56378 58 aa9.42□□□□□ -0.9
CHD4-211ENST00000544484 H7C423 109 aa9.42□□□□□ -0.9
CHD4-211ENST00000544484 C5orf47Q569G3 176 aa9.42□□□□□ -0.9
CHD4-211ENST00000544484 B9D2Q9BPU9 175 aa9.42□□□□□ -0.9
CHD4-211ENST00000544484 A0A087WZ39 114 aa9.41□□□□□ -0.9
CHD4-211ENST00000544484 TEX49A0A1B0GTD5 131 aa9.41□□□□□ -0.9
CHD4-211ENST00000544484 OXLD1Q5BKU9 147 aa9.41□□□□□ -0.9
CHD4-211ENST00000544484 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
CHD4-211ENST00000544484 WFDC9Q8NEX5 89 aa9.41□□□□□ -0.9
CHD4-211ENST00000544484 C14orf177Q52M58 125 aa9.41□□□□□ -0.9
CHD4-211ENST00000544484 FAM19A1Q7Z5A9 133 aa9.41□□□□□ -0.9
CHD4-211ENST00000544484 ATG2AQ2TAZ0 1938 aa9.41□□□□□ -0.9
CHD4-211ENST00000544484 PLA2G2AP14555 144 aa9.4□□□□□ -0.9
CHD4-211ENST00000544484 G3V4G9 280 aa9.4□□□□□ -0.9
CHD4-211ENST00000544484 IBA57-AS1B1ANH7 110 aa9.4□□□□□ -0.91
CHD4-211ENST00000544484 TRBV6-5A0A0K0K1A5 114 aa9.4□□□□□ -0.91
CHD4-211ENST00000544484 KPRPQ5T749 579 aaPredicted RBP9.39□□□□□ -0.91
CHD4-211ENST00000544484 TMEM258P61165 79 aa9.39□□□□□ -0.91
CHD4-211ENST00000544484 ZNF462Q96JM2 2506 aa9.39□□□□□ -0.91
CHD4-211ENST00000544484 TRIAP1O43715 76 aa9.39□□□□□ -0.91
CHD4-211ENST00000544484 CLUHP3Q96NS8 147 aa9.39□□□□□ -0.91
CHD4-211ENST00000544484 M0R2N4 97 aa9.38□□□□□ -0.91
CHD4-211ENST00000544484 CHKB-CPT1BH3BT56 60 aa9.38□□□□□ -0.91
CHD4-211ENST00000544484 SYCNQ0VAF6 134 aa9.38□□□□□ -0.91
CHD4-211ENST00000544484 LRRK2Q5S007 2527 aa9.38□□□□□ -0.91
CHD4-211ENST00000544484 C6orf99Q4VX62 202 aa9.38□□□□□ -0.91
CHD4-211ENST00000544484 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
CHD4-211ENST00000544484 TRAV23DV6A0A075B6W5 121 aa9.38□□□□□ -0.91
CHD4-211ENST00000544484 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
CHD4-211ENST00000544484 POLR2KP53803 58 aaKnown RBP9.37□□□□□ -0.91
CHD4-211ENST00000544484 PYGO1Q9Y3Y4 419 aa9.37□□□□□ -0.91
CHD4-211ENST00000544484 IGKV2-28A0A075B6P5 120 aa9.37□□□□□ -0.91
CHD4-211ENST00000544484 IGKV2D-28P01615 120 aa9.37□□□□□ -0.91
CHD4-211ENST00000544484 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
CHD4-211ENST00000544484 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
CHD4-211ENST00000544484 BPY2O14599 106 aa9.36□□□□□ -0.91
CHD4-211ENST00000544484 SPANXB1Q9NS25 103 aaPredicted RBP9.36□□□□□ -0.91
CHD4-211ENST00000544484 PKD1L2Q7Z442 2459 aa9.36□□□□□ -0.91
CHD4-211ENST00000544484 ODF3L2Q3SX64 289 aa9.36□□□□□ -0.91
CHD4-211ENST00000544484 PDE6GP18545 87 aa9.35□□□□□ -0.91
CHD4-211ENST00000544484 RAI1Q7Z5J4 1906 aaPredicted RBP9.35□□□□□ -0.91
CHD4-211ENST00000544484 LINC00959A0A1B0GUT2 108 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms